MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Liver_E13.5_H3K4me2_45_42_0.555_3.108147e-318
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.136575	0.706945	0.074855	0.081625
0.0	0.966751	0.033249	0.0
0.089146	0.050935	0.042029	0.817891
0.004395	0.031445	0.96416	0.0
0.173152	0.540794	0.041718	0.244336
0.0	0.04361	0.930977	0.025413
0.0	0.0	1.0	0.0
0.228028	0.669512	0.100108	0.002353
0.0	0.031571	0.84894	0.119489

MOTIF	Cranio-Facial_E12.5_H3K4me3_38_29_0.669_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.950163	0.049837	0.0
0.066427	0.062933	0.039606	0.831034
0.008751	0.071672	0.905291	0.014285
0.009304	0.872105	0.026498	0.092093
0.085475	0.013903	0.876359	0.024262
0.04847	0.039082	0.800844	0.111604
0.405047	0.398397	0.041568	0.154988
0.020361	0.070979	0.873336	0.035324
0.058701	0.811242	0.0528	0.077257
0.435214	0.150701	0.222889	0.191196

MOTIF	Cranio-Facial_E14.5_H3K4me3_41_32_0.649_7.040435e-321
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.943133	0.056867	0.0
0.121839	0.010069	0.06542	0.802672
0.014956	0.034012	0.944019	0.007013
0.195299	0.738983	0.029645	0.036073
0.203577	0.121692	0.667161	0.00757
0.068687	0.029893	0.811636	0.089785
0.261405	0.659667	0.062396	0.016531
0.012471	0.033126	0.90968	0.044722
0.0835	0.871697	0.024833	0.019971

MOTIF	Midbrain_E11.5_H3K4me3_56_39_0.592_5.608107e-140
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.036788	0.901442	0.06177	0.0
0.043392	0.043957	0.02245	0.890201
0.014317	0.02323	0.962453	0.0
0.085608	0.872802	0.025217	0.016373
0.374467	0.02602	0.579766	0.019747
0.041996	0.030238	0.923533	0.004234
0.348069	0.508522	0.027273	0.116135
0.027095	0.089113	0.883792	0.0
0.023674	0.872383	0.015956	0.087988
0.18769	0.0	0.12786	0.68445

MOTIF	Midbrain_E14.5_H3K4me3_51_34_0.628_6.721374e-309
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.042694	0.467811	0.030916	0.458579
0.0	0.945651	0.054349	0.0
0.039654	0.085645	0.018611	0.85609
0.004568	0.039204	0.956228	0.0
0.10109	0.831947	0.05971	0.007252
0.393042	0.050318	0.528273	0.028367
0.030567	0.039493	0.870841	0.059098
0.072336	0.668081	0.033169	0.226413
0.021096	0.065887	0.899871	0.013147
0.145566	0.672896	0.033977	0.14756

MOTIF	Forebrain_E14.5_H3K4me3_36_40_0.676_2.928984e-316
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.279995	0.443263	0.0	0.276742
0.0	0.899924	0.100076	0.0
0.123062	0.0	0.079492	0.797447
0.0	0.090249	0.909751	0.0
0.006342	0.965032	0.00731	0.021315
0.066544	0.020818	0.898848	0.01379
0.005936	0.054026	0.940038	0.0
0.025717	0.462215	0.098401	0.413666
0.0	0.0	1.0	0.0

MOTIF	Limb_E15.5_H3K4me3_46_24_0.623_7.671257e-313
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.362822	0.400071	0.0	0.237107
0.018925	0.916335	0.06474	0.0
0.084224	0.005048	0.057982	0.852746
0.004284	0.055835	0.939881	0.0
0.003113	0.765767	0.038725	0.192395
0.073214	0.034232	0.867076	0.025477
0.0	0.025558	0.964479	0.009962
0.031759	0.684739	0.035523	0.247979
0.007464	0.017877	0.941597	0.033062
0.143747	0.573947	0.016788	0.265518

MOTIF	Neural-Tube_E12.5_H3K4me3_48_62_0.605_3.193119e-284
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.048796	0.781574	0.0	0.169631
0.004317	0.969543	0.02614	0.0
0.219527	0.0	0.054869	0.725604
0.006032	0.065293	0.928675	0.0
0.001277	0.817197	0.020533	0.160993
0.094817	0.012598	0.852054	0.04053
0.012482	0.066405	0.907963	0.01315
0.287778	0.41735	0.002573	0.292299
0.004391	0.047263	0.898691	0.049656

MOTIF	Midbrain_E15.5_H3K9ac_29_24_0.622_9.984936e-313
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.004829	0.835816	0.159354	0.0
0.087452	0.014366	0.020467	0.877715
0.004084	0.042171	0.953744	0.0
0.022334	0.766796	0.071861	0.139009
0.196817	0.016725	0.746606	0.039852
0.100724	0.01015	0.858959	0.030167
0.214805	0.599541	0.056579	0.129075
0.009772	0.044126	0.90539	0.040712
0.067723	0.86155	0.040688	0.030039
0.185537	0.25625	0.326413	0.2318

MOTIF	Limb_E13.5_H3K9ac_60_66_0.547_2.112665e-127
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.135895	0.68278	0.04814	0.133185
0.0	1.0	0.0	0.0
0.067878	0.047091	0.037085	0.847946
0.0	0.0	0.979516	0.020484
0.147891	0.439319	0.088215	0.324576
0.0	0.045632	0.902738	0.05163
0.011734	0.032691	0.941342	0.014233
0.257512	0.632183	0.071765	0.038541
0.013585	0.043466	0.877531	0.065418

MOTIF	Midbrain_P0_H3K9ac_59_39_0.558_1.071054e-83
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.073811	0.782109	0.025068	0.119012
0.0	0.959556	0.040444	0.0
0.205981	0.047953	0.0	0.746066
0.0	0.0	0.987554	0.012446
0.030047	0.777247	0.031191	0.161515
0.012783	0.032696	0.865342	0.089179
0.005396	0.026933	0.946513	0.021158
0.002233	0.442143	0.417995	0.137629
0.04253	0.016125	0.861944	0.0794

MOTIF	Forebrain_E16.5_H3K9ac_25_19_0.606_2.667954e-321
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.116207	0.026529	0.676204	0.18106
0.01655	0.698634	0.215833	0.068983
0.05559	0.862447	0.043651	0.038312
0.108693	0.046282	0.553674	0.291351
0.048405	0.691321	0.253597	0.006677
0.019199	0.868731	0.03137	0.0807
0.113998	0.022735	0.835046	0.028221
0.017862	0.883929	0.04744	0.050769
0.849812	0.036022	0.027504	0.086662
0.0	0.028319	0.971681	0.0

MOTIF	Stomach_E15.5_H3K9ac_28_18_0.642_5.177641e-206
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.059625	0.825683	0.101342	0.01335
0.163973	0.676186	0.113083	0.046758
0.070594	0.042815	0.771252	0.115339
0.015002	0.845414	0.12992	0.009664
0.107902	0.662176	0.065596	0.164326
0.029625	0.058236	0.849391	0.062748
0.016841	0.865685	0.08355	0.033924
0.813307	0.008863	0.070859	0.106971
0.0	0.051482	0.94515	0.003367