MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Limb_E12.5_H3K9me3_78_175_0.520_1.45148e-28
letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1
0.026	0.007	0.966	0.001
0.001	0.984	0.006	0.009
0.022	0.056	0.001	0.921
0.001	0.006	0.001	0.992
0.001	0.984	0.001	0.014
0.001	0.003	0.001	0.995
0.062	0.022	0.906	0.01
0.001	0.057	0.001	0.941
0.975	0.001	0.001	0.023
0.009	0.001	0.949	0.041
0.001	0.04	0.001	0.958
0.03	0.914	0.032	0.024

MOTIF	Liver_E12.5_H3K9me3_22_165_0.523_6.922605e-14
letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1
0.089	0.881	0.003	0.027
0.011	0.034	0.002	0.953
0.983	0.001	0.015	0.001
0.013	0.965	0.001	0.021
0.993	0.002	0.001	0.004
0.014	0.009	0.975	0.002
0.997	0.001	0.001	0.001
0.953	0.002	0.041	0.004
0.006	0.013	0.98	0.001
0.028	0.91	0.001	0.061
0.031	0.001	0.014	0.954
0.954	0.005	0.04	0.001

MOTIF	Liver_E13.5_H3K9me3_24_109_0.519_5.214564e-13
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.006426	0.908726	0.007093	0.077755
0.018108	0.501997	0.069779	0.410117
0.841071	0.011834	0.047975	0.09912
0.013637	0.965166	0.005923	0.015274
0.893098	0.03401	0.068434	0.004459
0.00922	0.114266	0.862563	0.013951
0.935307	0.02015	0.018376	0.026167
0.758506	0.122209	0.032738	0.086546
0.073415	0.005671	0.872957	0.047957

MOTIF	Hindbrain_E15.5_H3K9me3_36_99_0.528_2.699706e-10
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.00426	0.142013	0.853726	0.0
0.0	0.845968	0.080457	0.073575
0.0	0.113254	0.005128	0.881618
0.037008	0.000476	0.0	0.962516
0.220213	0.735522	0.019321	0.024944
0.020915	0.005823	0.0	0.973262
0.173527	0.006663	0.746436	0.073374
0.0	0.020413	0.0	0.979587
0.512681	0.017778	0.017625	0.451916

MOTIF	Forebrain_E14.5_H3K9me3_31_101_0.521_7.579298e-08
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.477244	0.309316	0.174442	0.038998
0.218571	0.132982	0.260995	0.387453
0.754663	0.066513	0.166362	0.012463
0.095221	0.860542	0.008702	0.035535
0.968893	0.003438	0.005682	0.021986
0.035041	0.027914	0.92171	0.015336
0.712363	0.055019	0.223361	0.009257
0.58308	0.003946	0.273562	0.139412
0.071579	0.0	0.903556	0.024865
0.029126	0.906755	0.037326	0.026792
0.063824	0.106257	0.002158	0.827761

MOTIF	Neural-Tube_E12.5_H3K9me3_36_120_0.528_1.871443e-19
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.085272	0.890454	0.024274
0.037855	0.879887	0.082259	0.0
0.0	0.09646	0.139468	0.764072
0.000935	0.05307	0.066474	0.879521
0.148306	0.706063	0.099899	0.045733
0.031222	0.048777	0.038412	0.881589
0.256438	0.022237	0.715603	0.005723
0.008891	0.06416	0.012205	0.914744
0.880119	0.049413	0.021989	0.04848

MOTIF	Heart_E13.5_H3K9me3_82_105_0.522_9.0747e-22
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.03518	0.219977	0.696791	0.048052
0.030287	0.939682	0.0	0.030031
0.142346	0.161111	0.003612	0.692932
0.028364	0.149084	0.018009	0.804544
0.026357	0.804391	0.068458	0.100795
0.062115	0.009235	0.009909	0.918741
0.056476	0.022055	0.88927	0.032199
0.020723	0.097033	0.037244	0.845
0.739374	0.051582	0.189885	0.019159

