MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Neural-Tube_E12.5_H3K9me3_71_85_0.518_6.805603e-18
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.016341	0.862469	0.049597	0.071594
0.029297	0.018062	0.006924	0.945716
0.037056	0.000576	0.686339	0.27603
0.011198	0.015396	0.919665	0.053741
0.006814	0.918081	0.067125	0.00798
0.009778	0.089566	0.000485	0.90017
0.012369	0.067809	0.051672	0.86815
0.500411	0.230695	0.230679	0.038215
0.004522	0.757498	0.0	0.23798

MOTIF	Hindbrain_E13.5_H3K9me3_82_43_0.516_2.766837e-16
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.062442	0.841308	0.011459	0.08479
0.010069	0.01817	0.003255	0.968505
0.038384	0.005581	0.828624	0.127411
0.013162	0.03871	0.89114	0.056987
0.005207	0.791555	0.131035	0.072203
0.01998	0.050315	0.002053	0.927653
0.020352	0.21603	0.018034	0.745584
0.616169	0.178242	0.136169	0.06942
0.04338	0.853859	0.002239	0.100522

MOTIF	Neural-Tube_E13.5_H3K9me3_121_88_0.507_1.304762e-10
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.077583	0.769298	0.076446	0.076674
0.015048	0.01146	0.001403	0.972089
0.068206	0.000202	0.874546	0.057046
0.021216	0.080951	0.856841	0.040992
0.002174	0.78404	0.118691	0.095096
0.033959	0.074601	0.010808	0.880632
0.005238	0.11951	0.029415	0.845837
0.537014	0.300914	0.140781	0.021291
0.039622	0.870178	0.008722	0.081477

MOTIF	Heart_E13.5_H3K9me3_20_5_0.540_2.12339e-170
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.063569	0.034777	0.024051	0.877603
0.024625	0.000788	0.846016	0.128571
0.013677	0.075859	0.887537	0.022927
0.026372	0.891673	0.040714	0.041241
0.03186	0.044275	0.009322	0.914543
0.020098	0.244515	0.028145	0.707243
0.805069	0.16585	0.016805	0.012275
0.014981	0.849774	0.004265	0.13098
0.950102	0.003975	0.013415	0.032509
0.140106	0.136446	0.415203	0.308245

MOTIF	Forebrain_E12.5_H3K9me3_42_93_0.524_5.220694e-26
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.012747	0.015753	0.002777	0.968723
0.083732	0.005947	0.853441	0.05688
0.003366	0.015382	0.938842	0.04241
0.054441	0.83813	0.030838	0.076591
0.023281	0.205363	0.005563	0.765793
0.069307	0.066464	0.005956	0.858273
0.591946	0.358759	0.032099	0.017196
0.0	0.817283	0.013176	0.169541
0.907017	0.023066	0.066379	0.003538

MOTIF	Kidney_E15.5_H3K9me3_24_106_0.523_6.605884e-16
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.045637	0.004863	0.097591	0.851908
0.104783	0.003775	0.817387	0.074055
0.028687	0.027874	0.890884	0.052554
0.069675	0.760521	0.047447	0.122358
0.13038	0.153928	0.002641	0.713051
0.034523	0.062411	0.057458	0.845608
0.628387	0.328258	0.027352	0.016003
0.010682	0.82937	0.012472	0.147476
0.938975	0.017151	0.037727	0.006147

MOTIF	Lung_E15.5_H3K9me3_23_117_0.521_1.961322e-05
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.023291	0.015478	0.015359	0.945873
0.049255	0.015802	0.904067	0.030876
0.058142	0.030645	0.906886	0.004326
0.029688	0.721527	0.143267	0.105518
0.021699	0.038665	0.013439	0.926197
0.004015	0.077341	0.030138	0.888505
0.918722	0.049319	0.006911	0.025048
0.022379	0.541891	0.15844	0.27729
0.918735	0.029601	0.017076	0.034588
0.232911	0.125119	0.426394	0.215577

MOTIF	Midbrain_E13.5_H3K9me3_35_16_0.530_2.069195e-22
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.141291	0.330189	0.158389	0.370131
0.075588	0.830282	0.025089	0.069041
0.038096	0.01093	0.011239	0.939735
0.064093	0.046788	0.88511	0.00401
0.09646	0.023112	0.124602	0.755826
0.721474	0.011384	0.226947	0.040196
0.805035	0.004986	0.15879	0.031189
0.069464	0.100534	0.782064	0.047938
0.106553	0.732983	0.070015	0.09045
0.070189	0.892284	0.012701	0.024826

