MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Heart_E12.5_H3K9me3_51_56_0.532_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.690708 0.054619 0.047846 0.206827 0.043654 0.920767 0.035579 0.0 0.050121 0.008535 0.014846 0.926498 0.007155 0.92869 0.001749 0.062406 0.055385 0.032281 0.000741 0.911593 0.0 0.919042 0.019427 0.061531 0.873917 0.000367 0.054626 0.07109 0.021868 0.358016 0.617421 0.002695 0.0 0.661864 0.338136 0.0 MOTIF Heart_E13.5_H3K9me3_84_74_0.521_1.020663e-86 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.744687 0.050213 0.020374 0.184726 0.01044 0.861833 0.114671 0.013055 0.011267 0.081612 0.007444 0.899677 0.005453 0.951467 0.005768 0.037312 0.058078 0.040408 0.004705 0.89681 0.000813 0.88635 0.031525 0.081313 0.685981 0.003912 0.023904 0.286203 0.035942 0.183503 0.778086 0.002469 0.01479 0.739669 0.202162 0.043379 MOTIF Forebrain_E12.5_H3K9me3_95_20_0.509_1.047576e-45 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.531462 0.012769 0.022998 0.432771 0.0 0.984937 0.007427 0.007636 0.013487 0.046516 0.010361 0.929636 0.001605 0.978897 0.001725 0.017773 0.0 0.146976 0.018274 0.83475 0.173987 0.742845 0.066398 0.01677 0.874307 0.0 0.078974 0.046719 0.0 0.757985 0.210858 0.031157 0.019787 0.748437 0.231776 0.0 MOTIF Forebrain_E13.5_H3K9me3_82_6_0.516_5.770626e-75 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.777034 0.048135 0.069257 0.105574 0.00131 0.981777 0.005426 0.011486 0.009763 0.016039 0.007931 0.966268 0.003897 0.985475 0.007956 0.002672 0.052903 0.046467 0.024055 0.876576 0.208067 0.618938 0.056672 0.116323 0.873149 0.022634 0.04813 0.056088 0.019804 0.566405 0.41329 0.000501 0.019495 0.759175 0.168173 0.053157 MOTIF Hindbrain_E15.5_H3K9me3_122_62_0.504_1.647024e-17 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.87725 0.02053 0.029429 0.072791 0.0 0.977472 0.0 0.022528 0.002623 0.06241 0.0 0.934967 0.026058 0.921262 0.023203 0.029477 0.012252 0.074061 0.001088 0.912599 0.315228 0.396028 0.21685 0.071894 0.911815 0.0 0.012405 0.07578 0.0 0.902747 0.090114 0.007139 0.019016 0.925815 0.004339 0.05083 0.158317 0.367891 0.0 0.473793 MOTIF Cranio-Facial_E13.5_H3K9me3_101_97_0.506_1.677774e-48 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.783493 0.095448 0.042937 0.078122 0.053394 0.931382 0.015224 0.0 0.003085 0.064458 0.085819 0.846638 0.0 0.986484 0.01319 0.000326 0.053555 0.004835 0.003553 0.938057 0.002983 0.654729 0.093584 0.248703 0.756911 0.018499 0.013752 0.210838 0.020295 0.673619 0.255343 0.050743 0.035948 0.94001 0.008146 0.015897 MOTIF Forebrain_E15.5_H3K9me3_116_103_0.501_1.478919e-16 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.752635 0.11136 0.054945 0.08106 0.0 0.948176 0.024484 0.027341 0.07527 0.009541 0.010263 0.904927 0.014211 0.886167 0.084696 0.014926 0.035906 0.067445 0.025604 0.871045 0.055222 0.739931 0.174111 0.030736 0.969467 0.005438 0.013342 0.011754 0.02437 0.60265 0.37298 0.0 0.221059 0.748327 0.00193 0.028684 MOTIF Liver_E12.5_H3K9me3_77_48_0.503_5.299016e-63 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.929535 0.007254 0.021977 0.041235 0.015457 0.977212 0.00733 0.0 0.033081 0.021954 0.076318 0.868647 0.00822 0.963806 0.020449 0.007525 0.033032 0.063163 0.032217 0.871587 0.032302 0.894754 0.034568 0.038376 0.687774 0.017352 0.161295 0.133578 0.0 0.703156 0.296844 0.0 0.213765 0.767296 0.002966 0.015974 MOTIF Hindbrain_E13.5_H3K9me3_127_163_0.501_7.137636e-21 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.565 0.001 0.433 0.001 0.001 