MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Limb_E13.5_H3K4me2_55_76_0.567_4.65572e-256
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.033439	0.858591	0.09107	0.0169
0.005488	0.032353	0.873127	0.089032
0.063039	0.860387	0.041255	0.035319
0.035167	0.061825	0.038582	0.864426
0.013183	0.504219	0.065511	0.417088
0.0	0.986306	0.004002	0.009692
0.045596	0.072128	0.01805	0.864226
0.0	0.979888	0.010292	0.00982
0.113115	0.456177	0.162644	0.268064

MOTIF	Neural-Tube_E15.5_H3K4me2_56_68_0.564_1.631984e-202
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.01493	0.075067	0.910003	0.0
0.855931	0.008822	0.052573	0.082674
0.00596	0.032457	0.949337	0.012247
0.285221	0.086097	0.622562	0.006121
0.733283	0.029356	0.053911	0.183451
0.182612	0.05761	0.759779	0.0
0.0	0.890099	0.103262	0.006639
0.027627	0.149755	0.822618	0.0
0.012135	0.889934	0.055388	0.042543

MOTIF	Liver_P0_H3K4me2_51_46_0.553_4.83962e-196
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.028768	0.570752	0.159281	0.241199
0.086449	0.802512	0.063415	0.047624
0.032445	0.042955	0.863224	0.061376
0.154928	0.763666	0.070874	0.010532
0.080959	0.02033	0.039475	0.859236
0.0	0.52573	0.320619	0.153651
0.0	0.875347	0.010521	0.114132
0.040074	0.02514	0.087934	0.846852
0.0	0.977178	0.014298	0.008524
0.147963	0.79184	0.0	0.060197

MOTIF	Kidney_E14.5_H3K4me2_34_67_0.624_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.026085	0.894003	0.074261	0.005651
0.011782	0.0	0.945663	0.042555
0.092734	0.797498	0.022512	0.087255
0.02568	0.077927	0.098084	0.798309
0.0	0.907419	0.043749	0.048831
0.0	0.607695	0.009748	0.382557
0.035101	0.035161	0.127698	0.802041
0.0	0.946876	0.044593	0.008531
0.011194	0.783363	0.032298	0.173145

MOTIF	Midbrain_E15.5_H3K4me2_47_42_0.593_6.673438e-280
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.875641	0.11668	0.007678
0.035582	0.06798	0.843122	0.053315
0.0	0.829579	0.091129	0.079292
0.026819	0.029862	0.060105	0.883214
0.004509	0.708357	0.083299	0.203835
0.003253	0.740943	0.051474	0.20433
0.131125	0.064018	0.090409	0.714447
0.0	0.925904	0.033394	0.040702
0.018173	0.883645	0.023819	0.074363
0.013566	0.054192	0.375199	0.557042

MOTIF	Stomach_E15.5_H3K4me2_45_42_0.586_5.01526e-320
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.026826	0.896692	0.0668	0.009682
0.011958	0.052176	0.881646	0.05422
0.099561	0.690701	0.06105	0.148687
0.029769	0.053834	0.105315	0.811082
0.0	0.686421	0.050313	0.263266
0.025712	0.842634	0.109163	0.022491
0.182791	0.036296	0.050497	0.730416
0.002428	0.932661	0.054355	0.010556
0.00277	0.849213	0.021081	0.126936
0.339515	0.110484	0.211423	0.338579

MOTIF	Hindbrain_P0_H3K4me3_73_102_0.558_2.622387e-98
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.100801	0.856405	0.0	0.042794
0.163908	0.080199	0.710438	0.045454
0.012755	0.0	0.987245	0.0
0.960717	0.022779	0.0	0.016504
0.07706	0.004381	0.918559	0.0
0.215133	0.049087	0.73578	0.0
0.868781	0.014964	0.046813	0.069442
0.257355	0.267378	0.461811	0.013457
0.09812	0.832197	0.0	0.069683

MOTIF	Hindbrain_E16.5_H3K4me3_65_92_0.587_1.26037e-205
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.905846	0.071053	0.023101
0.200075	0.084978	0.688465	0.026482
0.0122	0.21388	0.77392	0.0
0.775142	0.021701	0.056229	0.146928
0.158836	0.0	0.840689	0.000475
0.072149	0.066296	0.762009	0.099546
0.747785	0.078724	0.031783	0.141708
0.006712	0.028724	0.964564	0.0
0.023914	0.855234	0.050539	0.070312

