MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Limb_E15.5_H3K9me3_85_167_0.503_4.93737e-05 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.001 0.997 0.001 0.001 0.196 0.732 0.001 0.071 0.001 0.001 0.001 0.997 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.975 0.001 0.023 0.001 0.001 0.001 0.997 0.001 MOTIF Liver_P0_H3K9me3_85_177_0.512_4.638015e-09 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.001 0.997 0.001 0.001 0.325 0.673 0.001 0.001 0.001 0.001 0.001 0.997 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 MOTIF Limb_E12.5_H3K9me3_108_172_0.512_9.230294e-34 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.659 0.001 0.332 0.008 0.961 0.001 0.009 0.029 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.848 0.01 0.141 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.995 0.003 0.997 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 0.012 0.001 0.986 0.001 MOTIF Forebrain_E15.5_H3K9me3_109_162_0.505_0.02194627 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.014 0.001 0.984 0.102 0.001 0.896 0.001 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.049 0.001 0.949 MOTIF Forebrain_E12.5_H3K9me3_92_168_0.510_5.58745e-15 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.913 0.001 0.085 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.995 0.003 0.997 0.001 0.001 0.001 0.001 0.956 0.004 0.039 0.995 0.003 0.001 0.001 0.001 0.001 0.997 0.001 0.092 0.001 0.906 0.001 MOTIF Forebrain_E13.5_H3K9me3_105_164_0.507_5.418047e-13 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.93 0.001 0.068 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.996 0.002 0.98 0.018 0.001 0.001 0.001 0.997 0.001 0.001 0.996 0.002 0.001 0.001 0.001 0.001 0.997 0.001 0.138 0.001 0.86 0.001 MOTIF Hindbrain_E13.5_H3K9me3_100_165_0.511_1.408046e-18 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.878 0.001 0.12 0.001 0.962 0.001 0.036 0.001 0.001 0.001 0.997 0.033 0.001 0.965 0.001 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.056 0.001 0.942 0.001 0.001 0.059 0.001 0.939 MOTIF Liver_E13.5_H3K9me3_77_167_0.502_0.1580788 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.046 0.001 0.001 0.952 0.011 0.987 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 MOTIF Liver_E11.5_H3K9me3_80_162_0.506_0.01739911 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.001 0.971 0.001 0.027 0.971 0.027 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.001 MOTIF Midbrain_E14.5_H3K9me3_110_167_0.502_0.1319809 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.987 0.001 0.001 0.011 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.001 MOTIF Midbrain_E15.5_H3K9me3_110_164_0.502_0.0002362855 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.519 0.293 0.187 0.001 0.997 0.001 0.001 0.001 0.005 0.001 0.993 0.067 0.001 0.931 0.001 0.046 0.001 0.001 0.952 0.005 0.993 0.001 0.001 0.001 0.001 0.126 0.872 0.09 0.356 0.001 0.553 0.777 0.069 0.153 0.001 0.001 0.126 0.872 0.001 0.001 0.118 0.88 0.001 0.001 0.213 0.001 0.785 MOTIF Kidney_E15.5_H3K9me3_83_159_0.509_0.0001316692 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.065 0.086 0.848 0.001 0.049 0.907 0.043 0.001 0.001 0.997 0.001 0.001 0.043 0.1 0.001 0.856 0.042 0.001 0.956 0.001 0.395 0.001 0.001 0.603 0.178 0.736 0.043 0.043 0.043 0.043 0.001 0.913 0.001 0.001 0.28 0.718 0.475 0.481 0.043 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.761 0.237