MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Kidney_P0_H3K4me2_105_104_0.519_7.610107e-36
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.429395	0.0	0.547777	0.022828
0.918374	0.058565	0.0	0.023061
0.012139	0.025955	0.948698	0.013208
0.008313	0.917756	0.018334	0.055597
0.079352	0.840269	0.080379	0.0
0.086796	0.153901	0.022304	0.736998
0.0	0.075317	0.924683	0.0
0.171657	0.435386	0.01431	0.378647
0.327441	0.0	0.672559	0.0

MOTIF	Liver_E12.5_H3K4me3_83_80_0.528_6.264585e-85
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.037597	0.896493	0.036119	0.02979
0.233367	0.088322	0.612025	0.066286
0.0	0.628977	0.371023	0.0
0.917401	0.056752	0.016006	0.00984
0.0	0.006476	0.993524	0.0
0.272036	0.121026	0.591413	0.015525
0.018881	0.938814	0.011115	0.03119
0.17506	0.030725	0.094752	0.699463
0.002338	0.973385	0.015171	0.009105

MOTIF	Limb_E12.5_H3K27ac_54_90_0.521_4.485029e-32
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.882381	0.010214	0.085409	0.021996
0.00312	0.065138	0.927086	0.004656
0.868177	0.043206	0.034845	0.053772
0.007832	0.279223	0.709534	0.00341
0.023789	0.774711	0.048823	0.152677
0.003895	0.835895	0.140916	0.019294
0.046156	0.054426	0.120477	0.77894
0.0	0.199642	0.64218	0.158179
0.031402	0.900681	0.016623	0.051294
0.239577	0.161373	0.355254	0.243797

MOTIF	Limb_E15.5_H3K27ac_51_82_0.525_2.166412e-42
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.813251	0.093069	0.09368	0.0
0.081788	0.084383	0.83383	0.0
0.802485	0.0	0.027983	0.169532
0.019348	0.03009	0.9373	0.013262
0.02482	0.86713	0.030947	0.077104
0.037931	0.740737	0.202539	0.018792
0.07607	0.032713	0.174571	0.716645
0.0	0.251965	0.748035	0.0
0.0	0.985128	0.0	0.014872

MOTIF	Intestine_E16.5_H3K4me1_46_46_0.518_2.678906e-40
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.564261	0.046658	0.389082	0.0
0.036651	0.006406	0.748035	0.208909
0.0	1.0	0.0	0.0
0.652964	0.049962	0.27945	0.017624
0.0	0.476402	0.488163	0.035435
0.033351	0.030391	0.855716	0.080542
0.019103	0.951298	0.007316	0.022284
0.017867	0.042822	0.074408	0.864903
0.011346	0.911463	0.035863	0.041328

MOTIF	Limb_E13.5_H3K4me1_31_109_0.526_5.397107e-85
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.718495	0.16715	0.067022	0.047333
0.498761	0.105655	0.222925	0.172659
0.119092	0.044162	0.761076	0.07567
0.037327	0.769812	0.19286	0.0
0.844721	0.084827	0.009	0.061452
0.037857	0.293506	0.658424	0.010213
0.052892	0.044831	0.652063	0.250214
0.002627	0.838569	0.065318	0.093487
0.034629	0.078991	0.044074	0.842305
0.006584	0.768256	0.097821	0.127339

MOTIF	Forebrain_E16.5_H3K4me1_49_73_0.521_2.872091e-68
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.843335	0.031073	0.099847	0.025745
0.172243	0.024556	0.797666	0.005536
0.784683	0.0504	0.017651	0.147266
0.003108	0.226854	0.746348	0.02369
0.030588	0.936912	0.011255	0.021244
0.1868	0.750939	0.052417	0.009844
0.048632	0.02631	0.143358	0.781701
0.000764	0.045441	0.914895	0.038899
0.012561	0.782584	0.023412	0.181443
0.08568	0.309578	0.393941	0.210802

MOTIF	Limb_E12.5_H3K4me1_36_82_0.521_1.042658e-39
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
1.0	0.0	0.0	0.0
0.564307	0.034065	0.330973	0.070656
0.156148	0.0	0.843852	0.0
0.921777	0.042958	0.0	0.035265
0.021232	0.021153	0.94253	0.015084
0.160305	0.812709	0.026986	0.0
0.0	0.960516	0.039484	0.0
0.052778	0.0	0.299771	0.647451
0.0	0.074353	0.879052	0.046595
0.023464	0.942184	0.0	0.034352

MOTIF	Neural-Tube_E14.5_H3K4me1_34_59_0.524_8.337112e-33
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.807391	0.0	0.192609	0.0
0.877453	0.024147	0.062191	0.036209
0.131003	0.011757	0.854549	0.002691
0.834619	0.058891	0.01014	0.09635
0.01948	0.025283	0.932883	0.022354
0.040629	0.895025	0.064346	0.0
0.068468	0.750077	0.170498	0.010957
0.049748	0.039173	0.143542	0.767537
0.0	0.319648	0.515114	0.165238
0.016107	0.921323	0.01996	0.042611
0.071142	0.50746	0.023697	0.397701

MOTIF	Forebrain_E16.5_H3K9ac_51_74_0.562_2.852592e-80
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.103362	0.640265	0.059089	0.197284
0.086323	0.009104	0.886009	0.018564
0.0	1.0	0.0	0.0
0.784279	0.095276	0.0	0.120445
0.0	0.164149	0.835851	0.0
0.117646	0.06991	0.787546	0.024898
0.010721	0.939908	0.04238	0.00699
0.11568	0.038253	0.026621	0.819445
0.0	0.746523	0.081578	0.171899

MOTIF	Heart_E13.5_H3K9ac_89_57_0.514_2.290419e-51
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.004129	0.919499	0.073524	0.002848
0.789259	0.048866	0.044075	0.117801
0.050267	0.074617	0.871677	0.003439
0.848886	0.041221	0.04834	0.061553
0.056595	0.153671	0.769612	0.020122
0.033605	0.767279	0.158592	0.040523
0.03285	0.838614	0.101538	0.026998
0.111832	0.058784	0.135688	0.693696
0.006885	0.229436	0.737524	0.026155
0.183768	0.562053	0.165655	0.088523
0.168173	0.120819	0.388745	0.322262

MOTIF	Limb_E13.5_H3K9ac_83_60_0.515_2.878394e-31
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.00848	0.947501	0.043288	0.000731
0.756396	0.128016	0.03495	0.080639
0.049487	0.10649	0.83893	0.005093
0.644365	0.136163	0.120946	0.098526
0.055903	0.15961	0.779313	0.005174
0.064336	0.666877	0.188972	0.079815
0.026595	0.797292	0.169681	0.006432
0.069994	0.105119	0.18815	0.636737
0.008214	0.15365	0.814927	0.02321
0.038826	0.376082	0.229737	0.355355

MOTIF	Neural-Tube_E13.5_H3K9ac_87_62_0.512_4.519121e-47
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.006766	0.886763	0.103658	0.002813
0.767493	0.097478	0.037913	0.097115
0.042792	0.086504	0.86665	0.004054
0.867021	0.030406	0.053902	0.04867
0.061127	0.10439	0.823161	0.011322
0.034829	0.724136	0.192182	0.048852
0.023339	0.87552	0.071957	0.029184
0.16045	0.198705	0.150664	0.490181
0.019734	0.086954	0.853916	0.039397
0.124743	0.433014	0.207335	0.234908