MOTIF	Intestine_P0_H3K9me3_22_52_0.535_1.289703e-14
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.058685	0.827627	0.010683	0.103005
0.061664	0.024286	0.007705	0.906345
0.102769	0.052267	0.827467	0.017496
0.05419	0.024293	0.203206	0.718312
0.804931	0.021644	0.171615	0.001811
0.897168	0.008435	0.069196	0.025201
0.067862	0.083226	0.823473	0.025439
0.138144	0.780112	0.029215	0.052528
0.173769	0.77931	0.012253	0.034668
0.592643	0.180012	0.023603	0.203742
0.309669	0.136916	0.474674	0.078742

MOTIF	Heart_E12.5_H3K9me3_11_8_0.547_3.846042e-257
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.034683	0.869747	0.014133	0.081437
0.073893	0.00828	0.00756	0.910268
0.057448	0.033393	0.895504	0.013655
0.074669	0.0534	0.235364	0.636567
0.688876	0.02545	0.246744	0.03893
0.896299	0.00437	0.071546	0.027786
0.048062	0.068258	0.851191	0.032489
0.067957	0.839546	0.035269	0.057227
0.120188	0.81701	0.010207	0.052595
0.737806	0.149189	0.024692	0.088313

MOTIF	Heart_E15.5_H3K9me3_50_44_0.519_9.65926e-10
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.039457	0.816655	0.008456	0.135431
0.048344	0.032982	0.009344	0.90933
0.044049	0.010051	0.937277	0.008623
0.038987	0.028622	0.279149	0.653241
0.706862	0.023944	0.212201	0.056993
0.747342	0.008306	0.176572	0.06778
0.050435	0.031323	0.895325	0.022918
0.132436	0.795028	0.048605	0.023931
0.040821	0.86429	0.00859	0.086299
0.732409	0.060059	0.086449	0.121083

MOTIF	Hindbrain_E13.5_H3K9me3_23_4_0.531_6.11063e-52
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.05243	0.884809	0.021966	0.040795
0.078266	0.018432	0.007706	0.895596
0.097914	0.004323	0.891061	0.006702
0.029604	0.027639	0.228152	0.714605
0.751536	0.023611	0.175307	0.049546
0.858718	0.004356	0.10056	0.036366
0.052153	0.039694	0.8615	0.046654
0.089555	0.787413	0.069449	0.053583
0.159645	0.764484	0.006083	0.069788
0.621389	0.179803	0.140835	0.057973

MOTIF	Neural-Tube_E12.5_H3K9me3_31_8_0.529_3.999668e-60
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.035328	0.908267	0.019012	0.037394
0.058013	0.018463	0.009607	0.913918
0.036103	0.026592	0.931838	0.005467
0.062947	0.031819	0.17602	0.729214
0.726005	0.020116	0.206517	0.047362
0.853015	0.004015	0.119081	0.023889
0.042158	0.052764	0.86551	0.039569
0.091811	0.821323	0.03235	0.054516
0.171973	0.728856	0.015706	0.083465
0.570579	0.215693	0.143211	0.070517

MOTIF	Neural-Tube_E13.5_H3K9me3_29_3_0.531_9.303034e-49
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.076735	0.820786	0.02128	0.081199
0.119487	0.020581	0.004368	0.855564
0.126787	0.000694	0.871807	0.000711
0.037986	0.036328	0.092333	0.833352
0.811143	0.003218	0.169682	0.015957
0.866927	0.003412	0.088813	0.040847
0.085045	0.029328	0.834968	0.050658
0.048446	0.843414	0.047945	0.060196
0.205773	0.767576	0.003036	0.023615
0.540468	0.176728	0.185778	0.097026

MOTIF	Neural-Tube_E15.5_H3K9me3_100_95_0.508_8.790291e-25
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.128869	0.004742	0.866389
0.044775	0.007837	0.872393	0.074995
0.034482	0.359128	0.604544	0.001847
0.0	0.906223	0.085155	0.008622
0.024463	0.229557	0.0	0.74598
0.016745	0.044581	0.067958	0.870716
0.95256	0.029822	0.017618	0.0
0.00844	0.954194	0.005197	0.032169
0.866646	0.067102	0.032338	0.033915
0.343485	0.02216	0.345736	0.288619