MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Hindbrain_P0_H3K27me3_31_161_0.520_8.529996e-10
letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1
0.016	0.035	0.066	0.883
0.053	0.069	0.075	0.803
0.088	0.788	0.057	0.067
0.088	0.033	0.789	0.09
0.068	0.834	0.038	0.06
0.802	0.053	0.095	0.05
0.001	0.038	0.902	0.059
0.086	0.778	0.067	0.069
0.037	0.079	0.733	0.151
0.048	0.891	0.06	0.001
0.882	0.045	0.037	0.036
0.015	0.025	0.922	0.038

MOTIF	Intestine_E15.5_H3K27me3_21_41_0.534_2.450924e-17
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.082007	0.690922	0.220884	0.006186
0.048817	0.080371	0.009888	0.860923
0.004599	0.051786	0.915537	0.028079
0.025644	0.887944	0.038535	0.047877
0.012538	0.039615	0.750338	0.197508
0.089797	0.617277	0.283327	0.009599
0.093796	0.034666	0.045145	0.826393
0.014	0.032054	0.931272	0.022675
0.009929	0.735015	0.052191	0.202865

MOTIF	Intestine_P0_H3K27me3_21_63_0.541_1.245655e-36
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.091131	0.908869	0.0	0.0
0.380323	0.051796	0.547044	0.020836
0.112116	0.796521	0.091363	0.0
0.924919	0.075081	0.0	0.0
0.010363	0.120823	0.860908	0.007905
0.0	0.954651	0.030415	0.014933
0.112628	0.0	0.872578	0.014794
0.107994	0.663005	0.225553	0.003449
0.860546	0.0	0.0	0.139454

MOTIF	Liver_E16.5_H3K27me3_15_17_0.585_3.213763e-99
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.088082	0.892321	0.019597	0.0
0.106265	0.026979	0.083606	0.78315
0.011742	0.027626	0.895689	0.064943
0.221928	0.717574	0.04606	0.014438
0.024203	0.015282	0.894649	0.065867
0.035483	0.890533	0.019799	0.054185
0.02847	0.643417	0.060348	0.267765
0.133829	0.047753	0.786362	0.032056
0.008438	0.886862	0.054361	0.050338

MOTIF	Limb_E13.5_H3K4me2_20_28_0.626_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.951555	0.048445	0.0
0.197405	0.007422	0.795173	0.0
0.216042	0.673386	0.077719	0.032853
0.025956	0.020754	0.862266	0.091024
0.043765	0.052839	0.751549	0.151847
0.0	0.777067	0.077242	0.14569
0.200326	0.016394	0.768003	0.015276
0.0	0.937867	0.052054	0.010078
0.79471	0.059792	0.030442	0.115057

MOTIF	Liver_E15.5_H3K4me2_32_20_0.592_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.976912	0.023088	0.0
0.060388	0.011608	0.062156	0.865848
0.003848	0.060252	0.886073	0.049826
0.07961	0.870373	0.032894	0.017123
0.017554	0.068647	0.902169	0.011631
0.157022	0.818165	0.018566	0.006247
0.065574	0.400823	0.078775	0.454828
0.0	0.088575	0.900416	0.011009
0.009963	0.760695	0.030608	0.198733
0.0	0.024581	0.944954	0.030465

MOTIF	Forebrain_E13.5_H3K4me3_8_44_0.733_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.082942	0.843432	0.038184	0.035442
0.034891	0.0	0.965109	0.0
0.128139	0.761589	0.037515	0.072756
0.271701	0.019587	0.686985	0.021727
0.059091	0.022863	0.697511	0.220535
0.03104	0.897523	0.0537	0.017737
0.04396	0.027483	0.882538	0.046019
0.011769	0.851351	0.005922	0.130959
0.796049	0.019258	0.0	0.184692

MOTIF	Heart_E15.5_H3K4me3_21_42_0.674_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.789458	0.112661	0.097881
0.173514	0.0	0.816603	0.009883
0.213789	0.549345	0.019587	0.217279
0.061304	0.040955	0.8829	0.014841
0.05115	0.013778	0.784954	0.150117
0.053388	0.847438	0.061104	0.03807
0.037511	0.0	0.950945	0.011544
0.0673	0.856683	0.0346	0.041417
0.832064	0.080918	0.011196	0.075822

MOTIF	Heart_E12.5_H3K4me3_31_22_0.649_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.080806	0.883049	0.036145	0.0
0.123478	0.021397	0.059072	0.796054
0.020038	0.062327	0.857122	0.060513
0.034311	0.79829	0.024847	0.142553
0.026026	0.014122	0.910387	0.049465
0.091595	0.779232	0.0413	0.087872
0.201253	0.694969	0.078575	0.025202
0.197048	0.062319	0.697986	0.042647
0.057486	0.884346	0.03851	0.019658
0.015431	0.658475	0.223102	0.102993

MOTIF	Kidney_P0_H3K4me3_17_26_0.693_2.001e-318
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.008123	0.971419	0.020458	0.0
0.138865	0.028834	0.0	0.832301
0.03576	0.093025	0.844344	0.026871
0.039411	0.889621	0.01863	0.052338
0.215392	0.050594	0.715086	0.018929
0.092989	0.781586	0.042806	0.082619
0.052142	0.727914	0.033865	0.186078
0.012571	0.022041	0.942075	0.023314
0.311629	0.64141	0.019309	0.027652
0.086643	0.173948	0.681289	0.058119

MOTIF	Midbrain_E16.5_H3K4me3_27_29_0.671_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.011053	0.958674	0.030273	0.0
0.093254	0.043816	0.051944	0.810985
0.009168	0.013446	0.91353	0.063856
0.105227	0.736014	0.03259	0.126169
0.131263	0.030276	0.647277	0.191184
0.015756	0.923245	0.023918	0.037081
0.056939	0.840111	0.032393	0.070557
0.020145	0.052008	0.765074	0.162773
0.193432	0.689486	0.106727	0.010355
0.097459	0.243795	0.658746	0.0

MOTIF	Stomach_E14.5_H3K4me3_20_15_0.707_9.717301e-316
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.039606	0.933755	0.026639	0.0
0.142809	0.044259	0.006311	0.806621
0.020913	0.021843	0.86225	0.094994
0.09556	0.735142	0.086026	0.083272
0.127516	0.050578	0.787795	0.034111
0.026508	0.920383	0.029566	0.023544
0.158327	0.611077	0.180136	0.05046
0.018314	0.067111	0.812222	0.102354
0.071916	0.781572	0.052472	0.09404
0.067547	0.352053	0.546651	0.033749