0.621 0.001 0.377 0.997 0.001 0.001 0.001 0.001 0.745 0.001 0.253 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.73 0.001 0.268 0.983 0.001 0.015 0.001 0.001 0.997 0.001 0.001 0.001 0.888 0.016 0.095 0.001 0.001 0.001 0.997 MOTIF Midbrain_E15.5_H3K9me3_105_173_0.504_6.756125e-11 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.862 0.001 0.001 0.136 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.033 0.001 0.965 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.997 MOTIF Forebrain_E12.5_H3K9me3_113_158_0.504_1.090882e-19 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.98 0.001 0.018 0.001 0.025 0.001 0.973 0.001 0.037 0.001 0.961 0.001 0.001 0.01 0.001 0.988 0.083 0.001 0.915 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.994 0.004 0.997 0.001 0.001 0.001 0.061 0.001 0.937 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.997 MOTIF Limb_E13.5_H3K9me3_120_170_0.502_4.593557e-21 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.997 0.001 0.001 0.001 0.016 0.942 0.001 0.041 0.997 0.001 0.001 0.001 0.011 0.948 0.001 0.04 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.957 0.001 0.041 0.995 0.001 0.003 0.001 0.034 0.964 0.001 0.001 0.001 0.997 0.001 0.001 0.019 0.001 0.001 0.979 MOTIF Liver_E12.5_H3K9me3_83_164_0.501_3.616946e-23 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.904 0.001 0.094 0.001 0.001 0.973 0.001 0.025 0.997 0.001 0.001 0.001 0.001 0.989 0.009 0.001 0.001 0.001 0.001 0.997 0.001 0.963 0.001 0.035 0.001 0.001 0.001 0.997 0.001 0.976 0.001 0.022 0.989 0.001 0.009 0.001 0.018 0.949 0.001 0.032 0.001 0.997 0.001 0.001 0.013 0.001 0.001 0.985 MOTIF Heart_E12.5_H3K9me3_125_157_0.510_3.972997e-171 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.956 0.001 0.042 0.994 0.001 0.004 0.001 0.007 0.991 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.949 0.001 0.049 0.997 0.001 0.001 0.001 0.001 0.968 0.001 0.03 0.001 0.973 0.001 0.025 0.001 0.001 0.001 0.997 0.055 0.001 0.943 0.001 MOTIF Limb_E12.5_H3K9me3_132_170_0.502_5.491863e-25 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.92 0.001 0.078 0.997 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.009 0.989 0.003 0.995 0.001 0.001 0.001 0.009 0.001 0.989 0.001 0.964 0.001 0.034 0.986 0.001 0.012 0.001 0.001 0.952 0.001 0.046 0.001 0.945 0.001 0.053 0.001 0.001 0.001 0.997 0.039 0.001 0.959 0.001 MOTIF Forebrain_E13.5_H3K9me3_115_156_0.504_3.802937e-35 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.036 0.874 0.001 0.089 0.997 0.001 0.001 0.001 0.001 0.972 0.001 0.026 0.001 0.001 0.001 0.997 0.005 0.993 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.955 0.001 0.043 0.988 0.001 0.01 0.001 0.001 0.951 0.001 0.047 0.001 0.98 0.001 0.018 0.001 0.01 0.001 0.988 0.078 0.001 0.92 0.001 MOTIF Midbrain_E13.5_H3K9me3_114_159_0.502_2.007996e-15 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.962 0.001 0.036 0.997 0.001 0.001 0.001 0.034 0.005 0.96 0.001 0.034 0.001 0.964 0.001 0.001 0.011 0.001 0.987 0.086 0.001 0.912 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.028 0.001 0.97 0.001 0.001 0.011 0.001 0.987 0.062 0.001 0.879 0.058 MOTIF Neural-Tube_E12.5_H3K9me3_104_160_0.506_2.017334e-30 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.907 0.001 0.091 0.996 0.001 0.002 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.968 0.001 0.03 0.001 0.001 0.001 0.997 0.001 0.925 0.001 0.073 0.997 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.996 0.002 0.001 0.001 0.011 0.001 0.987 0.092 0.001 0.906 0.001