MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Forebrain_P0_H3K4me2_94_104_0.510_7.925889e-30
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.168123	0.639101	0.026533	0.166242
0.0	0.815999	0.151948	0.032053
0.00975	0.806905	0.058405	0.12494
0.226661	0.046498	0.726841	0.0
0.90309	0.013943	0.0393	0.043667
0.019063	0.078494	0.890633	0.01181
0.058872	0.0	0.040912	0.900216
0.008395	0.938854	0.0	0.052751
0.007896	0.892673	0.052158	0.047274

MOTIF	Hindbrain_E11.5_H3K4me2_85_105_0.522_1.337727e-70
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.010608	0.786766	0.172804	0.029822
0.0	0.983524	0.016476	0.0
0.114064	0.837797	0.033628	0.014511
0.208468	0.02849	0.754369	0.008673
0.832077	0.011514	0.111751	0.044657
0.019314	0.025342	0.955344	0.0
0.087713	0.0	0.0	0.912287
0.0	0.930746	0.058365	0.010889
0.0	0.441536	0.159781	0.398683

MOTIF	Hindbrain_E11.5_H3K4me2_88_97_0.506_7.952906e-37
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.007164	0.933185	0.048507	0.011143
0.207052	0.649435	0.013496	0.130018
0.069097	0.052258	0.877473	0.001171
0.763129	0.031843	0.021668	0.18336
0.015625	0.028099	0.931103	0.025172
0.066259	0.059507	0.046102	0.828132
0.0	0.847384	0.026703	0.125913
0.095966	0.738797	0.017227	0.14801
0.097582	0.811454	0.059727	0.031237

MOTIF	Kidney_E16.5_H3K4me2_93_82_0.515_1.338887e-34
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.226484	0.256545	0.072565	0.444406
0.003201	0.926764	0.020231	0.049804
0.188971	0.71546	0.042356	0.053212
0.137228	0.047025	0.815748	0.0
0.847946	0.036634	0.072661	0.042759
0.001384	0.026324	0.957668	0.014624
0.023268	0.048354	0.015266	0.913113
0.004288	0.809232	0.048073	0.138406
0.121826	0.647696	0.027631	0.202847
0.007619	0.915111	0.011066	0.066205

MOTIF	Neural-Tube_E11.5_H3K4me2_65_65_0.559_4.727667e-134
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.003781	0.810857	0.089488	0.095874
0.154238	0.646516	0.00612	0.193126
0.103635	0.039949	0.852303	0.004112
0.765082	0.077885	0.079025	0.078008
0.034249	0.041738	0.914828	0.009184
0.117521	0.021496	0.016097	0.844885
0.015943	0.959369	0.001942	0.022746
0.119135	0.705625	0.031073	0.144166
0.020266	0.80025	0.164433	0.01505
0.102749	0.19437	0.536781	0.1661
0.451906	0.0	0.506333	0.041761

MOTIF	Neural-Tube_E14.5_H3K4me3_85_117_0.551_2.070847e-89
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.210002	0.65471	0.029033	0.106255
0.004361	0.94589	0.047971	0.001777
0.025283	0.844278	0.0	0.130439
0.193396	0.003619	0.798043	0.004942
0.821792	0.037766	0.086861	0.053582
0.011995	0.050116	0.937889	0.0
0.083905	0.0	0.0	0.916095
0.005895	0.739809	0.233731	0.020565
0.010469	0.730623	0.193268	0.06564

MOTIF	Midbrain_E12.5_H3K4me3_86_98_0.510_1.757915e-33
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.00634	0.889588	0.020303	0.083768
0.18256	0.621033	0.0286	0.167807
0.119	0.084678	0.794092	0.002229
0.745528	0.052084	0.094532	0.107857
0.008118	0.027197	0.944314	0.020371
0.16308	0.051101	0.047328	0.738491
0.039257	0.857515	0.051464	0.051764
0.07437	0.886125	0.019167	0.020338
0.006856	0.818197	0.008259	0.166689

MOTIF	Neural-Tube_E15.5_H3K4me3_83_126_0.509_2.606235e-38
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.004483	0.968014	0.006642	0.020861
0.034901	0.656402	0.055489	0.253207
0.166349	0.092674	0.733746	0.007231
0.806402	0.074714	0.030384	0.088501
0.009239	0.055514	0.935247	0.0
0.144622	0.0	0.0	0.855378
0.03163	0.883026	0.041517	0.043827
0.021647	0.758734	0.035373	0.184245
0.022534	0.759554	0.0	0.217912

