MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Liver_E16.5_H3K27me3_40_70_0.538_3.993632e-27
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.641167	0.098427	0.05708	0.203326
0.011454	0.034141	0.93691	0.017494
0.06698	0.895697	0.0	0.037323
0.046437	0.047458	0.682008	0.224097
0.0	0.640227	0.0	0.359773
0.030116	0.826973	0.035085	0.107826
0.0	0.851808	0.148192	0.0
0.820437	0.022902	0.05262	0.104042
0.0	0.071318	0.922521	0.006161

MOTIF	Forebrain_E14.5_H3K4me2_28_43_0.621_4.411973e-317
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.0	0.869682	0.130318	0.0
0.299586	0.032372	0.161347	0.506696
0.001272	0.014919	0.983809	0.0
0.042042	0.040007	0.917951	0.0
0.564968	0.0	0.417202	0.01783
0.065854	0.93356	0.0	0.000586
0.020686	0.0	0.967537	0.011777
0.104758	0.891031	0.0	0.004211

MOTIF	Cranio-Facial_E12.5_H3K4me2_47_61_0.579_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.949859	0.050141	0.0
0.129913	0.033467	0.0	0.83662
0.004587	0.047988	0.947425	0.0
0.028693	0.124577	0.525144	0.321585
0.315772	0.044941	0.54185	0.097437
0.043196	0.928457	0.014075	0.014273
0.042854	0.038608	0.904319	0.014219
0.075751	0.815922	0.011207	0.09712
0.019895	0.942043	0.038062	0.0

MOTIF	Midbrain_E14.5_H3K4me2_87_84_0.531_2.594794e-160
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.94811	0.05189	0.0
0.174272	0.0	0.057034	0.768695
0.0	0.0	1.0	0.0
0.014834	0.104901	0.845031	0.035234
0.263849	0.022621	0.693937	0.019593
0.073298	0.857681	0.043167	0.025854
0.210225	0.0	0.713829	0.075946
0.133877	0.68436	0.040418	0.141344
0.022715	0.927867	0.026235	0.023182

MOTIF	Midbrain_E16.5_H3K4me2_59_49_0.573_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.014417	0.930994	0.054589	0.0
0.305486	0.02936	0.616227	0.048928
0.126145	0.035733	0.758782	0.079341
0.073128	0.826978	0.059711	0.040184
0.050296	0.0	0.874873	0.074831
0.054934	0.801918	0.027795	0.115353
0.033252	0.71965	0.029301	0.217798
0.023334	0.947042	0.020465	0.009158
0.829357	0.0	0.023911	0.146732

MOTIF	Hindbrain_P0_H3K4me3_55_31_0.596_3.087899e-220
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.548942	0.151804	0.24382	0.055434
0.016288	0.896843	0.069892	0.016978
0.227654	0.064221	0.687437	0.020688
0.024934	0.748269	0.029962	0.196835
0.132765	0.060741	0.786688	0.019806
0.088541	0.854524	0.027623	0.029312
0.257584	0.609242	0.067107	0.066068
0.007171	0.918289	0.066676	0.007864
0.947736	0.0	0.015318	0.036946
0.004985	0.012729	0.950751	0.031535
0.25251	0.684939	0.04739	0.015162

MOTIF	Heart_E14.5_H3K4me3_49_72_0.602_1.43793e-315
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.073968	0.852338	0.026578	0.047117
0.048316	0.032914	0.888894	0.029876
0.013569	0.893361	0.009476	0.083593
0.12115	0.72252	0.005295	0.151034
0.0	0.92837	0.07163	0.0
0.888663	0.0	0.0	0.111337
0.0	0.0592	0.866713	0.074088
0.379314	0.595054	0.005535	0.020097
0.260737	0.021803	0.673295	0.044165

MOTIF	Kidney_E14.5_H3K4me3_77_61_0.568_6.428035e-131
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.085055	0.029758	0.885187	0.0
0.365325	0.608311	0.0	0.026364
0.014819	0.008265	0.950988	0.025927
0.012316	0.776218	0.044069	0.167398
0.042717	0.902656	0.023211	0.031416
0.0	0.913401	0.059355	0.027244
0.779153	0.013029	0.101409	0.10641
0.0	0.020567	0.969734	0.009698
0.326447	0.572284	0.087251	0.014018

