MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Limb_E11.5_H3K4me1_36_124_0.525_1.627509e-42
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.316366	0.654391	0.022605	0.006638
0.841297	0.030708	0.088437	0.039558
0.151782	0.233224	0.587765	0.02723
0.02986	0.0	0.958929	0.011211
0.039086	0.008548	0.946672	0.005693
0.804216	0.093721	0.056168	0.045895
0.949927	0.030542	0.0	0.019531
0.169908	0.024788	0.796546	0.008758
0.009284	0.967493	0.0	0.023223

MOTIF	Forebrain_P0_H3K4me1_56_80_0.516_1.018016e-15
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.039652	0.842046	0.091184	0.027117
0.028438	0.955385	0.008194	0.007984
0.63317	0.253376	0.046744	0.06671
0.031505	0.233786	0.707134	0.027576
0.031543	0.0	0.963823	0.004633
0.14774	0.0	0.845879	0.006382
0.937524	0.02285	0.022079	0.017547
0.927933	0.033059	0.0	0.039008
0.03489	0.181152	0.71269	0.071268
0.231632	0.379837	0.0	0.388531

MOTIF	Hindbrain_E13.5_H3K4me1_52_130_0.519_4.056354e-53
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.101642	0.836814	0.038718	0.022826
0.886592	0.048106	0.058216	0.007086
0.013234	0.166243	0.758263	0.062259
0.03765	0.032292	0.900636	0.029422
0.271345	0.0	0.721737	0.006918
0.978041	0.0	0.010206	0.011753
0.726532	0.026135	0.051417	0.195916
0.020358	0.209912	0.752791	0.016939
0.119857	0.790641	0.016242	0.07326

MOTIF	Hindbrain_E15.5_H3K4me1_48_73_0.524_1.414786e-55
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.108915	0.212165	0.483066	0.195854
0.136237	0.785596	0.034391	0.043776
0.021543	0.933264	0.008231	0.036962
0.746066	0.038309	0.142456	0.073169
0.013602	0.163089	0.798108	0.025201
0.169799	0.005068	0.818384	0.006748
0.276701	0.002641	0.711666	0.008992
0.864168	0.026551	0.093568	0.015714
0.869817	0.056826	0.052349	0.021008
0.118128	0.049152	0.763646	0.069074
0.156689	0.741679	0.0776	0.024033

MOTIF	Hindbrain_E13.5_H3K4me1_64_100_0.514_5.583282e-52
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.170713	0.628857	0.047201	0.153228
0.036406	0.914535	0.015694	0.033365
0.844869	0.03144	0.068642	0.055049
0.008076	0.11661	0.853636	0.021678
0.148854	0.00474	0.827391	0.019015
0.146424	0.013533	0.833149	0.006895
0.917502	0.021804	0.039498	0.021196
0.777444	0.115656	0.050493	0.056407
0.1514	0.117961	0.716503	0.014136

MOTIF	Midbrain_E12.5_H3K4me1_67_140_0.511_1.970373e-22
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.271424	0.57802	0.038145	0.112411
0.019807	0.960342	0.010155	0.009696
0.901064	0.04074	0.032795	0.0254
0.01367	0.096657	0.869599	0.020074
0.07261	0.014932	0.902521	0.009937
0.308476	0.003158	0.683232	0.005134
0.919498	0.051495	0.008388	0.02062
0.889868	0.07592	0.0	0.034212
0.261352	0.045541	0.5673	0.125807

MOTIF	Cranio-Facial_E11.5_H3K4me1_47_130_0.540_2.724808e-40
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.122223	0.177497	0.671334	0.028947
0.780192	0.099278	0.038536	0.081994
0.035957	0.11458	0.754645	0.094819
0.008031	0.099609	0.89236	0.0
0.219623	0.0	0.778204	0.002174
0.959436	0.022154	0.0	0.01841
0.927509	0.035582	0.0	0.036909
0.24653	0.041071	0.670156	0.042243
0.0	0.914226	0.018872	0.066902

