MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Cranio-Facial_E12.5_H3K4me3_71_68_0.582_1.597475e-163
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.890685	0.083051	0.0	0.026265
0.015633	0.0	0.984367	0.0
0.235179	0.0	0.764821	0.0
0.163891	0.736307	0.0	0.099802
0.033904	0.043442	0.902885	0.019768
0.402335	0.561228	0.0	0.036437
0.0	0.019461	0.980539	0.0
0.0	0.058849	0.941151	0.0
0.977053	0.0	0.0	0.022947

MOTIF	Forebrain_E13.5_H3K4me3_51_52_0.639_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.903393	0.0	0.0	0.096607
0.0	0.068844	0.931156	0.0
0.227944	0.059329	0.677068	0.035659
0.080389	0.865671	0.015111	0.03883
0.105719	0.014123	0.852937	0.027221
0.140608	0.818846	0.018222	0.022323
0.032718	0.029547	0.810085	0.12765
0.008953	0.025093	0.965954	0.0
0.646042	0.0	0.0	0.353958

MOTIF	Intestine_E16.5_H3K4me3_40_53_0.623_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.794831	0.062658	0.036451	0.10606
0.0	0.060686	0.939314	0.0
0.268017	0.0	0.709107	0.022876
0.086281	0.742966	0.0	0.170753
0.030966	0.0	0.941282	0.027752
0.087472	0.797115	0.053453	0.061959
0.02498	0.045875	0.752426	0.176719
0.008707	0.0	0.983617	0.007677
0.809921	0.030944	0.043535	0.1156

MOTIF	Kidney_P0_H3K4me3_44_49_0.644_3.722886e-309
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.035315	0.0	0.957527	0.007159
0.175009	0.038778	0.767435	0.018778
0.131435	0.717556	0.013557	0.137452
0.122089	0.046078	0.803268	0.028565
0.083055	0.827187	0.032098	0.057661
0.043606	0.177046	0.613851	0.165497
0.004269	0.062601	0.930195	0.002934
0.90037	0.0	0.014808	0.084823
0.048477	0.943387	0.0	0.008136

MOTIF	Hindbrain_E11.5_H3K4me3_34_28_0.680_2.39379e-313
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.017809	0.057183	0.918864	0.006143
0.147622	0.011474	0.764849	0.076056
0.043437	0.798072	0.028894	0.129598
0.08599	0.017263	0.85529	0.041457
0.209184	0.561966	0.066102	0.162748
0.023664	0.007139	0.878399	0.090798
0.001855	0.035809	0.946357	0.015979
0.79123	0.08119	0.019093	0.108487
0.128521	0.817267	0.040738	0.013474
0.362409	0.023131	0.350626	0.263834

MOTIF	Midbrain_E15.5_H3K4me3_16_37_0.695_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.016874	0.015101	0.968025	0.0
0.254823	0.007625	0.563414	0.174138
0.034939	0.931367	0.015459	0.018235
0.026077	0.020279	0.92877	0.024874
0.052753	0.648147	0.029471	0.26963
0.005679	0.038151	0.904581	0.051588
0.005696	0.062697	0.928451	0.003156
0.805371	0.023763	0.063031	0.107835
0.109049	0.830873	0.057003	0.003075

MOTIF	Midbrain_E15.5_H3K4me3_33_65_0.659_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.618262	0.116475	0.074568	0.190695
0.0	0.047254	0.946647	0.006099
0.04263	0.061607	0.857002	0.038761
0.037773	0.838108	0.0	0.124119
0.0	0.059828	0.803094	0.137078
0.058526	0.781719	0.0	0.159755
0.0	0.213671	0.692613	0.093716
0.0	0.029318	0.970682	0.0
0.955235	0.044765	0.0	0.0

MOTIF	Hindbrain_E14.5_H3K4me3_62_40_0.601_3.260235e-189
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.390248	0.458712	0.0	0.15104
0.867107	0.031089	0.0	0.101804
0.0	0.052464	0.943239	0.004298
0.26013	0.047655	0.687306	0.004909
0.099763	0.86086	0.027818	0.011559
0.02692	0.011499	0.922678	0.038903
0.057153	0.740446	0.0	0.202401
0.093636	0.020987	0.850606	0.03477
0.0	0.189024	0.805708	0.005268
0.85581	0.080669	0.0	0.063521
0.282182	0.0	0.0	0.717818

MOTIF	Stomach_P0_H3K4me3_73_94_0.592_8.318491e-288
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.898905	0.042664	0.044281	0.014151
0.0	0.0	0.982982	0.017018
0.060125	0.0	0.931549	0.008326
0.05322	0.835943	0.073086	0.037751
0.187536	0.03786	0.744171	0.030434
0.124262	0.58399	0.0721	0.219648
0.180111	0.016311	0.588249	0.215329
0.0	0.03926	0.949179	0.011561
0.867298	0.132702	0.0	0.0

MOTIF	Liver_E14.5_H3K27me3_16_41_0.600_2.595573e-150
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.04569	0.017861	0.672879	0.26357
0.050233	0.066703	0.679162	0.203902
0.004339	0.979544	0.0	0.016117
0.158794	0.019737	0.789606	0.031862
0.004904	0.924273	0.054809	0.016015
0.03573	0.049897	0.724268	0.190105
0.0	0.038231	0.849547	0.112222
0.810862	0.011163	0.038225	0.13975
0.01359	0.885473	0.088515	0.012423

MOTIF	Midbrain_E11.5_H3K9ac_31_43_0.602_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.059946	0.071254	0.800181	0.068618
0.316315	0.036701	0.465899	0.181086
0.015853	0.910393	0.0	0.073754
0.008865	0.050655	0.911329	0.029151
0.020054	0.893309	0.036725	0.049912
0.018095	0.023069	0.776523	0.182313
0.0	0.025537	0.951546	0.022917
0.845598	0.0	0.0	0.154402
0.0	0.99068	0.0	0.00932

MOTIF	Forebrain_E14.5_H3K9ac_7_25_0.644_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.042798	0.919851	0.037352	0.0
0.063019	0.007513	0.890909	0.038559
0.040493	0.020634	0.824322	0.11455
0.031609	0.80982	0.011326	0.147246
0.019256	0.0	0.828375	0.152369
0.232131	0.683524	0.069763	0.014582
0.292837	0.039506	0.625948	0.041709
0.037953	0.032554	0.881724	0.047769
0.836898	0.094659	0.0	0.068443

MOTIF	Midbrain_E13.5_H3K9ac_2_161_0.640_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.1	0.1	0.1	0.7
0.1	0.7	0.1	0.1
0.1	0.7	0.1	0.1
0.1	0.1	0.7	0.1
0.1	0.7	0.1	0.1
0.1	0.1	0.7	0.1
0.1	0.7	0.1	0.1
0.1	0.7	0.1	0.1
0.1	0.1	0.7	0.1
0.1	0.7	0.1	0.1