MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Midbrain_E11.5_H3K4me2_84_105_0.544_3.936933e-158
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.902014	0.0	0.067609	0.030377
0.0	0.013387	0.986613	0.0
0.039312	0.012992	0.882408	0.065289
0.901665	0.078292	0.020044	0.0
0.011945	0.956071	0.012747	0.019237
0.055668	0.450271	0.132223	0.361837
0.195596	0.776134	0.011255	0.017015
0.029606	0.016475	0.947709	0.00621
0.029238	0.204221	0.766542	0.0

MOTIF	Hindbrain_E16.5_H3K4me2_103_117_0.505_8.508469e-74
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.880022	0.026687	0.077087	0.016205
0.0	0.045977	0.954023	0.0
0.04916	0.079916	0.700103	0.170821
0.815919	0.037359	0.024632	0.12209
0.040204	0.873696	0.015472	0.070628
0.048693	0.906839	0.031485	0.012984
0.134187	0.52931	0.173747	0.162756
0.047761	0.062796	0.879475	0.009967
0.037947	0.0	0.959614	0.002439

MOTIF	Lung_P0_H3K4me2_80_95_0.514_1.954183e-40
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.725577	0.064079	0.069257	0.141087
0.033261	0.014874	0.903834	0.04803
0.28292	0.061336	0.62866	0.027084
0.857827	0.040323	0.089329	0.012521
0.125574	0.827235	0.0	0.047191
0.030408	0.875242	0.03632	0.058029
0.042646	0.69603	0.07762	0.183703
0.008193	0.0	0.828217	0.16359
0.0	0.026654	0.973346	0.0

MOTIF	Neural-Tube_E11.5_H3K4me2_81_62_0.524_3.19605e-67
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.191569	0.100111	0.308858	0.399461
0.005077	0.901294	0.039065	0.054564
0.010644	0.874786	0.080626	0.033944
0.021989	0.693229	0.007636	0.277146
0.033695	0.020809	0.850199	0.095297
0.028018	0.064909	0.701155	0.205918
0.018748	0.005781	0.952171	0.023301
0.076649	0.007568	0.076046	0.839738
0.096752	0.712521	0.016359	0.174368
0.029539	0.934856	0.0	0.035604

MOTIF	Liver_E11.5_H3K4me2_83_86_0.508_1.013387e-55
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.039957	0.867148	0.033789	0.059107
0.004273	0.951073	0.02993	0.014724
0.267141	0.602232	0.013341	0.117286
0.212908	0.013036	0.769653	0.004404
0.075185	0.082111	0.797023	0.04568
0.029353	0.044973	0.742339	0.183335
0.076083	0.071315	0.0	0.852603
0.007214	0.785963	0.0	0.206824
0.009095	0.990905	0.0	0.0

MOTIF	Intestine_P0_H3K4me2_77_66_0.524_3.495734e-102
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.077244	0.605832	0.03572	0.281204
0.038868	0.907577	0.033207	0.020348
0.124152	0.650475	0.021844	0.203529
0.035831	0.020736	0.927597	0.015837
0.048037	0.074016	0.835845	0.042103
0.016537	0.047592	0.754258	0.181613
0.08697	0.019624	0.028675	0.864731
0.01403	0.730694	0.041192	0.214084
0.024701	0.932883	0.0	0.042415

MOTIF	Lung_E15.5_H3K4me2_86_54_0.524_6.361319e-133
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.073176	0.670328	0.062142	0.194354
0.023575	0.907351	0.029226	0.039848
0.160649	0.762404	0.025663	0.051283
0.142036	0.06362	0.735953	0.05839
0.056479	0.056167	0.834761	0.052593
0.033345	0.04102	0.816711	0.108924
0.115918	0.037844	0.006022	0.840216
0.054356	0.727141	0.11079	0.107712
0.065086	0.881929	0.013563	0.039422

MOTIF	Stomach_E14.5_H3K4me2_86_61_0.527_3.026081e-124
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.061198	0.75123	0.049137	0.138436
0.009961	0.923403	0.05174	0.014896
0.134549	0.6974	0.041199	0.126852
0.062449	0.054102	0.86873	0.014719
0.13093	0.038247	0.711717	0.119106
0.026876	0.030789	0.882256	0.06008
0.108365	0.0	0.0	0.891635
0.006479	0.830663	0.047082	0.115776
0.167202	0.722358	0.027234	0.083206

MOTIF	Heart_E11.5_H3K4me2_99_88_0.514_5.191866e-187
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.0	0.0	1.0	0.0
1.0	0.0	0.0	0.0
0.093919	0.80733	0.043855	0.054896
0.0	0.946789	0.027759	0.025453
0.0	0.954324	0.045676	0.0
0.057602	0.019291	0.798281	0.124825
0.0	0.0	1.0	0.0
0.075934	0.0	0.468524	0.455542

MOTIF	Stomach_E16.5_H3K4me2_41_89_0.591_0
letter-probability matrix: alength= 4 w= 7 nsites= 100 E= 1.0e-1
0.0	0.794757	0.0	0.205243
0.077047	0.873648	0.049305	0.0
0.020974	0.0	0.939375	0.039652
0.164715	0.050486	0.743333	0.041465
0.002069	0.368908	0.616962	0.012061
0.106338	0.0	0.02224	0.871421
0.005116	0.95899	0.035894	0.0

MOTIF	Hindbrain_E12.5_H3K4me3_75_98_0.552_2.524781e-91
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.938903	0.0	0.0	0.061097
0.03302	0.020559	0.946421	0.0
0.938007	0.0	0.0	0.061993
0.182086	0.811531	0.0	0.006383
0.070481	0.709586	0.164514	0.055419
0.014296	0.71881	0.132393	0.134501
0.03734	0.140026	0.777745	0.044889
0.048144	0.040848	0.901299	0.009709
0.315797	0.0	0.521259	0.162943

MOTIF	Kidney_E14.5_H3K4me3_66_72_0.590_4.701395e-259
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.020453	0.0	0.979547	0.0
0.770092	0.077072	0.073334	0.079501
0.094654	0.84718	0.037212	0.020954
0.135965	0.72987	0.073234	0.060931
0.088837	0.767559	0.031374	0.11223
0.034323	0.019952	0.926779	0.018946
0.16151	0.046357	0.771635	0.020498
0.309218	0.010027	0.670766	0.009989
0.052447	0.903071	0.0	0.044483

MOTIF	Liver_E16.5_H3K9me3_28_167_0.541_5.488669e-14
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.997	0.001	0.001	0.001
0.829	0.122	0.025	0.024
0.092	0.71	0.083	0.115
0.07	0.581	0.107	0.242
0.001	0.577	0.254	0.168
0.207	0.124	0.523	0.146
0.195	0.026	0.736	0.043
0.165	0.029	0.743	0.063
0.005	0.007	0.001	0.987
0.053	0.877	0.001	0.069