MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Midbrain_P0_H3K4me2_84_111_0.513_2.291917e-18
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.167644	0.0	0.832356	0.0
0.040657	0.849988	0.048986	0.060369
0.255665	0.12834	0.551054	0.064942
0.118604	0.869455	0.011941	0.0
0.039988	0.027315	0.116308	0.816389
0.0	0.028624	0.966854	0.004522
0.016935	0.027906	0.94252	0.012639
0.289837	0.034858	0.653081	0.022225
0.903457	0.028667	0.030916	0.03696

MOTIF	Forebrain_E15.5_H3K4me2_68_57_0.547_2.062234e-229
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.037307	0.040615	0.869989	0.052088
0.056827	0.815195	0.017491	0.110487
0.317244	0.439429	0.058441	0.184885
0.006571	0.892697	0.100732	0.0
0.91475	0.03866	0.0	0.046591
0.00353	0.059193	0.861089	0.076187
0.11449	0.683024	0.073162	0.129324
0.033732	0.020627	0.891467	0.054174
0.022826	0.929633	0.0	0.047541

MOTIF	Heart_E12.5_H3K4me2_65_49_0.525_4.215238e-41
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.276284	0.355651	0.019316	0.34875
0.012348	0.035017	0.708999	0.243636
0.037471	0.953375	0.003432	0.005722
0.270522	0.633654	0.040883	0.054941
0.0	0.974134	0.022662	0.003204
0.840995	0.077803	0.027801	0.053401
0.0	0.031219	0.964972	0.003809
0.258317	0.521393	0.038889	0.1814
0.020071	0.028721	0.78537	0.165838
0.03124	0.890599	0.03938	0.038781

MOTIF	Heart_E13.5_H3K4me2_79_75_0.515_4.685862e-52
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.004344	0.018999	0.757343	0.219315
0.130502	0.779857	0.0	0.089641
0.126478	0.750711	0.054286	0.068525
0.0	0.984247	0.015753	0.0
0.81592	0.02801	0.025934	0.130136
0.0	0.035825	0.95954	0.004635
0.262467	0.467007	0.036545	0.233981
0.003474	0.039611	0.956914	0.0
0.178971	0.751205	0.038464	0.03136

MOTIF	Heart_E11.5_H3K4me2_31_27_0.592_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.106779	0.731658	0.043795	0.117767
0.337675	0.519046	0.100991	0.042288
0.0	0.94948	0.010308	0.040212
0.849653	0.06894	0.040297	0.041111
0.0	0.060188	0.808464	0.131348
0.026605	0.800892	0.165901	0.006602
0.021715	0.014883	0.951182	0.01222
0.122643	0.814928	0.035836	0.026592
0.029028	0.017561	0.928229	0.025182

MOTIF	Neural-Tube_E12.5_H3K4me2_42_35_0.594_5.553886e-314
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.812003	0.022127	0.16587
0.052605	0.818091	0.076426	0.052879
0.006311	0.941746	0.051944	0.0
0.777963	0.05203	0.04153	0.128476
0.051371	0.039617	0.784626	0.124386
0.063044	0.868961	0.052521	0.015474
0.034461	0.020503	0.886868	0.058168
0.274734	0.716085	0.0	0.009181
0.088336	0.025014	0.627891	0.258759
0.068661	0.646839	0.160419	0.124081

MOTIF	Hindbrain_E11.5_H3K4me2_50_26_0.607_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.085514	0.79158	0.050576	0.072331
0.105296	0.81481	0.054782	0.025112
0.0	0.95656	0.035277	0.008163
0.774649	0.103476	0.051975	0.069901
0.0	0.063421	0.887427	0.049152
0.20265	0.691789	0.03272	0.072841
0.050852	0.018015	0.902599	0.028533
0.135464	0.676558	0.073001	0.114977
0.006279	0.082389	0.768499	0.142833

MOTIF	Cranio-Facial_E11.5_H3K4me2_51_39_0.603_1.306609e-311
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.020006	0.840778	0.020659	0.118557
0.060109	0.904716	0.016411	0.018764
0.0	0.842111	0.113509	0.04438
0.772229	0.0	0.065686	0.162085
0.0	0.01142	0.860357	0.128223
0.036536	0.806783	0.057752	0.098928
0.025114	0.002287	0.878482	0.094117
0.195265	0.721748	0.071686	0.011301
0.087264	0.029124	0.688871	0.19474

