MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Forebrain_P0_H3K9me3_2_21_0.549_9.46833e-28
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.51991	0.013522	0.403703	0.062864
0.0	0.986661	0.013339	0.0
0.111831	0.001585	0.092646	0.793938
0.013089	0.027753	0.93947	0.019688
0.704904	0.121996	0.1731	0.0
0.0	0.011728	0.001528	0.986744
0.01448	0.003796	0.407569	0.574155
0.016778	0.972643	0.001445	0.009134
0.884003	0.031694	0.022239	0.062064

MOTIF	Cranio-Facial_E14.5_H3K9me3_70_63_0.517_6.252649e-47
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.037528	0.087385	0.875087	0.0
0.886092	0.03838	0.004881	0.070646
0.762462	0.073344	0.134473	0.029721
0.089084	0.051096	0.03755	0.822271
0.00112	0.753682	0.245198	0.0
0.897872	0.007432	0.004808	0.089888
0.001318	0.051986	0.943746	0.002951
0.032239	0.297482	0.001727	0.668551
0.307079	0.588646	0.036746	0.067529

MOTIF	Cranio-Facial_E14.5_H3K9me3_39_76_0.525_3.893935e-41
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.533229	0.002537	0.282085	0.18215
0.0	0.990498	0.009502	0.0
0.021472	0.013073	0.048759	0.916696
0.021368	0.124921	0.796115	0.057595
0.881145	0.04972	0.051677	0.017458
0.0	0.077445	0.187356	0.735199
0.140226	0.002606	0.0	0.857168
0.0	0.999176	0.0	0.000824
0.886268	0.026876	0.046629	0.040228

MOTIF	Hindbrain_E14.5_H3K9me3_44_50_0.522_2.351489e-26
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.612947	0.0	0.381892	0.005161
0.022163	0.961327	0.006994	0.009516
0.0	0.005038	0.065893	0.929069
0.017729	0.012437	0.931354	0.03848
0.756657	0.069602	0.093483	0.080258
0.07853	0.004273	0.155213	0.761984
0.115928	0.0	0.134994	0.749078
0.0	0.942688	0.0	0.057312
0.91863	0.004724	0.036053	0.040593

MOTIF	Hindbrain_P0_H3K9me3_24_64_0.525_1.343431e-10
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.488972	0.002371	0.0	0.508657
0.019742	0.0	0.977262	0.002995
0.855319	0.086762	0.0	0.057919
0.963112	0.0	0.036888	0.0
0.058272	0.012306	0.010771	0.918651
0.014819	0.636574	0.348607	0.0
0.948989	0.010394	0.0	0.040617
0.0	0.0	1.0	0.0

MOTIF	Midbrain_E16.5_H3K9me3_9_6_0.531_3.113654e-28
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.859431	0.021285	0.029292	0.089992
0.0	0.961713	0.032356	0.005931
0.118004	0.006488	0.094889	0.780619
0.008325	0.035701	0.947865	0.00811
0.414796	0.010137	0.121088	0.453979
0.005048	0.037346	0.028927	0.928679
0.00483	0.035133	0.026793	0.933244
0.001529	0.983296	0.011511	0.003664
0.922211	0.018771	0.059018	0.0

MOTIF	Hindbrain_E16.5_H3K9me3_42_53_0.525_6.078283e-18
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.578709	0.010771	0.148349	0.262172
0.087553	0.0	0.912447	0.0
0.746116	0.162583	0.065184	0.026116
0.655287	0.025651	0.028506	0.290555
0.221195	0.0	0.008345	0.77046
0.010199	0.706001	0.2838	0.0
0.886798	0.013159	0.010243	0.089799
0.012404	0.01665	0.949861	0.021086
0.013206	0.045196	0.006041	0.935556
0.008699	0.946246	0.036961	0.008095
0.502818	0.0	0.01031	0.486873

MOTIF	Midbrain_P0_H3K9me3_56_19_0.518_2.340601e-06
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.012453	0.0	0.98648	0.001067
0.929742	0.023182	0.003303	0.043773
0.922532	0.003682	0.010956	0.06283
0.401282	0.011634	0.0	0.587084
0.01729	0.693098	0.289613	0.0
0.828791	0.004932	0.104706	0.061571
0.010208	0.0	0.988131	0.00166
0.111288	0.099066	0.024619	0.765027
0.007876	0.977666	0.003659	0.010799
0.665874	0.008092	0.054847	0.271187