MOTIF	Heart_E16.5_H3K9ac_87_95_0.503_1.430485e-15
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.175228	0.584788	0.033767	0.206218
0.0	0.958957	0.025816	0.015226
0.017598	0.773444	0.019582	0.189376
0.218675	0.130463	0.650862	0.0
0.756147	0.091571	0.061911	0.090372
0.073791	0.06172	0.844113	0.020376
0.064151	0.074504	0.0	0.861345
0.009767	0.943379	0.024756	0.022098
0.012041	0.90045	0.022838	0.064671

MOTIF	Heart_P0_H3K9ac_74_76_0.517_2.195154e-29
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.193989	0.695918	0.087547	0.022546
0.302155	0.612316	0.057167	0.028362
0.001196	0.894546	0.015382	0.088875
0.031962	0.856871	0.028361	0.082806
0.146902	0.034988	0.812497	0.005612
0.820858	0.080285	0.025899	0.072958
0.025395	0.015762	0.890179	0.068664
0.042364	0.051105	0.113754	0.792777
0.054789	0.811435	0.019842	0.113935
0.022911	0.953192	0.00942	0.014477
0.382237	0.464418	0.0	0.153345

MOTIF	Limb_E12.5_H3K9ac_70_104_0.516_8.710353e-31
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.007483	0.957957	0.0	0.03456
0.044223	0.872297	0.05089	0.03259
0.313243	0.0	0.685268	0.001489
0.864987	0.0	0.045063	0.089951
0.013962	0.086656	0.892983	0.006398
0.121819	0.035393	0.0257	0.817088
0.017237	0.919839	0.0	0.062924
0.014268	0.836964	0.0	0.148768
0.152988	0.643015	0.013163	0.190834

MOTIF	Liver_E11.5_H3K9ac_67_62_0.524_7.740869e-23
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.0	0.0	0.975879	0.024121
0.614481	0.070734	0.314785	0.0
0.02325	0.86826	0.011511	0.096979
0.024623	0.889782	0.02908	0.056515
0.061476	0.064918	0.868378	0.005227
0.853343	0.025721	0.030821	0.090114
0.014365	0.026678	0.949032	0.009926
0.463567	0.023927	0.052521	0.459985
0.036922	0.886549	0.047132	0.029396
0.149894	0.817077	0.007191	0.025838
0.070504	0.842275	0.054706	0.032515

MOTIF	Cranio-Facial_E14.5_H3K9ac_93_113_0.503_1.086773e-08
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.009164	0.959508	0.031328	0.0
0.031374	0.648515	0.010564	0.309547
0.139996	0.074596	0.783967	0.001441
0.840145	0.0	0.064778	0.095078
0.011547	0.0	0.981934	0.006519
0.088197	0.040208	0.023621	0.847973
0.087413	0.795854	0.03895	0.077783
0.113011	0.626294	0.008341	0.252354
0.005679	0.93538	0.019072	0.039869

MOTIF	Intestine_E14.5_H3K9ac_53_60_0.575_1.332877e-108
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.005891	0.824921	0.116006	0.053182
0.104628	0.828689	0.0	0.066683
0.12089	0.040049	0.835831	0.00323
0.797024	0.065682	0.075038	0.062256
0.021617	0.016491	0.95172	0.010171
0.068576	0.0	0.038089	0.893335
0.050094	0.655939	0.154884	0.139082
0.092695	0.703268	0.075462	0.128575
0.013129	0.944773	0.018647	0.023451
0.173383	0.10284	0.399492	0.324285

MOTIF	Neural-Tube_E11.5_H3K9ac_57_71_0.570_3.13038e-115
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.126334	0.0	0.751336	0.12233
0.0	0.950488	0.009336	0.040176
0.289782	0.65413	0.037385	0.018702
0.020687	0.038735	0.932972	0.007605
0.877885	0.022786	0.034021	0.065309
0.015712	0.063469	0.918955	0.001864
0.328528	0.021282	0.027502	0.622687
0.093299	0.807148	0.056613	0.042939
0.154021	0.68479	0.037955	0.123234
0.080566	0.88614	0.0	0.033293
0.024525	0.0	0.912425	0.06305