MOTIF	Cranio-Facial_E13.5_H3K9me3_34_114_0.526_1.02855e-16
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.032753	0.050602	0.916644	0.0
0.011439	0.950094	0.026791	0.011676
0.156795	0.094234	0.007714	0.741257
0.00852	0.239608	0.028058	0.723814
0.134004	0.676709	0.022874	0.166413
0.039103	0.004016	0.000274	0.956608
0.091353	0.009131	0.887947	0.011569
0.058568	0.042744	0.02552	0.873168
0.754542	0.072877	0.149631	0.022949

MOTIF	Forebrain_E12.5_H3K9me3_34_74_0.526_2.268401e-15
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.008963	0.017705	0.949929	0.023402
0.019021	0.967887	0.004818	0.008275
0.015406	0.078433	0.025326	0.880835
0.022734	0.190033	0.043675	0.743557
0.092149	0.701269	0.073807	0.132775
0.037026	0.022658	0.034224	0.906092
0.150487	0.027161	0.720573	0.101779
0.047005	0.051153	0.036861	0.864982
0.59283	0.105818	0.277558	0.023794

MOTIF	Forebrain_E13.5_H3K9me3_18_41_0.533_4.097175e-24
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.062103	0.028663	0.889402	0.019833
0.047106	0.833064	0.056453	0.063376
0.046625	0.197264	0.015001	0.741109
0.023227	0.22996	0.041547	0.705266
0.053106	0.891257	0.011279	0.044358
0.10197	0.017433	0.002407	0.87819
0.057334	0.014024	0.913266	0.015376
0.0423	0.101882	0.033068	0.822749
0.587037	0.06907	0.215876	0.128017

MOTIF	Midbrain_E13.5_H3K9me3_12_38_0.536_2.317213e-31
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.038426	0.077605	0.867699	0.01627
0.025415	0.933532	0.001337	0.039716
0.056253	0.054877	0.004598	0.884273
0.018578	0.214357	0.094954	0.672112
0.031969	0.869597	0.0313	0.067133
0.051894	0.034429	0.014736	0.898942
0.035871	0.074359	0.866922	0.022848
0.064604	0.122677	0.042142	0.770577
0.593596	0.098576	0.282062	0.025765
0.571415	0.01875	0.286918	0.122917

MOTIF	Cranio-Facial_E13.5_H3K9me3_15_118_0.532_5.292834e-23
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.689467	0.031169	0.257183	0.022182
0.038205	0.863101	0.015852	0.082842
0.945232	0.029899	0.003157	0.021712
0.165834	0.034781	0.77344	0.025945
0.878806	0.036358	0.025469	0.059368
0.753082	0.040525	0.095745	0.110648
0.048197	0.028241	0.8956	0.027961
0.000427	0.948657	0.024184	0.026733
0.324769	0.003731	0.004799	0.666702

MOTIF	Neural-Tube_E13.5_H3K9me3_43_86_0.527_5.644468e-21
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.806497	0.029772	0.092973	0.070758
0.126959	0.783853	0.035336	0.053852
0.952267	0.00396	0.002823	0.04095
0.093353	0.044386	0.826564	0.035696
0.893611	0.047025	0.031039	0.028324
0.710143	0.004992	0.190016	0.094849
0.097033	0.005804	0.842217	0.054946
0.0294	0.821875	0.092217	0.056507
0.212492	0.078399	0.001872	0.707237

MOTIF	Neural-Tube_E15.5_H3K9me3_39_52_0.526_1.266318e-10
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.008024	0.021668	0.924806	0.045502
0.08194	0.850296	0.036802	0.030962
0.072329	0.192338	0.048886	0.686448
0.04261	0.024525	0.061418	0.871447
0.057085	0.764189	0.021233	0.157492
0.020546	0.006401	0.01566	0.957393
0.049528	0.029891	0.866058	0.054523
0.003973	0.226467	0.008274	0.761285
0.721238	0.024514	0.061512	0.192736