MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Hindbrain_E12.5_H3K27me3_60_23_0.505_7.57539e-06
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.0	0.0	0.957325	0.042675
0.134332	0.537353	0.328315	0.0
0.233087	0.631833	0.062147	0.072932
0.071988	0.005249	0.069243	0.85352
0.003706	0.992417	0.0	0.003877
0.036422	0.936001	0.024558	0.00302
0.022842	0.908707	0.037966	0.030485
0.180474	0.010113	0.745027	0.064387
0.046309	0.85833	0.092031	0.003331
0.038985	0.033783	0.033808	0.893423
0.0	0.257686	0.742314	0.0

MOTIF	Kidney_E14.5_H3K4me3_53_92_0.610_8.511471e-225
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.902888	0.097112	0.0
0.830272	0.024607	0.038638	0.106484
0.004027	0.086954	0.904697	0.004323
0.005812	0.958232	0.023725	0.012231
0.0	0.0	0.984667	0.015333
0.097559	0.07745	0.392579	0.432412
0.0	0.0	0.974468	0.025532
0.83977	0.002832	0.049419	0.10798
0.122631	0.010801	0.790724	0.075844
0.30625	0.587899	0.082839	0.023012

MOTIF	Limb_E13.5_H3K4me3_80_72_0.577_1.692398e-145
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.01169	0.946283	0.042027	0.0
0.857628	0.059369	0.083003	0.0
0.0	0.062127	0.937873	0.0
0.175893	0.793209	0.019943	0.010955
0.003087	0.042262	0.947332	0.007318
0.350761	0.232376	0.396496	0.020367
0.023585	0.044242	0.932173	0.0
0.686144	0.060905	0.021879	0.231071
0.076229	0.008884	0.902578	0.012309

MOTIF	Midbrain_E16.5_H3K4me3_73_103_0.541_8.775117e-79
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.440596	0.559404	0.0
0.0165	0.967653	0.0	0.015847
0.808396	0.082666	0.0	0.108939
0.0	0.086232	0.913768	0.0
0.052884	0.624395	0.110134	0.212587
0.026723	0.01643	0.931427	0.025421
0.007775	0.057394	0.871173	0.063658
0.002939	0.010819	0.857776	0.128465
0.891632	0.015832	0.0	0.092537

MOTIF	Intestine_E15.5_H3K4me3_46_64_0.617_6.218732e-290
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.719206	0.023964	0.071751	0.185079
0.0	0.184204	0.802554	0.013242
0.015623	0.87778	0.011886	0.094711
0.037279	0.106911	0.82492	0.030889
0.119703	0.052012	0.781094	0.047191
0.013504	0.052117	0.93438	0.0
0.782965	0.034291	0.034134	0.148611
0.176495	0.108199	0.702112	0.013194
0.101712	0.059395	0.815741	0.023152

MOTIF	Kidney_P0_H3K4me3_72_71_0.571_2.588835e-152
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.849034	0.081029	0.0	0.069937
0.01179	0.049089	0.929307	0.009813
0.045419	0.790399	0.025087	0.139096
0.03494	0.056509	0.777514	0.131037
0.015247	0.206265	0.769911	0.008577
0.00941	0.036908	0.948639	0.005042
0.902365	0.037078	0.024714	0.035843
0.267936	0.045945	0.618194	0.067925
0.290856	0.0	0.699601	0.009543

MOTIF	Stomach_E14.5_H3K4me3_40_63_0.661_0
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.805133	0.0	0.0	0.194867
0.02232	0.050186	0.927495	0.0
0.059618	0.90326	0.01917	0.017952
0.057367	0.048714	0.880101	0.013819
0.0	0.518479	0.481521	0.0
0.0	0.048668	0.932682	0.01865
0.913719	0.0	0.060125	0.026156
0.350269	0.016898	0.594422	0.038411

MOTIF	Hindbrain_E16.5_H3K4me2_65_103_0.566_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.894622	0.038363	0.032128	0.034887
0.188347	0.097144	0.71451	0.0
0.024189	0.892913	0.043104	0.039793
0.012944	0.025645	0.907815	0.053596
0.311342	0.083798	0.578028	0.026832
0.14735	0.040233	0.812417	0.0
0.935982	0.016073	0.0	0.047945
0.044695	0.01182	0.929729	0.013756
0.323307	0.034198	0.642495	0.0

