MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Midbrain_E16.5_H3K27ac_25_27_0.552_7.698971e-169
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.020346	0.697234	0.28242	0.0
0.803996	0.060035	0.114687	0.021282
0.0	0.0	0.988331	0.011669
0.031518	0.968482	0.0	0.0
0.040773	0.0	0.924764	0.034463
0.040912	0.893878	0.04974	0.01547
0.0	0.562941	0.278	0.159059
0.027362	0.907147	0.024782	0.040709
0.057938	0.683506	0.016007	0.242549

MOTIF	Midbrain_P0_H3K27ac_21_18_0.558_6.07646e-129
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.941185	0.0	0.0	0.058815
0.054725	0.797933	0.147342	0.0
0.877016	0.0	0.046946	0.076038
0.006373	0.036244	0.933117	0.024266
0.039035	0.913681	0.041543	0.005741
0.050743	0.020838	0.894644	0.033776
0.02747	0.908715	0.029874	0.033941
0.010381	0.2179	0.749136	0.022583
0.016141	0.856054	0.064735	0.063069

MOTIF	Neural-Tube_E12.5_H3K27ac_20_24_0.563_3.336019e-43
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.780911	0.0	0.0	0.219089
0.040113	0.90511	0.049144	0.005633
0.836817	0.038654	0.054705	0.069825
0.013701	0.013603	0.835239	0.137456
0.064316	0.913376	0.0	0.022307
0.008772	0.059191	0.92724	0.004797
0.209052	0.757175	0.0	0.033773
0.027386	0.013484	0.937124	0.022006
0.020816	0.648795	0.07154	0.258849

MOTIF	Forebrain_E15.5_H3K27me3_10_13_0.537_1.127834e-48
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.10164	0.737938	0.076535	0.083888
0.775321	0.018095	0.078498	0.128087
0.024243	0.052147	0.85704	0.06657
0.246474	0.699523	0.043737	0.010266
0.006989	0.02265	0.948467	0.021895
0.176038	0.6898	0.016098	0.118064
0.031329	0.040314	0.902267	0.02609
0.133494	0.769525	0.0496	0.047381
0.048851	0.835053	0.021651	0.094445
0.140103	0.394031	0.367434	0.098432

MOTIF	Limb_E12.5_H3K4me2_37_23_0.595_1.942816e-309
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.036663	0.899673	0.005871	0.057793
0.886308	0.0	0.05533	0.058362
0.016381	0.03456	0.840259	0.1088
0.129636	0.799555	0.050223	0.020586
0.031246	0.033855	0.923158	0.01174
0.165136	0.807243	0.0	0.027621
0.141096	0.038908	0.773465	0.046531
0.00847	0.913354	0.033456	0.04472
0.221957	0.591643	0.0	0.1864
0.288606	0.421157	0.031989	0.258247

MOTIF	Liver_E12.5_H3K4me2_8_8_0.621_0
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.253167	0.674179	0.049913	0.02274
0.034687	0.065329	0.887309	0.012675
0.039978	0.042094	0.859101	0.058827
0.019292	0.077089	0.764577	0.139042
0.021435	0.914306	0.036293	0.027966
0.021229	0.040091	0.910288	0.028392
0.164181	0.73989	0.018469	0.077461
0.073503	0.037706	0.66998	0.218811
0.103895	0.77463	0.032276	0.089199
0.008403	0.25464	0.070957	0.666
0.15332	0.152832	0.675778	0.01807

MOTIF	Limb_E14.5_H3K4me2_25_11_0.633_6.447351e-314
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.039789	0.826313	0.0	0.133898
0.193164	0.064231	0.706155	0.03645
0.052571	0.0	0.898598	0.048831
0.097866	0.081163	0.757625	0.063347
0.133636	0.798085	0.048037	0.020242
0.081354	0.040478	0.771375	0.106794
0.127562	0.752348	0.054679	0.065411
0.10594	0.045037	0.728146	0.120876
0.010143	0.94199	0.03795	0.009916
0.522729	0.022997	0.0	0.454274

MOTIF	Liver_E14.5_H3K4me2_8_7_0.623_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.08965	0.763317	0.062945	0.084088
0.034653	0.059333	0.893092	0.012922
0.207343	0.062261	0.682615	0.047781
0.030903	0.072376	0.850985	0.045737
0.2239	0.718794	0.026976	0.03033
0.015474	0.018053	0.94907	0.017403
0.130272	0.790057	0.017536	0.062135
0.079953	0.072724	0.709975	0.137347
0.064323	0.86134	0.049912	0.024425
0.302728	0.456951	0.0	0.24032

