MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Hindbrain_E16.5_H3K4me1_64_67_0.517_2.700765e-36
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.0	1.0	0.0
0.009565	0.963606	0.026829	0.0
0.234386	0.619019	0.11693	0.029665
0.0479	0.21009	0.021805	0.720204
0.0	0.0	0.979723	0.020277
0.0	0.968873	0.0	0.031127
0.062259	0.464565	0.447156	0.02602
0.0	0.945553	0.034128	0.02032
0.854407	0.0	0.044942	0.100651

MOTIF	Forebrain_E13.5_H3K4me1_66_100_0.510_3.111136e-24
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.042898	0.014231	0.931885	0.010985
0.010428	0.021377	0.59153	0.376665
0.119173	0.0	0.872894	0.007933
0.074573	0.776369	0.139112	0.009946
0.888048	0.039459	0.018262	0.054231
0.0	0.167275	0.823846	0.00888
0.019698	0.16755	0.783267	0.029486
0.004263	0.927534	0.032698	0.035505
0.789875	0.073347	0.136778	0.0

MOTIF	Heart_E13.5_H3K4me1_60_53_0.511_1.438704e-20
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.369783	0.034303	0.246375	0.34954
0.028472	0.191124	0.713862	0.066542
0.088735	0.227907	0.56707	0.116289
0.009072	0.073651	0.890552	0.026726
0.017212	0.949414	0.024114	0.00926
0.950883	0.034376	0.014741	0.0
0.015754	0.233098	0.685516	0.065633
0.010675	0.158951	0.825729	0.004645
0.0	0.966395	0.017667	0.015938
0.801977	0.03526	0.148873	0.013891

MOTIF	Limb_E13.5_H3K4me1_107_68_0.504_6.042779e-06
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.01989	0.005699	0.941541	0.03287
0.073765	0.065998	0.852368	0.007869
0.056733	0.019769	0.893624	0.029874
0.15423	0.781159	0.036717	0.027895
0.727746	0.011279	0.222917	0.038058
0.034523	0.221037	0.709561	0.034879
0.022717	0.172146	0.791828	0.013309
0.013183	0.86639	0.072873	0.047554
0.933406	0.03998	0.00444	0.022174
0.0	0.514913	0.0	0.485087

MOTIF	Liver_E13.5_H3K4me3_61_70_0.547_8.853021e-88
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.151612	0.687888	0.007364	0.153135
0.028755	0.909598	0.037348	0.024299
0.043187	0.392926	0.199198	0.364688
0.039207	0.0	0.865864	0.094929
0.0	0.9587	0.037004	0.004296
0.019664	0.849516	0.093742	0.037077
0.0	0.943702	0.055436	0.000862
0.825483	0.051778	0.024713	0.098026
0.0	0.028687	0.971313	0.0

MOTIF	Forebrain_E16.5_H3K4me3_72_52_0.554_1.037988e-69
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.076891	0.867034	0.028599	0.027477
0.152005	0.650901	0.051569	0.145525
0.097813	0.760413	0.018697	0.123077
0.221326	0.035777	0.687003	0.055894
0.0	0.934318	0.053971	0.011711
0.148608	0.723089	0.099651	0.028652
0.001515	0.93273	0.060628	0.005127
0.834763	0.032918	0.046336	0.085984
0.001731	0.03303	0.95652	0.008719
0.116786	0.614973	0.027819	0.240421
0.239183	0.0	0.480694	0.280123

MOTIF	Intestine_P0_H3K4me3_80_63_0.550_1.479419e-74
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.091557	0.81239	0.066749	0.029304
0.192429	0.717123	0.074389	0.016059
0.027254	0.723464	0.024755	0.224528
0.289177	0.017912	0.639966	0.052944
0.0	0.939837	0.057078	0.003085
0.172989	0.697541	0.103532	0.025938
0.0	0.931057	0.065161	0.003782
0.854487	0.028215	0.093143	0.024156
0.0	0.023123	0.96553	0.011346
0.211635	0.395917	0.130165	0.262283

MOTIF	Limb_E14.5_H3K4me3_84_50_0.555_3.772811e-78
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.051327	0.885327	0.044983	0.018363
0.135406	0.800733	0.036158	0.027703
0.030656	0.702552	0.067906	0.198886
0.217144	0.044246	0.660271	0.078339
0.001822	0.92366	0.065629	0.008889
0.148403	0.598162	0.136332	0.117104
0.0	0.946375	0.051628	0.001997
0.864545	0.014287	0.065725	0.055443
0.0	0.015488	0.979374	0.005138
0.204408	0.488419	0.225996	0.081176
0.214845	0.1983	0.352201	0.234655