MOTIF	Lung_E16.5_H3K4me2_53_26_0.576_1.930144e-243
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.111702	0.33697	0.398796	0.152532
0.049648	0.816898	0.092782	0.040671
0.13761	0.632517	0.090433	0.13944
0.026888	0.7178	0.043579	0.211734
0.047998	0.017427	0.026593	0.907982
0.005198	0.888591	0.035598	0.070613
0.015221	0.955621	0.008929	0.020229
0.131279	0.630193	0.206898	0.03163
0.061263	0.023968	0.874714	0.040055
0.015711	0.808314	0.103605	0.07237
0.24224	0.0	0.255461	0.502299

MOTIF	Lung_E15.5_H3K4me2_37_24_0.593_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.10734	0.785771	0.090577	0.016311
0.123681	0.673638	0.070311	0.13237
0.016721	0.761431	0.045747	0.176101
0.090828	0.006122	0.053652	0.849397
0.00161	0.917451	0.033452	0.047487
0.018057	0.823016	0.050818	0.108109
0.055791	0.713816	0.197497	0.032897
0.041869	0.012019	0.8849	0.061212
0.013164	0.871839	0.084195	0.030802
0.154321	0.289434	0.183037	0.373208

MOTIF	Heart_E16.5_H3K4me2_47_29_0.564_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.022682	0.739626	0.079064	0.158627
0.026712	0.734953	0.04433	0.194004
0.043431	0.744125	0.019084	0.19336
0.086187	0.020924	0.04776	0.845129
0.003386	0.887943	0.043395	0.065276
0.00852	0.945828	0.035039	0.010613
0.055678	0.68927	0.169431	0.085621
0.04123	0.027052	0.907746	0.023972
0.093621	0.729654	0.111371	0.065354

MOTIF	Kidney_P0_H3K4me2_37_23_0.595_4.627637e-315
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.052509	0.647376	0.180138	0.119977
0.048278	0.75311	0.049327	0.149285
0.036915	0.805712	0.02489	0.132483
0.0742	0.008866	0.064241	0.852693
0.004427	0.892128	0.042215	0.061229
0.014276	0.875877	0.033538	0.076309
0.082367	0.767275	0.128558	0.0218
0.05329	0.033885	0.841525	0.0713
0.018921	0.792606	0.128579	0.059895

MOTIF	Midbrain_E13.5_H3K4me2_37_29_0.599_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.008967	0.638143	0.200633	0.152257
0.020003	0.769944	0.05298	0.157073
0.072984	0.777108	0.032333	0.117575
0.081445	0.03911	0.054318	0.825128
0.003896	0.905066	0.05019	0.040848
0.032993	0.887315	0.029459	0.050233
0.113233	0.711767	0.132114	0.042886
0.038159	0.020369	0.882232	0.05924
0.022804	0.83188	0.093714	0.051602

MOTIF	Neural-Tube_E15.5_H3K4me2_51_75_0.575_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.665221	0.296134	0.038645
0.0	0.399472	0.031313	0.569215
0.02413	0.0	0.033542	0.942328
0.0	0.909398	0.0	0.090602
0.009309	0.914967	0.063481	0.012244
0.036011	0.887713	0.063268	0.013009
0.061717	0.020748	0.88288	0.034655
0.018224	0.899716	0.053162	0.028898
0.08242	0.0	0.0	0.91758

MOTIF	Midbrain_E12.5_H3K9ac_45_59_0.576_8.250092e-216
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.743821	0.054412	0.075225	0.126542
0.005205	0.043412	0.947857	0.003526
0.063474	0.863657	0.039073	0.033796
0.026541	0.085583	0.870746	0.01713
0.105308	0.178595	0.53732	0.178777
0.033146	0.031186	0.935667	0.0
0.867151	0.028751	0.063541	0.040557
0.218417	0.013842	0.756486	0.011255
0.13848	0.02657	0.831211	0.003739