MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Midbrain_E11.5_H3K27ac_61_134_0.523_4.716105e-18 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.921099 0.034602 0.023509 0.02079 0.107986 0.762031 0.113288 0.016694 0.944927 0.036576 0.009475 0.009022 0.625387 0.305481 0.05917 0.009962 0.798026 0.147714 0.020406 0.033853 0.209653 0.014614 0.77198 0.003753 0.059555 0.029841 0.910604 0.0 0.869667 0.03794 0.092393 0.0 0.015584 0.033253 0.951163 0.0 MOTIF Forebrain_P0_H3K27ac_74_140_0.517_4.323724e-12 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.922829 0.0 0.041602 0.035569 0.309524 0.015421 0.661517 0.013538 0.951358 0.0 0.048642 0.0 0.085335 0.845888 0.060579 0.008199 0.987031 0.005763 0.005761 0.001445 0.756691 0.151311 0.086233 0.005764 0.711899 0.008641 0.078412 0.201048 0.023089 0.310784 0.666127 0.0 0.0 0.019146 0.980854 0.0 0.214792 0.482388 0.059453 0.243367 MOTIF Hindbrain_E15.5_H3K27ac_71_143_0.519_4.27006e-23 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.910406 0.0 0.081567 0.008027 0.37281 0.022323 0.5942 0.010667 0.782859 0.00755 0.202899 0.006693 0.135332 0.836066 0.019829 0.008773 0.984274 0.0 0.015005 0.000722 0.783731 0.126087 0.089627 0.000555 0.846193 0.006601 0.014708 0.132498 0.032466 0.264367 0.703167 0.0 0.0 0.020095 0.979905 0.0 0.190987 0.515336 0.062847 0.230831 MOTIF Hindbrain_E16.5_H3K27ac_84_145_0.510_8.783446e-31 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.83206 0.0 0.095325 0.072614 0.310066 0.075131 0.598162 0.016642 0.908327 0.0 0.091673 0.0 0.015167 0.931865 0.036258 0.01671 0.945352 0.035472 0.017587 0.001589 0.797514 0.136517 0.06463 0.00134 0.775578 0.019785 0.0 0.204637 0.00691 0.206301 0.786789 0.0 0.015526 0.019579 0.964895 0.0 MOTIF Hindbrain_E11.5_H3K27ac_27_120_0.542_8.070185e-37 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.700902 0.010743 0.220007 0.068347 0.249904 0.118644 0.616822 0.01463 0.932913 0.0 0.067087 0.0 0.019685 0.906776 0.059906 0.013633 0.986231 0.0 0.007962 0.005807 0.750724 0.104446 0.144317 0.000513 0.874778 0.012941 0.015946 0.096335 0.094459 0.09481 0.807735 0.002996 0.107541 0.170344 0.722114 0.0 MOTIF Midbrain_E12.5_H3K27ac_30_117_0.543_4.844552e-70 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.356713 0.2727 0.370588 0.0 0.702591 0.015739 0.191083 0.090587 0.247846 0.112083 0.626748 0.013323 0.935223 0.0 0.064777 0.0 0.023478 0.861613 0.083244 0.031665 0.990481 0.0 0.008229 0.00129 0.817309 0.061692 0.119491 0.001508 0.964914 0.006402 0.01136 0.017323 0.015093 0.071203 0.9106 0.003103 0.108194 0.2477 0.643524 0.000581 MOTIF Hindbrain_E13.5_H3K27ac_7_152_0.560_9.11479e-172 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.37 0.001 0.463 0.166 0.509 0.295 0.195 0.001 0.997 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.783 0.001 0.001 0.215 0.001 0.001 0.997 0.001 0.1 0.454 0.446 0.001 0.207 0.452 0.233 0.107 MOTIF Forebrain_E12.5_H3K27ac_4_152_0.566_6.417795e-209 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.258 0.21 0.294 0.238 0.259 0.27 0.232 0.238 0.413 0.001 0.344 0.242 0.407 0.349 0.242 0.001 0.997 0.001 0.001 0.001 0.001 0.982 0.016 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.339 0.001 0.659 0.001 0.222 0.2 0.577 0.001 0.344 0.356 0.299 0.001 MOTIF Midbrain_E16.5_H3K27ac_16_152_0.559_1.184264e-125 