MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Forebrain_P0_H3K9me3_59_119_0.521_6.818323e-07 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.932439 0.022429 0.02033 0.024802 0.865946 0.0 0.064471 0.069583 0.006841 0.033732 0.083301 0.876126 0.004881 0.15973 0.396761 0.438629 0.0 0.908119 0.06178 0.030101 0.911463 0.004179 0.006898 0.07746 0.049942 0.0 0.924787 0.02527 0.038453 0.0 0.0 0.961547 0.0 0.808248 0.191752 0.0 MOTIF Hindbrain_P0_H3K9me3_71_134_0.515_1.233787e-05 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.874901 0.0 0.0 0.125099 0.602172 0.021205 0.376623 0.0 0.0 0.05181 0.0 0.94819 0.0 0.076863 0.150205 0.772932 0.0 0.977123 0.0 0.022877 0.971797 0.012073 0.01613 0.0 0.0 0.0 0.977273 0.022727 0.0 0.0 0.0 1.0 0.072462 0.461296 0.288429 0.177812 MOTIF Midbrain_E14.5_H3K9me3_38_153_0.521_9.129397e-19 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.03 0.136 0.107 0.727 0.129 0.245 0.524 0.102 0.767 0.069 0.158 0.006 0.18 0.591 0.033 0.196 0.148 0.035 0.02 0.797 0.079 0.04 0.834 0.047 0.705 0.081 0.162 0.052 0.815 0.1 0.042 0.043 0.019 0.318 0.01 0.653 0.02 0.043 0.023 0.914 0.106 0.014 0.873 0.007 0.324 0.47 0.071 0.134 MOTIF Midbrain_E16.5_H3K9me3_32_151_0.523_1.32769e-37 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.16 0.696 0.001 0.143 0.997 0.001 0.001 0.001 0.686 0.001 0.293 0.02 0.001 0.001 0.001 0.997 0.001 0.171 0.142 0.686 0.067 0.832 0.001 0.1 0.997 0.001 0.001 0.001 0.337 0.021 0.503 0.139 0.001 0.001 0.054 0.944 0.127 0.537 0.311 0.025 0.997 0.001 0.001 0.001 0.001 0.001 0.902 0.096 MOTIF Neural-Tube_E15.5_H3K9me3_43_151_0.524_4.302989e-11 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.261 0.634 0.039 0.066 0.04 0.117 0.077 0.766 0.22 0.283 0.458 0.039 0.765 0.078 0.156 0.001 0.078 0.842 0.002 0.078 0.001 0.219 0.001 0.779 0.22 0.262 0.479 0.039 0.952 0.046 0.001 0.001 0.921 0.001 0.001 0.077 0.001 0.049 0.001 0.949 0.039 0.077 0.077 0.807 0.039 0.078 0.881 0.002 MOTIF Midbrain_E15.5_H3K9me3_46_154_0.525_2.189033e-09 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.228 0.722 0.001 0.049 0.001 0.001 0.001 0.997 0.104 0.291 0.604 0.001 0.997 0.001 0.001 0.001 0.029 0.631 0.001 0.339 0.001 0.137 0.001 0.861 0.001 0.001 0.997 0.001 0.795 0.099 0.105 0.001 0.95 0.001 0.048 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.061 0.937 0.001 MOTIF Forebrain_E14.5_H3K9me3_60_158_0.513_9.870923e-11 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.129 0.858 0.005 0.008 0.001 0.007 0.001 0.991 0.009 0.268 0.698 0.025 0.971 0.009 0.019 0.001 0.001 0.977 0.004 0.018 0.035 0.001 0.008 0.956 0.092 0.008 0.899 0.001 0.961 0.014 0.024 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.014 0.975 0.01 MOTIF Forebrain_E12.5_H3K9me3_118_157_0.502_1.514439e-09 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.095 0.899 0.001 0.005 0.001 0.002 0.001 0.996 0.009 0.22 0.729 0.042 0.996 0.001 0.001 0.002 0.003 0.974 0.003 0.02 0.001 0.002 0.001 0.996 0.004 0.001 0.994 0.001 0.97 0.009 0.02 0.001 0.997 0.001 0.001 0.001 0.001 0.021 0.006 0.972 0.001 0.002 0.001 0.996 0.026 0.001 0.972 0.001 MOTIF Hindbrain_E14.5_H3K9me3_81_153_0.515_9.477787e-47 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.169 0.824 0.001 0.006 0.002 0.002 0.001 0.995 0.024 0.219 0.734 0.023 0.962 0.013 0.024 0.001 0.01 0.956 0.001 0.033 0.001 0.002 0.002 0.995 0.019 0.004 0.976 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.013 0.001 0.974 0.012 MOTIF Heart_E16.5_H3K9me3_92_161_0.514_1.440951e-21 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.987 0.011 0.001 0.997 0.001 0.001 0.001 0.963 0.001 0.035 0.001 0.011 0.001 0.001 0.987 0.001 0.015 0.019 0.965 0.005 0.991 0.003 0.001 0.995 0.001 0.003 0.001 0.018 0.001 0.98 0.001 0.001 0.023 0.019 0.957 0.032 0.684 0.275 0.009 0.997 0.001 0.001 0.001 0.027 0.001 0.92 0.052 MOTIF Limb_E14.5_H3K9me3_92_162_0.506_2.52197e-15 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.116 0.869 0.014 0.001 0.001 0.001 0.001 0.997 0.018 0.354 0.619 0.009 0.976 0.006 0.017 0.001 0.014 0.956 0.001 0.029 0.001 0.001 0.005 0.993 0.008 0.006 0.985 0.001 0.964 0.024 0.011 0.001 0.993 0.001 0.005 0.001 0.001 0.03 0.001 0.968 0.001 0.006 0.01 0.983 0.001 0.005 0.993 0.001 MOTIF Forebrain_E15.5_H3K9me3_107_164_0.506_0.006892122 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.028 0.016 0.736 0.22 0.001 0.993 0.005 0.001 0.994 0.004 0.001 0.001 0.994 0.001 0.004 0.001 0.001 0.001 0.001 0.997 0.001 0.005 0.012 0.982 0.001 0.939 0.001 0.059 0.969 0.001 0.017 0.013 0.005 0.001 0.993 0.001 0.001 0.02 0.012 0.967 0.001 0.742 0.25 0.007 0.997 0.001 0.001 0.001 MOTIF Stomach_E16.5_H3K9me3_66_166_0.517_1.931847e-12 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.006 0.001 0.992 0.001 0.295 0.703 0.001 0.987 0.006 0.006 0.001 0.022 0.951 0.001 0.026 0.026 0.006 0.001 0.967 0.01 0.001 0.988 0.001 0.992 0.001 0.006 0.001 0.997 0.001 0.001 0.001 0.004 0.06 0.007 0.929 0.001 0.001 0.001 0.997 0.011 0.004 0.984 0.001 0.136 0.799 0.005 0.06