MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Liver_E13.5_H3K4me2_31_22_0.574_9.743963e-320
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.0	0.0	1.0
0.0	0.772444	0.015773	0.211783
0.018765	0.124285	0.85695	0.0
0.0	0.709467	0.078107	0.212426
0.0	0.816348	0.156826	0.026825
0.008764	0.169617	0.82162	0.0
0.0	0.0	0.988945	0.011055
0.0	1.0	0.0	0.0
0.004573	0.042738	0.0	0.952689

MOTIF	Hindbrain_E13.5_H3K4me3_76_36_0.568_2.886307e-130
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.733052	0.266948	0.0	0.0
0.0	1.0	0.0	0.0
0.807303	0.093878	0.041549	0.057271
0.0	0.075	0.918317	0.006683
0.209008	0.617192	0.078681	0.09512
0.0	0.935354	0.049013	0.015633
0.098215	0.058445	0.810098	0.033241
0.0	0.0	0.738831	0.261169
0.0	0.937699	0.027729	0.034573

MOTIF	Limb_E13.5_H3K4me3_51_166_0.619_9.596237e-259
letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1
0.101	0.739	0.083	0.077
0.083	0.106	0.727	0.084
0.05	0.803	0.092	0.055
0.093	0.706	0.092	0.109
0.092	0.079	0.741	0.088
0.051	0.092	0.796	0.061
0.052	0.833	0.068	0.047
0.082	0.057	0.061	0.8
0.031	0.092	0.786	0.091
0.091	0.141	0.116	0.652
0.671	0.113	0.129	0.087
0.745	0.085	0.102	0.068

MOTIF	Cranio-Facial_E12.5_H3K4me3_53_70_0.632_5.463518e-315
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.979584	0.020416	0.0
0.957538	0.021105	0.0	0.021357
0.0	0.035714	0.942336	0.02195
0.058313	0.590801	0.042768	0.308119
0.009657	0.699744	0.026967	0.263632
0.014443	0.120451	0.706054	0.159052
0.0	0.013855	0.885676	0.100469
0.0	0.917734	0.039498	0.042768
0.042665	0.0	0.91246	0.044875

MOTIF	Forebrain_E11.5_H3K4me3_35_69_0.676_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.368687	0.032554	0.571032	0.027727
0.0	0.814245	0.185755	0.0
0.765113	0.035266	0.142875	0.056745
0.006144	0.116544	0.871058	0.006254
0.168845	0.65563	0.060347	0.115178
0.016462	0.586676	0.163565	0.233298
0.085972	0.163025	0.58593	0.165073
0.007933	0.13306	0.843314	0.015694
0.032513	0.893902	0.053825	0.019761
0.044209	0.0	0.662447	0.293344

MOTIF	Liver_E16.5_H3K4me3_22_32_0.646_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.062076	0.766115	0.149211	0.022598
0.961058	0.024288	0.0	0.014654
0.0	0.065224	0.934776	0.0
0.260726	0.340421	0.249537	0.149316
0.005343	0.848315	0.025413	0.120929
0.044589	0.095527	0.844666	0.015217
0.00821	0.020845	0.950492	0.020454
0.034471	0.856584	0.0	0.108945
0.007693	0.0	0.984238	0.008069

MOTIF	Limb_E12.5_H3K4me2_20_36_0.623_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.008723	0.991277	0.0	0.0
0.038976	0.095511	0.814252	0.051261
0.121827	0.619705	0.060589	0.197879
0.010938	0.916913	0.058508	0.013641
0.032583	0.0	0.915796	0.051621
0.236434	0.018917	0.551373	0.193275
0.016069	0.951117	0.032813	0.0
0.096142	0.054766	0.068435	0.780657
0.0	0.966906	0.033094	0.0

MOTIF	Liver_E14.5_H3K4me2_32_34_0.592_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.246818	0.0	0.753182	0.0
0.946178	0.0	0.0	0.053822
0.0	0.024235	0.975765	0.0
0.041698	0.720029	0.021188	0.217086
0.02146	0.918632	0.059908	0.0
0.082836	0.160499	0.756665	0.0
0.095009	0.0	0.894245	0.010746
0.020616	0.760077	0.022257	0.19705
0.0	0.025456	0.974544	0.0