MOTIF	Hindbrain_E14.5_H3K9me3_89_5_0.514_1.383831e-21
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.00403	0.99597	0.0
0.948216	0.03791	0.000788	0.013085
0.693551	0.027842	0.210284	0.068323
0.095625	0.004457	0.019521	0.880397
0.0	0.701164	0.298836	0.0
0.95107	0.004262	0.012203	0.032466
0.000733	0.000456	0.957405	0.041406
0.058032	0.074622	0.017317	0.850029
0.0	0.929897	0.039078	0.031025

MOTIF	Forebrain_E16.5_H3K9me3_53_77_0.522_1.608373e-11
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.090583	0.0	0.909417	0.0
0.840235	0.084837	0.069422	0.005506
0.510935	0.002564	0.103235	0.383266
0.083813	0.004893	0.018945	0.892349
0.0	0.820061	0.179939	0.0
0.89784	0.006994	0.025865	0.069301
0.027045	0.005213	0.951625	0.016117
0.002136	0.015718	0.010507	0.971639
0.01246	0.94454	0.02166	0.021339
0.550615	0.0	0.153425	0.29596

MOTIF	Cranio-Facial_E13.5_H3K9me3_55_61_0.521_9.529116e-20
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.079216	0.0	0.920784	0.0
0.896325	0.032652	0.058768	0.012254
0.668998	0.007042	0.084438	0.239522
0.058356	0.003682	0.001171	0.936791
0.001638	0.723473	0.274889	0.0
0.967651	0.002966	0.002278	0.027105
0.021207	0.035393	0.942715	0.000685
0.03423	0.095571	0.01311	0.857089
0.0	0.971402	0.028598	0.0

MOTIF	Limb_E13.5_H3K9me3_93_70_0.516_1.961742e-26
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.048385	0.025313	0.925974	0.000329
0.894246	0.0	0.09595	0.009803
0.544346	0.026984	0.209166	0.219505
0.110719	0.014248	0.001553	0.87348
0.002182	0.763983	0.233835	0.0
0.887803	0.06414	0.026521	0.021537
0.008845	0.015035	0.937135	0.038985
0.032043	0.031333	0.014698	0.921927
0.0	0.967126	0.000537	0.032336

MOTIF	Hindbrain_E13.5_H3K9me3_80_50_0.517_3.990222e-26
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.047516	0.087999	0.850819	0.013666
0.801157	0.062131	0.060804	0.075908
0.592476	0.057357	0.13496	0.215207
0.134891	0.01088	0.160561	0.693668
0.004876	0.757548	0.227046	0.01053
0.846707	0.002421	0.033307	0.117565
0.019266	0.062626	0.909967	0.008141
0.048467	0.179347	0.003985	0.768202
0.009914	0.909243	0.053581	0.027261
0.976332	0.0	0.023668	0.0

MOTIF	Intestine_E14.5_H3K9me3_90_103_0.512_2.995293e-08
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.089055	0.910945	0.0
0.768602	0.078589	0.052113	0.100696
0.565605	0.096183	0.110645	0.227567
0.180177	0.017647	0.007383	0.794792
0.0	0.686381	0.313619	0.0
0.857802	0.004062	0.008418	0.129717
0.00246	0.101672	0.895869	0.0
0.02896	0.112405	0.0	0.858635
0.102765	0.823878	0.011622	0.061734
0.692409	0.0	0.097946	0.209645

MOTIF	Kidney_E16.5_H3K9me3_70_128_0.519_1.017963e-29
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.048793	0.052196	0.899011	0.0
0.843353	0.032763	0.085035	0.038848
0.528676	0.133246	0.102013	0.236065
0.146007	0.000591	0.042204	0.811198
0.0	0.814989	0.185011	0.0
0.869652	0.007592	0.01711	0.105646
0.0	0.034983	0.954709	0.010308
0.009941	0.044148	0.011992	0.933919
0.094566	0.823531	0.037143	0.04476

MOTIF	Neural-Tube_E13.5_H3K9me3_103_44_0.512_1.752906e-17
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.032478	0.049987	0.917535	0.0
0.848898	0.08097	0.021833	0.048298
0.568158	0.201796	0.099404	0.130643
0.147078	0.052546	0.002024	0.798353
0.0	0.807819	0.185424	0.006757
0.926071	0.00519	0.008003	0.060736
0.0	0.034145	0.965855	0.0
0.016878	0.173277	0.022103	0.787743
0.043922	0.900468	0.023647	0.031963