MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Hindbrain_E12.5_H3K4me1_38_45_0.525_1.117848e-78
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.862105	0.073311	0.064583	0.0
0.0	0.024303	0.975697	0.0
0.035665	0.94723	0.0	0.017104
0.065521	0.813506	0.047558	0.073415
0.042377	0.034793	0.023558	0.899272
0.031773	0.870764	0.033841	0.063621
0.0	0.464431	0.04347	0.492099
0.088083	0.185569	0.673048	0.0533
0.01184	0.862701	0.091539	0.03392
0.909201	0.008594	0.032783	0.049422
0.062627	0.02437	0.851594	0.061408

MOTIF	Liver_E12.5_H3K4me3_78_73_0.536_4.76678e-74
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.343622	0.539619	0.0	0.116759
0.012667	0.957644	0.029689	0.0
0.062334	0.087479	0.048263	0.801924
0.008165	0.056793	0.918212	0.01683
0.029571	0.913497	0.055005	0.001926
0.047372	0.030935	0.740843	0.18085
0.0	0.077296	0.9005	0.022204
0.830519	0.01566	0.0	0.15382
0.021098	0.019861	0.889164	0.069876

MOTIF	Liver_P0_H3K4me3_51_80_0.575_8.32842e-244
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.110687	0.522645	0.019866	0.346802
0.045655	0.954345	0.0	0.0
0.235	0.06725	0.0	0.697749
0.00926	0.901957	0.082576	0.006206
0.00676	0.863564	0.092329	0.037347
0.028099	0.046009	0.885432	0.04046
0.0	0.790227	0.176386	0.033387
0.832942	0.046559	0.009421	0.111078
0.0	0.032443	0.967557	0.0

MOTIF	Kidney_P0_H3K4me3_77_70_0.538_1.46455e-31
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.114765	0.221925	0.463154	0.200156
0.015819	0.948201	0.03598	0.0
0.168221	0.078412	0.029296	0.724072
0.09001	0.082093	0.825799	0.002098
0.029392	0.85411	0.017182	0.099316
0.455745	0.0	0.441266	0.102988
0.002902	0.012377	0.983199	0.001522
0.822663	0.026943	0.086681	0.063713
0.012703	0.036294	0.943637	0.007367
0.062606	0.891658	0.023939	0.021796

MOTIF	Limb_E13.5_H3K4me3_76_52_0.585_2.226543e-179
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.001151	0.958111	0.034255	0.006483
0.189083	0.09441	0.043282	0.673225
0.064205	0.060199	0.869288	0.006309
0.024161	0.856057	0.024228	0.095554
0.301843	0.002821	0.666888	0.028448
0.002425	0.113582	0.881874	0.002119
0.826681	0.055553	0.0188	0.098965
0.008823	0.02626	0.956014	0.008903
0.2399	0.643199	0.058801	0.058099
0.050402	0.386984	0.493438	0.069176

MOTIF	Hindbrain_E13.5_H3K4me3_79_69_0.554_2.252844e-119
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.127453	0.723253	0.073416	0.075877
0.023649	0.720889	0.200522	0.05494
0.054277	0.017108	0.0	0.928615
0.0	0.808328	0.184741	0.006931
0.007968	0.540772	0.037724	0.413536
0.014913	0.059789	0.904534	0.020765
0.0	0.928547	0.071453	0.0
0.759253	0.068718	0.094841	0.077187
0.007928	0.016903	0.965783	0.009386

MOTIF	Cranio-Facial_E14.5_H3K4me3_84_77_0.556_2.348177e-96
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.003214	0.815716	0.042073	0.138997
0.054815	0.100723	0.046189	0.798274
0.001653	0.957434	0.035926	0.004987
0.096495	0.63628	0.00997	0.257255
0.019481	0.098469	0.700337	0.181713
0.057605	0.8149	0.068974	0.058521
0.805384	0.047398	0.116667	0.030551
0.001649	0.039655	0.958311	0.000385
0.145121	0.732607	0.012239	0.110033

MOTIF	Forebrain_E16.5_H3K4me3_73_66_0.553_1.035523e-90
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.916506	0.015487	0.068008
0.095049	0.031545	0.008159	0.865247
0.004991	0.921889	0.060605	0.012516
0.017408	0.629855	0.017826	0.334912
0.02581	0.054496	0.89988	0.019814
0.036902	0.833411	0.05162	0.078066
0.72814	0.046072	0.02765	0.198138
0.008511	0.029147	0.962342	0.0
0.031498	0.801606	0.137321	0.029575

