MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Hindbrain_E12.5_H3K9me3_35_163_0.528_4.354846e-35
letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1
0.112	0.827	0.025	0.036
0.053	0.057	0.016	0.874
0.001	0.001	0.997	0.001
0.057	0.173	0.001	0.769
0.113	0.708	0.001	0.178
0.017	0.043	0.045	0.895
0.227	0.343	0.053	0.377
0.575	0.086	0.001	0.338
0.001	0.06	0.864	0.075
0.008	0.001	0.572	0.419
0.294	0.092	0.129	0.484
0.162	0.372	0.07	0.396

MOTIF	Cranio-Facial_E12.5_H3K9me3_82_102_0.510_1.545562e-07
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.311796	0.0	0.532815	0.155389
0.056516	0.870788	0.062228	0.010468
0.097405	0.893402	0.0	0.009193
0.016462	0.073246	0.001288	0.909003
0.504819	0.01677	0.478411	0.0
0.880264	0.000664	0.036329	0.082743
0.093546	0.049273	0.81777	0.039412
0.973599	0.013692	0.012709	0.0
0.041991	0.910009	0.0	0.048
0.957747	0.042253	0.0	0.0

MOTIF	Forebrain_E13.5_H3K9me3_79_94_0.517_3.674355e-24
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.271719	0.670721	0.042351	0.015209
0.08923	0.90651	0.0	0.00426
0.083026	0.051891	0.00327	0.861812
0.563543	0.052524	0.383933	0.0
0.933611	0.002545	0.059037	0.004808
0.059313	0.035677	0.883075	0.021935
0.911884	0.033266	0.048204	0.006645
0.036695	0.944732	0.0	0.018573
0.933628	0.0	0.0	0.066372

MOTIF	Kidney_E15.5_H3K9me3_33_76_0.521_6.558469e-15
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.406805	0.077691	0.041285	0.474218
0.1732	0.711129	0.064648	0.051023
0.074313	0.898611	0.012066	0.01501
0.334573	0.037083	0.014899	0.613444
0.704385	0.067067	0.206657	0.021891
0.967727	0.002522	0.009724	0.020026
0.0	0.047254	0.94564	0.007106
0.945805	0.007219	0.038834	0.008142
0.07802	0.899858	0.0	0.022122
0.931736	0.020279	0.0	0.047985

MOTIF	Midbrain_E13.5_H3K9me3_75_92_0.518_5.545089e-17
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.220987	0.742225	0.028139	0.008648
0.106851	0.87541	0.001887	0.015851
0.263795	0.014993	0.006537	0.714675
0.606523	0.071263	0.313803	0.008411
0.919705	0.001133	0.056267	0.022896
0.034485	0.050477	0.894422	0.020615
0.894758	0.040991	0.055905	0.008345
0.083963	0.90687	0.0	0.009167
0.971336	0.028664	0.0	0.0

MOTIF	Heart_E11.5_H3K9me3_58_120_0.518_1.116021e-16
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.694033	0.223392	0.067371	0.015204
0.032502	0.957182	0.010316	0.0
0.045063	0.217025	0.004386	0.733526
0.686609	0.274258	0.039133	0.0
0.941886	0.007262	0.007429	0.043423
0.004737	0.023847	0.894858	0.076558
0.802582	0.007823	0.189596	0.0
0.0	0.984779	0.008954	0.006267
0.987871	0.0	0.012129	0.0

MOTIF	Heart_E13.5_H3K9me3_63_40_0.526_1.17128e-86
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.751165	0.207524	0.037919	0.003393
0.008498	0.98885	0.00021	0.002443
0.054897	0.277516	0.016998	0.650589
0.769162	0.18584	0.044998	0.0
0.977985	0.001913	0.019586	0.000515
0.0	0.003343	0.993135	0.003521
0.850872	0.008823	0.138726	0.00158
0.0	0.905269	0.028814	0.065918
0.976961	0.0	0.023039	0.0

MOTIF	Liver_P0_H3K9me3_72_53_0.514_9.997093e-11
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.612794	0.227389	0.064214	0.095603
0.609695	0.308782	0.064631	0.016891
0.045263	0.884842	0.004308	0.065587
0.017991	0.027992	0.02929	0.924727
0.755708	0.019946	0.224346	0.0
0.842763	0.014353	0.0	0.142883
0.0	0.0	1.0	0.0
0.932396	0.0167	0.019987	0.030917
0.001127	0.992508	0.0	0.006365
0.991279	0.0	0.008721	0.0

MOTIF	Cranio-Facial_E15.5_H3K9me3_98_115_0.501_1.721419e-06
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.079082	0.725336	0.18295	0.012632
0.022578	0.021547	0.029487	0.926389
0.801669	0.098139	0.09131	0.008881
0.805005	0.011929	0.173457	0.009609
0.016589	0.046146	0.923137	0.014128
0.907847	0.062271	0.0	0.029882
0.068304	0.905231	0.02109	0.005374
0.765725	0.002755	0.00609	0.22543
0.028128	0.208844	0.750498	0.012531
0.687075	0.197312	0.071154	0.04446

