MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Forebrain_E14.5_H3K4me1_88_118_0.504_2.140219e-20
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.028014	0.927963	0.044023	0.0
0.789764	0.069053	0.12992	0.011262
0.009424	0.093132	0.897444	0.0
0.092335	0.047172	0.014579	0.845914
0.0	0.0	1.0	0.0
0.175713	0.020303	0.0	0.803985
0.03176	0.042889	0.896064	0.029287
0.268973	0.136556	0.594471	0.0
0.228124	0.589259	0.0	0.182617

MOTIF	Limb_E12.5_H3K4me1_107_139_0.500_3.736392e-17
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.988747	0.011253	0.0
0.919287	0.029594	0.031546	0.019574
0.006545	0.068829	0.924626	0.0
0.131098	0.038285	0.005102	0.825515
0.0	0.0	1.0	0.0
0.094994	0.053396	0.066446	0.785164
0.224904	0.009892	0.752323	0.012881
0.189696	0.042777	0.7123	0.055227
0.175107	0.664231	0.0	0.160661
0.174731	0.462306	0.262847	0.100116

MOTIF	Intestine_P0_H3K4me1_56_110_0.510_7.352943e-10
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.976437	0.0	0.023563
0.704072	0.09557	0.189215	0.011143
0.048325	0.042755	0.90892	0.0
0.054152	0.016456	0.015384	0.914007
0.010071	0.0	0.989929	0.0
0.015393	0.144908	0.082729	0.756969
0.197885	0.007049	0.733552	0.061514
0.353804	0.011064	0.626528	0.008604
0.028132	0.957015	0.0	0.014852

MOTIF	Limb_E14.5_H3K4me1_133_109_0.502_3.898398e-22
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.063948	0.926414	0.0	0.009638
0.707675	0.203778	0.02133	0.067218
0.067289	0.072993	0.859718	0.0
0.01431	0.026363	0.042249	0.917078
0.004187	0.0	0.995813	0.0
0.02387	0.004878	0.034445	0.936806
0.107465	0.071727	0.803759	0.017049
0.389293	0.074677	0.447958	0.088072
0.048198	0.92127	0.015966	0.014567

MOTIF	Heart_E16.5_H3K4me1_59_96_0.511_1.678284e-35
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.064772	0.919804	0.00612	0.009304
0.932828	0.023287	0.013221	0.030664
0.002334	0.996192	0.0	0.001474
0.906206	0.064705	0.012856	0.016233
0.016856	0.932212	0.050932	0.0
0.0	0.030537	0.06335	0.906113
0.066757	0.012533	0.915148	0.005562
0.15585	0.43918	0.095444	0.309526
0.080521	0.552629	0.29249	0.074359

MOTIF	Kidney_E14.5_H3K4me1_82_115_0.508_2.484614e-19
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.311469	0.443094	0.227154	0.018283
0.047043	0.910116	0.028186	0.014655
0.896815	0.040575	0.014261	0.048349
0.0	0.988551	0.01058	0.000869
0.836803	0.07259	0.034031	0.056576
0.0	0.901531	0.09031	0.008159
0.0	0.009335	0.0366	0.954065
0.012122	0.047307	0.830587	0.109984
0.094488	0.523107	0.078242	0.304162

MOTIF	Kidney_E15.5_H3K4me1_90_137_0.506_2.663576e-39
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.395664	0.322194	0.258275	0.023867
0.025839	0.923519	0.030404	0.020238
0.85937	0.092983	0.016999	0.030648
0.010005	0.989995	0.0	0.0
0.846007	0.040438	0.019985	0.09357
0.0	0.947467	0.052533	0.0
0.0	0.016647	0.033402	0.949952
0.010752	0.06287	0.903593	0.022785
0.167633	0.538381	0.067048	0.226938

MOTIF	Limb_E15.5_H3K4me1_95_127_0.501_9.837744e-18
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.481836	0.460126	0.040787	0.017251
0.02354	0.933627	0.032848	0.009985
0.955953	0.026805	0.017242	0.0
0.0	0.997709	0.0	0.002291
0.881392	0.06456	0.032653	0.021395
0.0	0.927754	0.072246	0.0
0.0	0.045759	0.022823	0.931418
0.059845	0.114029	0.806414	0.019712
0.206094	0.376654	0.098447	0.318805

MOTIF	Intestine_E14.5_H3K4me1_87_119_0.507_1.355448e-18
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.017552	0.93558	0.0	0.046868
0.715345	0.249832	0.013942	0.020882
0.03182	0.002468	0.965712	0.0
0.050682	0.069808	0.013085	0.866424
0.000551	0.027597	0.965615	0.006236
0.030502	0.018296	0.101532	0.849671
0.02254	0.176468	0.778298	0.022693
0.240155	0.103299	0.656547	0.0
0.33488	0.078024	0.578897	0.008199

MOTIF	Heart_P0_H3K4me1_62_105_0.505_1.44929e-20
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.056664	0.613241	0.246504	0.083591
0.053345	0.884107	0.035931	0.026617
0.859906	0.04019	0.028094	0.07181
0.0	0.995279	0.0	0.004721
0.961993	0.0	0.026905	0.011102
0.0	0.914049	0.047435	0.038516
0.0	0.03332	0.244385	0.722295
0.0	0.018617	0.978012	0.003371
0.128628	0.367111	0.0	0.504261

MOTIF	Limb_E14.5_H3K4me1_139_131_0.502_5.494966e-18
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.019717	0.821637	0.050411	0.108234
0.0	0.971321	0.009581	0.019098
0.859739	0.039694	0.064717	0.035849
0.0	0.996285	0.0	0.003715
0.915177	0.019422	0.034353	0.031048
0.0	0.861177	0.138823	0.0
0.0	0.01348	0.09238	0.894139
0.137277	0.025608	0.823356	0.013759
0.341658	0.33794	0.0	0.320401

MOTIF	Midbrain_P0_H3K4me1_71_75_0.514_7.857159e-21
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.045853	0.770037	0.0	0.18411
0.01757	0.847073	0.023957	0.1114
0.831938	0.105607	0.007879	0.054575
0.004151	0.974527	0.005465	0.015857
0.702407	0.089292	0.198727	0.009574
0.006141	0.895975	0.069641	0.028243
0.024435	0.020186	0.176393	0.778986
0.004021	0.0	0.984611	0.011368
0.051745	0.550126	0.059481	0.338648

MOTIF	Hindbrain_E11.5_H3K9me3_43_64_0.521_0.001393686
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.015323	0.94208	0.042597	0.0
0.0	0.585572	0.172929	0.241498
0.773228	0.064053	0.147612	0.015107
0.0	0.953932	0.03716	0.008908
0.975952	0.0	0.024048	0.0
0.047662	0.868735	0.042917	0.040686
0.0	0.240551	0.015772	0.743677
0.0	0.031937	0.930367	0.037696
0.760916	0.023613	0.106288	0.109183