MOTIF	Lung_E14.5_H3K4me3_73_55_0.576_1.378157e-204
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.001558	0.916806	0.033998	0.047639
0.027883	0.095086	0.019027	0.858003
0.000734	0.947244	0.044033	0.007989
0.016146	0.695925	0.016254	0.271674
0.023285	0.059096	0.842741	0.074878
0.022616	0.834514	0.076213	0.066657
0.769013	0.07145	0.02297	0.136567
0.005847	0.03894	0.955213	0.0
0.02359	0.593733	0.145361	0.237316
0.146666	0.423238	0.421412	0.008684

MOTIF	Midbrain_P0_H3K4me3_69_51_0.573_2.572581e-156
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.025388	0.216122	0.660185	0.098305
0.117354	0.082499	0.673665	0.126483
0.008314	0.956441	0.035245	0.0
0.079006	0.043171	0.059089	0.818734
0.035534	0.046043	0.912861	0.005562
0.026983	0.857473	0.09117	0.024374
0.317814	0.025895	0.59475	0.061542
0.002065	0.081931	0.915176	0.000828
0.786725	0.037655	0.029482	0.146138

MOTIF	Hindbrain_E16.5_H3K4me3_59_36_0.599_5.688164e-212
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.881508	0.041402	0.07709
0.027093	0.074672	0.071822	0.826413
0.004339	0.764348	0.231313	0.0
0.067893	0.716122	0.009315	0.20667
0.104854	0.041793	0.816857	0.036497
0.010589	0.832913	0.100936	0.055562
0.844472	0.053159	0.043937	0.058431
0.0	0.056319	0.93927	0.004411
0.128892	0.6316	0.223401	0.016106
0.04517	0.0	0.701304	0.253526

MOTIF	Midbrain_E12.5_H3K4me3_68_57_0.584_2.257472e-143
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.000989	0.922801	0.042114	0.034097
0.039819	0.134477	0.032517	0.793188
0.004122	0.899033	0.045657	0.051188
0.014699	0.724767	0.009404	0.25113
0.138338	0.080944	0.761499	0.019219
0.029542	0.854508	0.053621	0.062329
0.831316	0.088187	0.030257	0.05024
0.001285	0.046068	0.950563	0.002085
0.122532	0.540701	0.307924	0.028843
0.172329	0.0	0.771854	0.055817

MOTIF	Limb_E12.5_H3K4me3_73_45_0.570_1.667792e-149
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.005549	0.897422	0.034409	0.06262
0.143161	0.072315	0.049748	0.734775
0.004309	0.940543	0.045919	0.009229
0.012207	0.802413	0.013299	0.172081
0.130521	0.077502	0.778025	0.013951
0.016086	0.915892	0.044313	0.02371
0.784599	0.055718	0.04631	0.113372
0.004048	0.039363	0.956589	0.0
0.135014	0.458056	0.191075	0.215855
0.460368	0.0	0.495098	0.044534

MOTIF	Heart_E11.5_H3K4me3_68_41_0.568_5.568359e-175
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.016956	0.863417	0.048398	0.071229
0.049643	0.095698	0.051871	0.802788
0.002186	0.842673	0.155141	0.0
0.0776	0.716642	0.017627	0.188131
0.079968	0.085302	0.817751	0.016979
0.017652	0.909979	0.051591	0.020778
0.80605	0.060788	0.035454	0.097708
0.003631	0.046239	0.949418	0.000712
0.140239	0.541388	0.187423	0.130949

MOTIF	Intestine_P0_H3K4me3_78_52_0.559_7.149308e-77
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.005647	0.876011	0.041934	0.076407
0.065473	0.064348	0.059619	0.810559
0.022142	0.923506	0.051857	0.002495
0.009209	0.705399	0.010832	0.27456
0.097819	0.08453	0.796445	0.021206
0.001358	0.897958	0.060267	0.040417
0.837785	0.085821	0.053082	0.023312
0.0	0.042998	0.949289	0.007714
0.149247	0.486531	0.240893	0.123329

MOTIF	Neural-Tube_E15.5_H3K4me3_74_55_0.554_3.724311e-89
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.00666	0.90224	0.028405	0.062696
0.046287	0.105841	0.071488	0.776384
0.000505	0.961425	0.038071	0.0
0.008791	0.7011	0.009856	0.280253
0.087366	0.095633	0.700532	0.116469
0.058673	0.8358	0.062989	0.042538
0.835332	0.0488	0.061608	0.054259
0.0	0.032084	0.964199	0.003717
0.094997	0.63947	0.13764	0.127894