MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Hindbrain_E12.5_H3K4me2_49_71_0.576_8.455658e-249
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.020328	0.0	0.906526	0.073146
0.0	0.965917	0.025107	0.008976
0.010792	0.0	0.684427	0.304782
0.0	0.909138	0.039569	0.051292
0.063824	0.036289	0.032636	0.86725
0.003777	0.588577	0.067372	0.340274
0.032197	0.747339	0.027616	0.192849
0.011071	0.911088	0.027983	0.049858
0.013087	0.886039	0.061151	0.039724

MOTIF	Cranio-Facial_E15.5_H3K4me2_79_82_0.550_1.498178e-114
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.31987	0.0	0.68013	0.0
0.031854	0.0	0.899532	0.068614
0.0	1.0	0.0	0.0
0.032141	0.0	0.723099	0.24476
0.0	0.643949	0.29508	0.060972
0.151697	0.0	0.0	0.848303
0.010781	0.650418	0.046409	0.292392
0.041455	0.852469	0.055029	0.051046
0.016317	0.924886	0.012807	0.045989

MOTIF	Limb_E12.5_H3K4me2_42_61_0.588_0
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.019747	0.0	0.913446	0.066807
0.0	0.972938	0.0	0.027062
0.018134	0.043757	0.879857	0.058253
0.0	0.892275	0.084011	0.023714
0.015838	0.0	0.0	0.984162
0.009497	0.718005	0.0	0.272498
0.057853	0.865308	0.021524	0.055316
0.0	0.886286	0.057691	0.056023

MOTIF	Stomach_E14.5_H3K4me2_14_60_0.660_0
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.0	0.095341	0.904659	0.0
0.0	0.0	1.0	0.0
0.919175	0.0	0.065441	0.015385
0.214974	0.033723	0.751303	0.0
0.043195	0.956805	0.0	0.0
0.0	0.0	1.0	0.0
0.041853	0.894452	0.028767	0.034928
0.0	0.553872	0.446128	0.0

MOTIF	Forebrain_P0_H3K4me2_61_57_0.569_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.092808	0.810339	0.0	0.096853
0.039906	0.863278	0.039216	0.0576
0.163389	0.0	0.791152	0.045459
0.085018	0.041053	0.847031	0.026898
0.032822	0.567856	0.355183	0.044139
0.034227	0.011043	0.8696	0.08513
0.00365	0.847137	0.016344	0.132869
0.118032	0.039613	0.017876	0.824479
0.050562	0.879253	0.019571	0.050614

MOTIF	Intestine_P0_H3K4me2_25_41_0.595_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.020467	0.900046	0.060125	0.019362
0.069311	0.050812	0.794904	0.084973
0.15465	0.033711	0.769409	0.04223
0.049562	0.840496	0.099044	0.010898
0.0	0.0	0.972207	0.027793
0.110661	0.673256	0.0	0.216082
0.060746	0.069256	0.0	0.869998
0.0	0.977199	0.014273	0.008529
0.0	1.0	0.0	0.0

MOTIF	Liver_E14.5_H3K4me2_15_27_0.618_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	1.0	0.0	0.0
0.083383	0.069641	0.790262	0.056713
0.010313	0.0	0.96452	0.025168
0.0	0.94912	0.0	0.05088
0.0	0.029575	0.917357	0.053067
0.110382	0.693212	0.018498	0.177908
0.011507	0.034694	0.068989	0.88481
0.089299	0.481955	0.123321	0.305425
0.0	0.796378	0.041617	0.162005

MOTIF	Neural-Tube_E11.5_H3K4me2_33_31_0.616_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.958933	0.041067	0.0
0.093057	0.013916	0.768163	0.124864
0.002992	0.023287	0.800088	0.173633
0.03677	0.843433	0.0539	0.065898
0.005463	0.030533	0.661804	0.3022
0.070855	0.709425	0.110466	0.109254
0.024424	0.042879	0.099803	0.832893
0.04959	0.844538	0.02908	0.076793
0.013107	0.862903	0.032758	0.091232

MOTIF	Heart_P0_H3K4me3_51_62_0.605_1.793723e-311
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.159368	0.0	0.525775	0.314858
0.864903	0.030277	0.0	0.10482
0.017296	0.142914	0.83979	0.0
0.235481	0.729464	0.021382	0.013673
0.189253	0.056538	0.669699	0.08451
0.027398	0.958119	0.0	0.014483
0.04995	0.913265	0.0	0.036785
0.182239	0.061884	0.722133	0.033744
0.203372	0.0	0.778727	0.017901

MOTIF	Kidney_E16.5_H3K4me3_24_32_0.665_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	1.0	0.0	0.0
0.103232	0.03722	0.743449	0.116099
0.031089	0.0	0.850056	0.118854
0.019711	0.865595	0.081996	0.032697
0.005633	0.0182	0.911444	0.064724
0.065795	0.658944	0.071333	0.203928
0.046924	0.04535	0.010038	0.897689
0.046388	0.810449	0.045705	0.097457
0.115176	0.754891	0.0	0.129933
0.0	0.498284	0.42661	0.075106

MOTIF	Hindbrain_E12.5_H3K4me3_14_29_0.693_3.939605e-314
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.584027	0.0	0.415973
0.129531	0.846004	0.024464	0.0
0.046246	0.049048	0.838934	0.065771
0.107702	0.066778	0.784387	0.041133
0.0	0.842203	0.126236	0.031561
0.0	0.016843	0.968327	0.01483
0.186306	0.66966	0.009956	0.134078
0.023306	0.118343	0.0	0.858351
0.0	0.712507	0.058364	0.229129

MOTIF	Liver_E16.5_H3K4me3_12_38_0.667_0
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.027553	0.960438	0.0	0.012009
0.017252	0.0	0.968517	0.014231
0.204407	0.042186	0.713285	0.040122
0.0	0.935255	0.019912	0.044832
0.0	0.06838	0.908187	0.023433
0.052627	0.743069	0.0	0.204304
0.0	0.0	0.070005	0.929995
0.108148	0.842277	0.034468	0.015106

MOTIF	Neural-Tube_E15.5_H3K4me3_40_88_0.642_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.246235	0.753765	0.0	0.0
0.12262	0.0	0.87738	0.0
0.176929	0.0	0.797477	0.025594
0.0	0.915851	0.065034	0.019115
0.011488	0.047453	0.916734	0.024325
0.014495	0.929558	0.0253	0.030647
0.0	0.038426	0.0	0.961574
0.0	0.87129	0.0	0.12871
0.315842	0.391128	0.022263	0.270768