MOTIF	Hindbrain_E11.5_H3K4me2_14_6_0.685_7.463554e-311
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.356538	0.412935	0.070066	0.160461
0.021168	0.946791	0.017331	0.01471
0.180279	0.030488	0.768236	0.020997
0.059359	0.032805	0.860356	0.047479
0.104341	0.036197	0.777736	0.081726
0.037498	0.805577	0.134486	0.02244
0.029067	0.14983	0.797805	0.023297
0.198663	0.70643	0.03461	0.060297
0.109571	0.045871	0.775129	0.069428
0.042607	0.913778	0.028314	0.0153
0.439516	0.134595	0.301803	0.124086

MOTIF	Intestine_E15.5_H3K4me2_3_8_0.657_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.058648	0.899995	0.003507	0.03785
0.049844	0.091985	0.806098	0.052073
0.069231	0.0	0.8647	0.066069
0.126742	0.068561	0.746128	0.05857
0.142984	0.746319	0.034193	0.076503
0.038162	0.023597	0.824403	0.113839
0.132399	0.740039	0.044816	0.082747
0.114773	0.068832	0.715023	0.101373
0.012907	0.92513	0.024701	0.037262
0.160485	0.027964	0.314247	0.497303

MOTIF	Neural-Tube_E14.5_H3K4me2_9_7_0.684_7.147213e-314
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.054562	0.909731	0.0	0.035707
0.062367	0.022085	0.888147	0.027402
0.036463	0.081332	0.830427	0.051779
0.083182	0.040996	0.862916	0.012905
0.06762	0.896296	0.006179	0.029904
0.142717	0.052047	0.560375	0.244862
0.188734	0.709971	0.033877	0.067418
0.121219	0.03636	0.73904	0.103381
0.006782	0.921418	0.052868	0.018932
0.186578	0.314172	0.245731	0.25352
0.0	0.037609	0.720409	0.241982

MOTIF	Lung_E15.5_H3K27me3_4_22_0.561_1.032135e-85
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.161546	0.694252	0.066538	0.077665
0.789634	0.04899	0.078007	0.083369
0.019197	0.030672	0.937404	0.012728
0.007409	0.949546	0.043045	0.0
0.019329	0.0	0.980671	0.0
0.022274	0.85631	0.066575	0.054841
0.044687	0.0	0.924272	0.031041
0.183544	0.383006	0.040985	0.392465
0.047301	0.696429	0.029289	0.226982

MOTIF	Heart_E13.5_H3K4me3_40_33_0.635_1.9565e-320
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.962372	0.037628	0.0
0.82906	0.004219	0.092766	0.073955
0.070516	0.028495	0.878543	0.022446
0.060826	0.86271	0.059462	0.017002
0.153283	0.014207	0.685497	0.147013
0.149191	0.760364	0.030257	0.060189
0.112289	0.050165	0.809535	0.02801
0.12036	0.828777	0.033892	0.016971
0.223883	0.714154	0.036136	0.025827
0.086082	0.296359	0.570632	0.046927

MOTIF	Forebrain_E13.5_H3K4me3_44_45_0.651_2.410277e-317
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.02182	0.935991	0.037878	0.004311
0.882523	0.019833	0.065196	0.032448
0.008775	0.052335	0.857324	0.081566
0.247025	0.667062	0.048085	0.037828
0.145213	0.007461	0.837622	0.009704
0.179981	0.785216	0.014076	0.020727
0.018502	0.007868	0.94144	0.03219
0.044754	0.730786	0.013072	0.211388
0.06216	0.833607	0.094636	0.009597

MOTIF	Heart_E16.5_H3K4me3_25_54_0.642_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.147843	0.789633	0.044859	0.017665
0.905154	0.012259	0.082588	0.0
0.095802	0.070922	0.81808	0.015195
0.170101	0.815511	0.0	0.014388
0.17455	0.011355	0.806953	0.007142
0.04639	0.93089	0.016293	0.006427
0.019803	0.015243	0.895257	0.069697
0.014681	0.592011	0.084342	0.308967
0.027387	0.931064	0.0	0.041549

MOTIF	Midbrain_E16.5_H3K9ac_10_24_0.625_3.141518e-316
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.096316	0.367962	0.497682	0.038041
0.873163	0.009576	0.069737	0.047524
0.159739	0.064336	0.770529	0.005395
0.009372	0.951406	0.015421	0.0238
0.014602	0.0	0.985398	0.0
0.021001	0.945765	0.015111	0.018123
0.029743	0.106179	0.825422	0.038656
0.198198	0.461246	0.082428	0.258129
0.219777	0.67683	0.071459	0.031934
0.047411	0.861914	0.024481	0.066194