MOTIF	Limb_E12.5_H3K4me3_46_28_0.613_1.32514e-295
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.258889	0.336845	0.330306	0.073961
0.143448	0.19282	0.426353	0.237379
0.113738	0.040649	0.791118	0.054495
0.030013	0.821354	0.032344	0.116288
0.099348	0.043939	0.816129	0.040584
0.02249	0.746201	0.08301	0.148299
0.123519	0.703894	0.065661	0.106927
0.011758	0.911677	0.038465	0.0381
0.723155	0.033134	0.050117	0.193595
0.0	0.036645	0.951981	0.011374
0.077799	0.874865	0.036806	0.01053

MOTIF	Liver_E13.5_H3K4me3_43_46_0.587_1.797239e-217
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.022173	0.040983	0.936844	0.0
0.043156	0.934107	0.0	0.022737
0.0	0.034133	0.926308	0.039559
0.012433	0.913302	0.016907	0.057358
0.042825	0.535562	0.067132	0.354482
0.032951	0.880056	0.0	0.086993
0.594235	0.0	0.039595	0.36617
0.0	0.008894	0.981028	0.010078
0.0	0.970361	0.010973	0.018665
0.617199	0.0	0.274804	0.107996

MOTIF	Midbrain_E12.5_H3K4me3_67_58_0.585_1.228725e-160
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.021361	0.074485	0.878699	0.025455
0.076647	0.585418	0.027447	0.310487
0.003208	0.067387	0.90585	0.023554
0.061686	0.88199	0.041945	0.014378
0.267032	0.372025	0.081303	0.27964
0.003739	0.968638	0.027623	0.0
0.911203	0.020179	0.011238	0.05738
0.005662	0.036612	0.954589	0.003137
0.064301	0.907121	0.010368	0.01821
0.252094	0.075273	0.587284	0.085349

MOTIF	Kidney_P0_H3K4me2_103_52_0.521_2.806275e-17
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.033195	0.02188	0.830565	0.11436
0.242426	0.552676	0.017489	0.187409
0.046377	0.028275	0.89061	0.034739
0.011002	0.839015	0.013584	0.136399
0.311566	0.480315	0.071425	0.136694
0.0	0.943279	0.056592	0.000129
0.900405	0.004049	0.004494	0.091052
0.0	0.026733	0.964212	0.009054
0.048928	0.907525	0.021271	0.022276
0.241778	0.114902	0.040647	0.602673

MOTIF	Kidney_E15.5_H3K9ac_44_34_0.617_4.892458e-310
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.048049	0.89784	0.036875	0.017236
0.011416	0.04811	0.876262	0.064212
0.202257	0.57992	0.065414	0.15241
0.020304	0.038888	0.728824	0.211984
0.066299	0.748462	0.05928	0.125959
0.204348	0.682376	0.09309	0.020186
0.0	0.877959	0.082264	0.039777
0.902371	0.005688	0.022193	0.069748
0.002821	0.048038	0.944128	0.005013
0.401416	0.321398	0.259283	0.017903

MOTIF	Limb_E15.5_H3K9ac_58_56_0.571_1.108796e-56
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.028404	0.031478	0.916612	0.023506
0.216582	0.695126	0.050171	0.038121
0.129124	0.019867	0.808106	0.042903
0.024889	0.944924	0.013351	0.016837
0.206769	0.454292	0.075289	0.26365
0.0	0.895028	0.042781	0.062191
0.798933	0.062513	0.059683	0.078872
0.0	0.017106	0.982823	7.1e-05
0.042233	0.916107	0.031462	0.010198
0.215693	0.080073	0.313196	0.391038

MOTIF	Lung_E14.5_H3K9ac_44_59_0.582_5.309427e-224
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.040381	0.036174	0.923445	0.0
0.03131	0.863908	0.049859	0.054923
0.055745	0.053469	0.840313	0.050473
0.0	0.696747	0.017229	0.286025
0.36711	0.361679	0.08113	0.190081
0.0	0.959251	0.040749	0.0
0.781226	0.047956	0.008308	0.16251
0.0	0.036759	0.951624	0.011617
0.107774	0.795429	0.063186	0.03361
0.316569	0.041272	0.417859	0.2243