MOTIF	Kidney_E16.5_H3K9me3_115_122_0.500_3.376927e-18
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.505276	0.202624	0.275962	0.016138
0.104139	0.792871	0.023069	0.07992
0.02412	0.075863	0.178647	0.72137
0.737481	0.182629	0.063236	0.016654
0.811651	0.028797	0.046423	0.113129
0.024637	0.12168	0.802794	0.050889
0.964858	0.011817	0.014655	0.008669
0.037774	0.93056	0.025682	0.005983
0.983979	0.012754	0.001929	0.001339
0.018796	0.102159	0.8756	0.003445

MOTIF	Limb_E13.5_H3K9me3_111_40_0.508_1.098063e-38
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.459527	0.358517	0.145479	0.036476
0.110889	0.805267	0.051411	0.032432
0.027482	0.107489	0.212014	0.653015
0.888128	0.014365	0.087948	0.009559
0.862872	0.025666	0.099057	0.012405
0.048799	0.055208	0.893936	0.002057
0.919682	0.039835	0.002338	0.038145
0.029338	0.966175	0.00096	0.003526
0.98224	0.008979	0.001781	0.007
0.019006	0.131668	0.837047	0.012279

MOTIF	Intestine_E14.5_H3K9me3_100_148_0.507_9.427746e-06
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.210126	0.700339	0.010373	0.079162
0.355546	0.097024	0.0538	0.49363
0.876847	0.037224	0.052876	0.033052
0.965301	0.005977	0.010469	0.018252
0.048064	0.010658	0.941277	0.0
0.755997	0.032268	0.198187	0.013548
0.018363	0.972302	0.004019	0.005316
0.949068	0.001127	0.022848	0.026957
0.055887	0.161289	0.752916	0.029908

MOTIF	Limb_E14.5_H3K9me3_89_148_0.507_3.88538e-06
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.163888	0.731159	0.005105	0.099848
0.373993	0.116647	0.07066	0.438701
0.860796	0.097689	0.004857	0.036658
0.981655	0.004576	0.001299	0.012469
0.048367	0.08324	0.842784	0.025609
0.810112	0.031861	0.147899	0.010128
0.030219	0.950092	0.007672	0.012017
0.955443	0.010828	0.002389	0.03134
0.027189	0.08917	0.845743	0.037898

MOTIF	Intestine_P0_H3K9me3_85_102_0.507_5.213277e-06
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.002347	0.974765	0.017833	0.005054
0.238136	0.048377	0.127252	0.586235
0.729767	0.05935	0.190454	0.020429
0.796107	0.005264	0.197011	0.001618
0.044278	0.005614	0.941393	0.008715
0.7247	0.137748	0.12719	0.010361
0.005063	0.983087	0.003792	0.008057
0.945982	0.0	0.007478	0.04654
0.033897	0.065216	0.875262	0.025625

MOTIF	Kidney_E15.5_H3K9me3_92_61_0.507_9.57792e-17
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.037302	0.859893	0.073116	0.029689
0.273431	0.129681	0.057135	0.539753
0.722296	0.08737	0.18332	0.007014
0.848978	0.035925	0.076817	0.03828
0.013784	0.095082	0.884287	0.006847
0.771142	0.075787	0.149587	0.003484
0.012937	0.976116	0.00545	0.005497
0.983589	0.004351	0.005194	0.006866
0.0	0.068828	0.912083	0.01909

MOTIF	Liver_E15.5_H3K9me3_51_130_0.503_0.01495696
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.063962	0.894797	0.009119	0.032122
0.162592	0.207484	0.04225	0.587674
0.602784	0.281643	0.109715	0.005857
0.954241	0.017788	0.007426	0.020545
0.006064	0.091454	0.875479	0.027004
0.832368	0.011631	0.104031	0.05197
0.026958	0.958312	0.0	0.01473
0.970367	0.004523	0.019396	0.005714
0.023921	0.051325	0.924754	0.0

MOTIF	Stomach_E14.5_H3K9me3_72_94_0.506_0.00106641
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.166005	0.789124	0.009105	0.035767
0.128021	0.026693	0.09355	0.751737
0.731377	0.101447	0.145508	0.021668
0.826215	0.034884	0.068756	0.070145
0.04771	0.112653	0.826287	0.013351
0.785331	0.066118	0.106925	0.041626
0.039293	0.894905	0.005765	0.060038
0.938637	0.023912	0.02877	0.008681
0.032146	0.112062	0.829961	0.025831
0.073309	0.519993	0.355914	0.050784