MOTIF	Neural-Tube_E15.5_H3K4me2_39_27_0.602_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.10194	0.732667	0.023605	0.141788
0.119638	0.800012	0.063562	0.016789
0.004377	0.930616	0.015907	0.0491
0.760049	0.04532	0.069435	0.125196
0.00438	0.068939	0.823821	0.10286
0.03779	0.799213	0.087737	0.075261
0.089128	0.011451	0.863517	0.035904
0.06149	0.781003	0.13541	0.022097
0.157915	0.040524	0.744482	0.057079

MOTIF	Cranio-Facial_E14.5_H3K9ac_58_22_0.564_1.733329e-150
letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1
0.08631	0.841871	0.017786	0.054033
0.253299	0.631189	0.081901	0.033612
0.0	0.958867	0.034072	0.007062
0.912045	0.021274	0.020538	0.046143
0.006031	0.048752	0.834981	0.110236
0.199398	0.769454	0.019614	0.011535
0.152325	0.012418	0.7374	0.097857
0.03419	0.883633	0.05555	0.026627
0.08562	0.085912	0.744299	0.084169
0.079838	0.287378	0.297385	0.335399
0.211394	0.0	0.532621	0.255985
0.456797	0.543203	0.0	0.0

MOTIF	Neural-Tube_E11.5_H3K9ac_28_32_0.617_1.75417e-310
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.193429	0.512694	0.068618	0.225259
0.021081	0.940909	0.038009	0.0
0.777569	0.037927	0.088405	0.0961
0.078679	0.06516	0.746589	0.109572
0.04842	0.830245	0.02478	0.096555
0.132293	0.006049	0.821592	0.040066
0.020752	0.835357	0.003448	0.140443
0.028627	0.054355	0.906168	0.010849
0.126235	0.827321	0.003702	0.042741

MOTIF	Intestine_E14.5_H3K9ac_29_28_0.627_1.501966e-314
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.12618	0.737462	0.021471	0.114888
0.154504	0.672141	0.07025	0.103105
0.0	0.960207	0.039793	0.0
0.714416	0.04025	0.081854	0.16348
0.011059	0.030035	0.868769	0.090138
0.032514	0.923732	0.02804	0.015714
0.141416	0.044756	0.706615	0.107213
0.020156	0.745963	0.137909	0.095971
0.055497	0.013669	0.878169	0.052666

MOTIF	Intestine_P0_H3K9ac_40_37_0.597_1.692846e-230
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.128628	0.799966	0.028274	0.043132
0.196131	0.695109	0.04307	0.06569
0.0	0.974612	0.0238	0.001588
0.740797	0.046646	0.049304	0.163253
0.003996	0.067477	0.87017	0.058356
0.050544	0.732796	0.04381	0.172849
0.107353	0.020623	0.818142	0.053881
0.013274	0.817654	0.016351	0.152721
0.072043	0.032251	0.868521	0.027184

MOTIF	Limb_E14.5_H3K9ac_31_27_0.599_2.245533e-310
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.08187	0.750931	0.063409	0.10379
0.194693	0.635078	0.052028	0.1182
0.0	0.912343	0.065923	0.021734
0.797321	0.101284	0.019299	0.082096
0.0	0.063873	0.924543	0.011584
0.145061	0.706856	0.037563	0.11052
0.089898	0.039037	0.820549	0.050515
0.024083	0.76563	0.039938	0.17035
0.024912	0.046731	0.884925	0.043432

MOTIF	Neural-Tube_E14.5_H3K9ac_55_38_0.575_1.405873e-234
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.068233	0.7531	0.04526	0.133407
0.058087	0.808198	0.014753	0.118961
0.0	0.98433	0.009396	0.006274
0.803388	0.042332	0.06426	0.09002
0.0	0.013285	0.872098	0.114617
0.181321	0.684045	0.047601	0.087033
0.049049	0.038129	0.875426	0.037397
0.024816	0.724104	0.129905	0.121175
0.024015	0.143937	0.70212	0.129928