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.213 0.232 0.362 0.192 0.334 0.236 0.246 0.183 0.383 0.112 0.267 0.238 0.408 0.346 0.245 0.001 0.997 0.001 0.001 0.001 0.001 0.936 0.062 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.931 0.001 0.001 0.067 0.064 0.001 0.934 0.001 0.254 0.295 0.45 0.001 0.334 0.445 0.22 0.001 MOTIF Neural-Tube_E11.5_H3K27ac_4_150_0.581_1.77374e-141 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.25 0.257 0.268 0.226 0.274 0.262 0.251 0.213 0.363 0.08 0.317 0.239 0.389 0.297 0.314 0.001 0.997 0.001 0.001 0.001 0.001 0.804 0.194 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.789 0.001 0.022 0.188 0.285 0.001 0.713 0.001 0.224 0.193 0.582 0.001 0.342 0.384 0.273 0.001 MOTIF Neural-Tube_E12.5_H3K27ac_5_150_0.582_4.715909e-110 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.27 0.265 0.314 0.152 0.275 0.235 0.246 0.244 0.314 0.153 0.279 0.253 0.347 0.311 0.303 0.039 0.82 0.055 0.066 0.059 0.066 0.775 0.082 0.077 0.852 0.05 0.049 0.049 0.871 0.009 0.072 0.048 0.707 0.04 0.051 0.202 0.183 0.05 0.697 0.07 0.274 0.276 0.416 0.034 0.294 0.371 0.3 0.035 MOTIF Hindbrain_E12.5_H3K27ac_27_145_0.542_1.650946e-62 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.146673 0.043979 0.802931 0.006416 0.940866 0.0 0.059134 0.0 0.013038 0.85163 0.121693 0.01364 1.0 0.0 0.0 0.0 0.948854 0.009738 0.041408 0.0 0.836368 0.029048 0.0 0.134584 0.028592 0.230654 0.740754 0.0 0.0 0.30179 0.69821 0.0 0.824729 0.060219 0.099093 0.015959 MOTIF Cranio-Facial_E11.5_H3K27ac_73_136_0.516_3.603013e-10 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.0 0.810926 0.136936 0.052139 0.00304 0.89034 0.092749 0.01387 0.03673 0.017217 0.019407 0.926646 0.002705 0.095774 0.068389 0.833132 0.0 0.014014 0.0 0.985986 0.048059 0.096834 0.847271 0.007837 0.0 0.0 0.0 1.0 0.009202 0.46011 0.207815 0.322872 0.05403 0.87734 0.017069 0.051561 0.195903 0.414623 0.078824 0.31065 MOTIF Neural-Tube_E11.5_H3K27ac_44_117_0.533_4.647591e-24 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.707455 0.188428 0.104117 0.003772 0.866427 0.04885 0.080951 0.116904 0.039528 0.019377 0.82419 0.000737 0.119246 0.15007 0.729946 0.004291 0.003559 0.0 0.99215 0.02039 0.07844 0.888953 0.012217 0.013259 0.012049 0.0 0.974692 0.026941 0.60876 0.121612 0.242687 0.053514 0.730805 0.018849 0.196832 MOTIF Midbrain_E11.5_H3K27ac_41_89_0.540_1.867484e-34 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.001304 0.839553 0.14099 0.018153 0.019836 0.910865 0.012863 0.056436 0.123408 0.005655 0.004752 0.866185 0.001628 0.112339 0.036545 0.849488 0.001284 0.008793 0.0 0.989924 0.030361 0.11083 0.855017 0.003791 0.005646 0.005216 0.0 0.989139 0.04112 0.556433 0.180277 0.22217 0.081514 0.709285 0.011451 0.19775 0.062834 0.340757 0.163109 0.4333 MOTIF Neural-Tube_E12.5_H3K27ac_38_98_0.543_5.496332e-28 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.0 0.726619 0.215955 0.057426 0.0 0.935398 0.014194 0.050408 0.091004 0.025629 0.002966 0.880401 0.003919 0.062741 0.096849 0.836491 0.004442 0.019398 0.003879 0.972281 0.007732 0.071597 0.914428 0.006243 0.000565 0.019739 0.0 0.979695 0.042156 0.501009 0.187896 0.268939 0.110314 0.629515 0.010811 0.24936 0.022992 0.435682 0.238934 0.302392 0.015475 0.441157 0.435367 0.108001