MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Limb_E15.5_H3K4me3_70_121_0.557_1.708771e-149
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.832999	0.105297	0.0	0.061704
0.0	0.0	0.956458	0.043542
0.192417	0.799106	0.002616	0.005861
0.021514	0.041968	0.0	0.936517
0.01177	0.888512	0.092782	0.006936
0.006804	0.643616	0.343403	0.006177
0.334199	0.0	0.658182	0.007619
0.011066	0.052435	0.932654	0.003844
0.794872	0.021131	0.054547	0.12945

MOTIF	Cranio-Facial_E11.5_H3K4me3_76_125_0.547_4.286154e-46
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.044478	0.01447	0.913955	0.027096
0.07427	0.828433	0.071376	0.025922
0.153309	0.540072	0.027698	0.27892
0.008304	0.858525	0.049751	0.083421
0.220161	0.483474	0.048552	0.247812
0.021561	0.0	0.974151	0.004287
0.0	0.0	1.0	0.0
0.940575	0.0	0.059425	0.0
0.824048	0.136518	0.0	0.039434

MOTIF	Intestine_P0_H3K4me3_93_111_0.516_1.133518e-22
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.879581	0.015405	0.07346	0.031554
0.04527	0.018659	0.92207	0.014
0.029792	0.75159	0.010831	0.207787
0.146326	0.698345	0.121438	0.033891
0.026127	0.914806	0.018188	0.04088
0.217646	0.54225	0.067166	0.172938
0.134742	0.022619	0.842639	0.0
0.007672	0.03963	0.950317	0.002381
0.853262	0.031508	0.065225	0.050004

MOTIF	Midbrain_E12.5_H3K4me3_83_93_0.526_6.437951e-30
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.901492	0.016933	0.022313	0.059262
0.031964	0.041844	0.897361	0.02883
0.160806	0.776604	0.017474	0.045117
0.170822	0.612984	0.102338	0.113856
0.099704	0.872619	0.01006	0.017617
0.19197	0.699781	0.046112	0.062137
0.123279	0.028087	0.842919	0.005715
0.0	0.012141	0.978166	0.009692
0.876159	0.028434	0.055319	0.040087
0.404302	0.281507	0.293263	0.020929

MOTIF	Neural-Tube_E11.5_H3K4me3_83_124_0.563_6.633939e-103
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.856603	0.0	0.078758	0.064639
0.013064	0.0	0.93868	0.048256
0.062092	0.845503	0.0	0.092405
0.03111	0.694053	0.0	0.274837
0.123159	0.598734	0.0	0.278107
0.039012	0.884058	0.0	0.07693
0.056009	0.0	0.939417	0.004574
0.0	0.083771	0.916229	0.0
0.912292	0.0	0.0	0.087708

MOTIF	Stomach_E15.5_H3K4me3_67_93_0.580_9.185941e-144
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.879278	0.053223	0.0	0.067499
0.070834	0.022419	0.898721	0.008027
0.061248	0.754348	0.0	0.184404
0.021984	0.427104	0.0	0.550912
0.120039	0.787304	0.042737	0.049921
0.02809	0.903399	0.0	0.068511
0.048111	0.0	0.951889	0.0
0.0	0.0	0.995481	0.004519
0.894775	0.018539	0.061876	0.02481
0.914124	0.0	0.070219	0.015658

MOTIF	Cranio-Facial_E13.5_H3K4me3_50_74_0.613_3.28001e-310
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.055739	0.020415	0.866091	0.057755
0.0	0.791026	0.203153	0.005822
0.388408	0.0	0.0	0.611592
0.0	0.954007	0.045993	0.0
0.045164	0.921184	0.024453	0.0092
0.0	0.025269	0.961404	0.013327
0.0	0.064272	0.781396	0.154332
0.834212	0.0	0.044009	0.121778
0.044109	0.758083	0.197809	0.0
0.385408	0.035435	0.183996	0.395161

MOTIF	Forebrain_E14.5_H3K4me3_76_123_0.555_2.640125e-136
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.663689	0.0	0.160386	0.175925
0.0505	0.256342	0.518266	0.174893
0.131722	0.855249	0.013029	0.0
0.011968	0.080627	0.034332	0.873073
0.002808	0.97774	0.019452	0.0
0.177183	0.757647	0.035605	0.029565
0.042643	0.0	0.948606	0.008751
0.0	0.018483	0.961949	0.019568
0.836483	0.0	0.0	0.163517

MOTIF	Forebrain_E12.5_H3K4me3_45_70_0.624_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.24337	0.221434	0.426692	0.108504
0.119701	0.0931	0.605371	0.181827
0.0	0.956424	0.018056	0.02552
0.043744	0.071544	0.048652	0.836061
0.107561	0.822363	0.070076	0.0
0.015351	0.825151	0.110913	0.048584
0.061571	0.0	0.938429	0.0
0.0	0.01554	0.968469	0.015991
0.946825	0.0	0.0	0.053175

MOTIF	Hindbrain_E13.5_H3K4me3_72_83_0.572_3.241993e-226
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.155766	0.085706	0.54034	0.218188
0.15861	0.010749	0.675743	0.154898
0.029218	0.940356	0.014483	0.015943
0.036422	0.062257	0.02206	0.87926
0.126775	0.75127	0.078253	0.043701
0.016359	0.934864	0.006958	0.04182
0.31366	0.006537	0.67917	0.000634
0.0	0.011103	0.987397	0.001499
0.818176	0.088721	0.054594	0.038509

MOTIF	Cranio-Facial_E11.5_H3K4me3_71_85_0.564_1.987547e-159
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.196184	0.011619	0.770147	0.02205
0.049333	0.044851	0.856865	0.048951
0.088936	0.787351	0.030962	0.092751
0.118568	0.069331	0.046163	0.765937
0.011056	0.939113	0.036527	0.013303
0.023994	0.72008	0.032964	0.222961
0.165622	0.016272	0.803606	0.0145
0.01716	0.054865	0.926194	0.001781
0.91517	0.032764	0.025206	0.02686

MOTIF	Hindbrain_P0_H3K4me3_60_68_0.589_1.35728e-265
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.067539	0.67349	0.150752	0.108219
0.089981	0.103931	0.047866	0.758222
0.019942	0.934195	0.044774	0.001089
0.070354	0.784468	0.022563	0.122615
0.150057	0.048547	0.78939	0.012006
0.025187	0.113581	0.819807	0.041426
0.872098	0.021279	0.085806	0.020817
0.026136	0.035151	0.93154	0.007174
0.211503	0.668941	0.033645	0.085911

MOTIF	Midbrain_E16.5_H3K4me3_66_92_0.580_2.965143e-132
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.036125	0.068377	0.844928	0.050571
0.252772	0.106298	0.461542	0.179388
0.0	0.755136	0.165278	0.079586
0.075073	0.025139	0.017269	0.882519
0.045652	0.882995	0.034593	0.03676
0.015949	0.950614	0.0	0.033437
0.208352	0.015395	0.765414	0.010838
0.0	0.0	0.995352	0.004648
0.861701	0.097204	0.0	0.041095