MOTIF	Hindbrain_P0_H3K4me1_33_29_0.526_2.329205e-29
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.766833	0.03333	0.157845	0.041991
0.049723	0.083411	0.797529	0.069337
0.20241	0.056252	0.734291	0.007046
0.261355	0.0	0.724207	0.014438
0.911941	0.054349	0.030498	0.003212
0.81494	0.069441	0.021556	0.094063
0.10262	0.009451	0.872627	0.015302
0.030103	0.877116	0.077204	0.015577
0.105043	0.78615	0.021178	0.087629
0.0	0.101473	0.85535	0.043177

MOTIF	Limb_E11.5_H3K4me1_43_134_0.524_8.144417e-35
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.767171	0.014932	0.151066	0.066831
0.135393	0.023097	0.632653	0.208856
0.030874	0.005455	0.963671	0.0
0.100067	0.011331	0.868673	0.019929
0.843728	0.125667	0.030605	0.0
0.829099	0.150667	0.0	0.020234
0.293365	0.012397	0.6877	0.006538
0.059647	0.873861	0.03516	0.031332
0.045485	0.889948	0.039462	0.025105

MOTIF	Neural-Tube_E13.5_H3K4me1_41_68_0.523_4.517542e-59
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.714602	0.131655	0.153743	0.0
0.011058	0.293847	0.442579	0.252515
0.029534	0.01787	0.952596	0.0
0.066591	0.0	0.924939	0.00847
0.831199	0.089309	0.054781	0.024711
0.696925	0.269004	0.014504	0.019568
0.035584	0.00604	0.947682	0.010694
0.023062	0.905295	0.015583	0.05606
0.019288	0.919217	0.032151	0.029343

MOTIF	Hindbrain_E14.5_H3K4me2_85_66_0.518_1.268376e-16
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.0	1.0	0.0	0.0
0.345891	0.0	0.607885	0.046225
0.0	0.072252	0.878041	0.049707
0.008448	0.918004	0.01516	0.058389
0.018476	0.027464	0.028601	0.925459
0.0	0.242713	0.027554	0.729733
0.012077	0.900726	0.032831	0.054366
0.022225	0.906667	0.0	0.071108
0.017799	0.926168	0.009434	0.0466
0.126388	0.16367	0.0	0.709941
0.016777	0.069181	0.914042	0.0

MOTIF	Hindbrain_P0_H3K4me2_60_86_0.573_2.397193e-231
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.018578	0.956317	0.025105	0.0
0.06646	0.035871	0.805992	0.091676
0.05141	0.019555	0.855351	0.073683
0.0	0.950856	0.009268	0.039876
0.012114	0.059076	0.0643	0.864511
0.007633	0.354887	0.0	0.63748
0.0	0.955215	0.0	0.044785
0.189288	0.763526	0.016072	0.031114
0.019786	0.866792	0.037414	0.076008
0.063565	0.257841	0.202175	0.47642

MOTIF	Limb_E13.5_H3K4me2_87_83_0.523_2.227838e-28
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.54782	0.0	0.0	0.45218
0.018449	0.956071	0.0	0.02548
0.065966	0.051089	0.62927	0.253675
0.008546	0.04576	0.91098	0.034714
0.128507	0.744502	0.035198	0.091793
0.029659	0.033748	0.0	0.936593
0.016571	0.628476	0.0	0.354953
0.013436	0.938451	0.011949	0.036164
0.179134	0.776852	0.0	0.044015
0.066943	0.897094	0.0	0.035963

MOTIF	Cranio-Facial_E12.5_H3K4me2_34_65_0.603_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.010721	0.964118	0.0	0.025161
0.031824	0.089045	0.863396	0.015735
0.078719	0.024126	0.689884	0.20727
0.0	0.8536	0.086496	0.059904
0.019469	0.008039	0.0	0.972492
0.002461	0.763601	0.0	0.233937
0.149067	0.621991	0.01187	0.217072
0.105105	0.818333	0.042118	0.034444
0.017375	0.710415	0.099646	0.172564

MOTIF	Midbrain_E15.5_H3K4me2_62_88_0.576_8.78744e-250
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.965583	0.0	0.034417
0.056218	0.0	0.901649	0.042133
0.028303	0.005432	0.607784	0.35848
0.02013	0.899896	0.021931	0.058043
0.011247	0.0	0.120597	0.868156
0.005148	0.665455	0.017523	0.311874
0.129228	0.826384	0.0	0.044388
0.151636	0.795613	0.031	0.021751
0.049725	0.881948	0.0	0.068327