MOTIF	Liver_E14.5_H3K4me3_59_42_0.578_2.897828e-170
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.091273	0.81145	0.031066	0.066211
0.022028	0.799453	0.07259	0.105929
0.163219	0.022477	0.734364	0.079941
0.002886	0.960156	0.023596	0.013362
0.044569	0.729109	0.085081	0.14124
0.004738	0.8469	0.143635	0.004727
0.860521	0.03995	0.012714	0.086815
0.003917	0.031527	0.916682	0.047874
0.076659	0.771708	0.126349	0.025284

MOTIF	Heart_P0_H3K4me2_70_34_0.546_6.236313e-230
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.057604	0.793497	0.113658	0.03524
0.029367	0.74699	0.174817	0.048826
0.071044	0.668938	0.094955	0.165062
0.125577	0.022872	0.784003	0.067548
0.005871	0.841381	0.133838	0.01891
0.089013	0.731806	0.133452	0.045729
0.007127	0.867631	0.119215	0.006027
0.873737	0.020617	0.029495	0.076151
0.0	0.023196	0.973602	0.003201

MOTIF	Intestine_E14.5_H3K4me2_76_54_0.539_7.516397e-96
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.070299	0.84926	0.054883	0.025559
0.034003	0.765939	0.064516	0.135542
0.043126	0.598362	0.114295	0.244217
0.107045	0.004096	0.788369	0.100491
0.0	0.928127	0.064069	0.007804
0.152794	0.755604	0.057676	0.033926
0.0	0.833322	0.166678	0.0
0.893019	0.025543	0.047085	0.034353
0.0	0.018289	0.981711	0.0

MOTIF	Limb_E12.5_H3K4me2_95_76_0.509_2.735029e-12
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.032139	0.886456	0.044126	0.037279
0.020197	0.917317	0.062486	0.0
0.038635	0.494281	0.010296	0.456788
0.050603	0.050547	0.82742	0.07143
0.0	0.952163	0.042861	0.004976
0.422534	0.447243	0.092038	0.038185
0.0	0.937565	0.0616	0.000835
0.920773	0.0	0.023773	0.055453
0.0	0.035824	0.95953	0.004646
0.355839	0.062974	0.50451	0.076677

MOTIF	Hindbrain_E16.5_H3K9ac_75_68_0.530_2.661527e-27
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.018436	0.950505	0.0	0.031058
0.315102	0.642705	0.007825	0.034368
0.342074	0.042554	0.561047	0.054325
0.0	0.922363	0.074814	0.002822
0.066635	0.807908	0.069051	0.056405
0.015331	0.928003	0.050139	0.006528
0.874961	0.0	0.01532	0.109719
0.0	0.036466	0.866261	0.097273
0.209092	0.755961	0.022694	0.012253
0.021956	0.0	0.422397	0.555647

MOTIF	Intestine_E16.5_H3K9ac_71_52_0.522_7.753442e-22
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.009388	0.0	0.08256	0.908052
0.047699	0.845675	0.032172	0.074454
0.043433	0.890198	0.02346	0.04291
0.06547	0.562978	0.149604	0.221948
0.05259	0.021557	0.634567	0.291286
0.000723	0.913644	0.076217	0.009416
0.13892	0.74028	0.047225	0.073576
0.004836	0.834812	0.145104	0.015248
0.890755	0.0	0.060322	0.048923
0.0	0.027351	0.972649	0.0

MOTIF	Cranio-Facial_E14.5_H3K9ac_78_58_0.538_2.596907e-100
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.100751	0.83503	0.021302	0.042916
0.022499	0.731461	0.071296	0.174744
0.060182	0.703793	0.032445	0.20358
0.229361	0.003576	0.684626	0.082436
0.0	0.964895	0.031983	0.003123
0.183712	0.699671	0.078741	0.037876
0.0	0.9559	0.04287	0.001231
0.884493	0.037195	0.012054	0.066259
0.0	0.054638	0.934854	0.010508
0.055664	0.65788	0.167131	0.119325

MOTIF	Stomach_E16.5_H3K9ac_97_95_0.507_2.214751e-11
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.119901	0.812951	0.020119	0.047029
0.019424	0.923064	0.045619	0.011893
0.062435	0.428195	0.0	0.50937
0.223937	0.073402	0.613558	0.089103
0.0	0.956987	0.036507	0.006506
0.202806	0.692792	0.074611	0.02979
0.0	0.966754	0.029072	0.004174
0.87173	0.0	0.056531	0.071738
0.0	0.045585	0.954415	0.0