MOTIF	Lung_P0_H3K4me3_53_102_0.607_1.265144e-212
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.87223	0.0907	0.03707
0.008611	0.033574	0.881542	0.076272
0.019753	0.047609	0.932009	0.000628
0.639389	0.014846	0.028554	0.317211
0.0	0.003916	0.994988	0.001097
0.319169	0.091762	0.583819	0.00525
0.85772	0.040828	0.067455	0.033997
0.027449	0.15143	0.811615	0.009505
0.113993	0.687469	0.045439	0.153099

MOTIF	Intestine_E15.5_H3K4me3_37_38_0.646_1.733897e-316
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0181	0.880967	0.100309	0.000624
0.011973	0.0	0.959865	0.028162
0.068166	0.78986	0.035843	0.106131
0.056078	0.010184	0.041698	0.89204
0.000529	0.894649	0.047134	0.057688
0.016374	0.895276	0.060859	0.027491
0.056287	0.174182	0.097902	0.671628
0.001474	0.885959	0.019275	0.093292
0.0	0.53757	0.207001	0.255429

MOTIF	Forebrain_P0_H3K4me3_73_69_0.570_1.910436e-132
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.024163	0.741522	0.171967	0.062347
0.026543	0.098464	0.762175	0.112819
0.044618	0.877672	0.025447	0.052263
0.076407	0.057644	0.062902	0.803048
0.000184	0.690261	0.078074	0.231481
0.004902	0.835579	0.022752	0.136767
0.110091	0.054749	0.026836	0.808324
0.0	0.963881	0.019497	0.016622
0.069148	0.715858	0.031277	0.183717

MOTIF	Limb_E12.5_H3K4me3_29_36_0.645_1.040107e-319
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.012362	0.899721	0.085147	0.002769
0.017184	0.028061	0.912272	0.042484
0.035949	0.861751	0.038296	0.064003
0.022282	0.069172	0.092048	0.816498
0.0	0.643678	0.073693	0.282629
0.002078	0.872094	0.007036	0.118791
0.125474	0.082834	0.047513	0.744179
0.019702	0.947123	0.024261	0.008913
0.072002	0.594428	0.123863	0.209707
0.263701	0.333655	0.248452	0.154192

MOTIF	Midbrain_E15.5_H3K4me3_52_47_0.620_1.268862e-311
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.009605	0.923039	0.040928	0.026429
0.004105	0.009157	0.71116	0.275578
0.01665	0.846603	0.038234	0.098513
0.186846	0.034679	0.056173	0.722302
0.001264	0.881213	0.073381	0.044142
0.007554	0.838504	0.145238	0.008704
0.039242	0.04387	0.132208	0.78468
0.0	0.825477	0.160053	0.01447
0.006626	0.849786	0.01703	0.126558
0.276866	0.178392	0.476713	0.06803

MOTIF	Midbrain_P0_H3K4me3_52_69_0.618_1.163188e-282
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.015339	0.984661	0.0
0.735023	0.017244	0.085418	0.162314
0.035147	0.007236	0.895827	0.06179
0.158563	0.014167	0.821694	0.005575
0.722322	0.085111	0.044654	0.147912
0.052171	0.097236	0.751734	0.098859
0.089998	0.780505	0.104793	0.024703
0.009769	0.023636	0.957993	0.008601
0.117899	0.723031	0.061473	0.097596

MOTIF	Lung_E14.5_H3K9ac_60_95_0.548_1.501355e-53
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.058579	0.829071	0.090134	0.022216
0.316719	0.017502	0.660223	0.005556
0.0	0.021753	0.978247	0.0
0.987759	0.0	0.0	0.012241
0.038209	0.064887	0.888652	0.008251
0.27363	0.0	0.72637	0.0
0.844051	0.062941	0.062026	0.030982
0.238945	0.038816	0.722239	0.0
0.239867	0.704591	0.047402	0.00814

MOTIF	Midbrain_E14.5_H3K9ac_37_38_0.581_3.765196e-295
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.03308	0.904093	0.054996	0.007831
0.023984	0.03541	0.87644	0.064166
0.014574	0.94578	0.025302	0.014344
0.120793	0.076562	0.076666	0.725979
0.015122	0.603947	0.054961	0.325969
0.00291	0.993596	0.003494	0.0
0.174809	0.043539	0.088976	0.692677
0.022834	0.908459	0.059838	0.008869
0.025181	0.568438	0.153155	0.253226