MOTIF	Midbrain_E14.5_H3K4me2_9_45_0.666_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.932626	0.067374	0.0	0.0
0.0	0.042113	0.882119	0.075769
0.022113	0.754015	0.071371	0.152502
0.017464	0.864777	0.11776	0.0
0.0	0.034009	0.946634	0.019357
0.0	0.039705	0.868607	0.091687
0.078526	0.863192	0.0	0.058282
0.0	0.0	0.990929	0.009071
0.458598	0.358631	0.060076	0.122695

MOTIF	Heart_E14.5_H3K4me2_54_28_0.554_1.144653e-192
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.0	0.233935	0.180672	0.585393
0.029118	0.930269	0.022704	0.017909
0.092606	0.743347	0.019057	0.144989
0.013433	0.86626	0.07435	0.045958
0.335497	0.0	0.611377	0.053126
0.108829	0.789484	0.083431	0.018256
0.025286	0.824927	0.050775	0.099012
0.055899	0.020456	0.891052	0.032592
0.027647	0.005676	0.930674	0.036003
0.011097	0.837545	0.048167	0.10319
0.0	0.0	0.0	1.0

MOTIF	Cranio-Facial_E14.5_H3K4me2_24_21_0.623_0
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.06054	0.93946	0.0	0.0
0.062632	0.0	0.906705	0.030664
0.009155	0.946218	0.029778	0.014848
0.086775	0.754778	0.069093	0.089354
0.062316	0.020104	0.885643	0.031938
0.0	0.0	0.972615	0.027385
0.004598	0.954014	0.028871	0.012517
0.0	0.0	0.074028	0.925972

MOTIF	Liver_E12.5_H3K4me2_29_50_0.574_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.889792	0.110208	0.0	0.0
0.0	0.045275	0.954725	0.0
0.024654	0.879635	0.068288	0.027422
0.0	0.837741	0.054279	0.10798
0.028228	0.04221	0.752312	0.17725
0.0	0.0	1.0	0.0
0.0	0.743179	0.041143	0.215678
0.0	0.015007	0.984993	0.0
0.203941	0.0	0.626363	0.169696

MOTIF	Neural-Tube_E12.5_H3K4me2_22_30_0.624_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.051715	0.55462	0.314866	0.078799
0.06833	0.93167	0.0	0.0
0.034837	0.05948	0.824137	0.081546
0.074085	0.762038	0.056676	0.107201
0.022818	0.885572	0.056019	0.035592
0.21839	0.045986	0.676786	0.058838
0.007554	0.010573	0.843327	0.138546
0.04855	0.894211	0.05128	0.00596
0.140103	0.0	0.020181	0.839716

MOTIF	Midbrain_E16.5_H3K9ac_67_46_0.558_1.463315e-153
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.128434	0.0	0.0	0.871566
0.397848	0.602152	0.0	0.0
0.05152	0.128923	0.765974	0.053582
0.013272	0.773078	0.047517	0.166132
0.067598	0.858863	0.0	0.07354
0.072914	0.026039	0.883461	0.017585
0.125206	0.023117	0.657161	0.194516
0.005646	0.823347	0.061406	0.1096
0.030306	0.016397	0.059086	0.894211
0.027171	0.813951	0.020664	0.138213

MOTIF	Neural-Tube_E14.5_H3K9ac_37_72_0.606_2.855991e-294
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.0	0.323024	0.676976	0.0
0.436928	0.563072	0.0	0.0
0.0	1.0	0.0	0.0
0.466227	0.03337	0.44895	0.051453
0.0	0.022241	0.977759	0.0
0.088692	0.829049	0.0	0.082259
0.0	0.0	0.996981	0.003019
0.76839	0.055264	0.047674	0.128672

MOTIF	Stomach_E16.5_H3K9ac_24_42_0.586_5.975375e-311
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.958591	0.0	0.0	0.041409
0.0	0.049491	0.950509	0.0
0.329568	0.636133	0.0	0.034299
0.026014	0.859155	0.077236	0.037595
0.023429	0.084083	0.856458	0.03603
0.00995	0.026548	0.952301	0.011201
0.03072	0.906371	0.0	0.062908
0.0	0.023438	0.976562	0.0
0.407408	0.019224	0.419862	0.153507