MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Intestine_P0_H3K4me3_40_60_0.638_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.373738 0.448416 0.037839 0.140007 0.048655 0.007882 0.943463 0.0 0.582186 0.027566 0.104722 0.285526 0.011285 0.207731 0.750022 0.030962 0.025875 0.871238 0.0 0.102888 0.020008 0.016032 0.930809 0.033151 0.0 0.959583 0.036199 0.004218 0.859321 0.031129 0.0 0.10955 0.0 0.029499 0.970501 0.0 MOTIF Kidney_P0_H3K4me3_71_64_0.571_1.537667e-102 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.019165 0.93151 0.0 0.049325 0.115893 0.875898 0.008209 0.0 0.302603 0.0 0.055071 0.642325 0.0 0.055821 0.919744 0.024435 0.012789 0.958089 0.021422 0.0077 0.066623 0.038142 0.849226 0.046009 0.01305 0.736535 0.164318 0.086097 0.05921 0.082157 0.0 0.858634 0.0 0.92597 0.051872 0.022158 0.053217 0.045688 0.288982 0.612114 0.0 0.530269 0.45004 0.019691 MOTIF Hindbrain_P0_H3K4me3_44_47_0.635_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.02376 0.784137 0.061719 0.130384 0.004902 0.182545 0.812553 0.0 0.725501 0.04542 0.099991 0.129088 0.0 0.181333 0.749305 0.069362 0.039415 0.678996 0.0 0.281589 0.025763 0.07358 0.870105 0.030552 0.004768 0.967163 0.024039 0.00403 0.880597 0.033235 0.042634 0.043533 0.0 0.145647 0.80234 0.052013 MOTIF Cranio-Facial_E15.5_H3K4me3_56_58_0.604_1.783197e-313 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.066445 0.72761 0.051927 0.154017 0.0 0.103697 0.887133 0.00917 0.792573 0.091135 0.062855 0.053438 0.015912 0.024203 0.952433 0.007452 0.158166 0.662529 0.040573 0.138732 0.158433 0.120633 0.720934 0.0 0.011706 0.774272 0.214022 0.0 0.850558 0.03301 0.010826 0.105606 0.0 0.027507 0.957767 0.014727 MOTIF Midbrain_E12.5_H3K4me3_60_54_0.595_8.013616e-209 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.014702 0.059135 0.926162 0.0 0.014935 0.689123 0.079651 0.216291 0.009035 0.035425 0.95554 0.0 0.716889 0.012789 0.046252 0.22407 0.013984 0.165882 0.820134 0.0 0.025358 0.793003 0.026768 0.15487 0.204579 0.112422 0.661836 0.021163 0.010185 0.925617 0.064197 0.0 0.820173 0.024575 0.025427 0.129825 0.014367 0.01716 0.968473 0.0 MOTIF Limb_E12.5_H3K4me3_34_71_0.636_1.061235e-316 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.211433 0.04047 0.738821 0.009276 0.827814 0.021484 0.068708 0.081993 0.158828 0.032768 0.792432 0.015973 0.069448 0.90618 0.0 0.024371 0.02363 0.004555 0.958497 0.013319 0.016583 0.972486 0.010931 0.0 0.740576 0.048759 0.015833 0.194831 0.0 0.054476 0.873197 0.072327 0.228668 0.467899 0.284379 0.019054 MOTIF Intestine_P0_H3K4me3_68_62_0.577_2.303493e-140 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.058117 0.038583 0.9033 0.0 0.71508 0.024068 0.075347 0.185506 0.13889 0.037359 0.812601 0.01115 0.147925 0.788656 0.041949 0.02147 0.15007 0.047515 0.773729 0.028686 0.004289 0.939228 0.056076 0.000407 0.823747 0.070679 0.058777 0.046797 0.0 0.021116 0.938711 0.040173 0.194488 0.747677 0.020515 0.037321 0.090598 0.03612 0.278439 0.594843 MOTIF Kidney_E15.5_H3K4me3_54_44_0.614_1.474489e-305 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.120141 0.007998 0.867683 0.004179 0.7946 0.054945 0.052265 0.098189 0.112593 0.02217 0.746376 0.118861 0.123893 0.844885 0.019123 0.0121 0.033611 0.042163 0.762287 0.16194 0.0 0.96441 0.03559 0.0 0.677644 0.074519 0.115995 0.131842 0.0 0.016366 0.95408 0.029553 0.119706 0.719786 0.013457 0.14705 0.276798 0.058847 0.450973 0.213381 MOTIF Limb_E13.5_H3K4me3_53_60_0.618_1.738555e-316 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.172383 0.031601 0.796015 0.0 0.863388 0.024065 0.069944 0.042603 0.257862 0.014676 0.636124 0.091338 0.081515 0.864851 0.039528 0.014107 0.027813 0.026449 0.902377 0.043361 0.0 0.958961 0.041039 0.0 0.740771 0.041747 0.140769 0.076713 0.0 0.015324 0.955936 0.02874 0.312065 0.499307 0.010564 0.178063 MOTIF Midbrain_E13.5_H3K4me3_68_60_0.586_5.938454e-143 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.150229 0.042561 0.804198 0.003012 0.80633 0.037933 0.073566 0.082171 0.082849 0.026391 0.844159 0.0466 0.358691 0.573922 0.046505 0.020882 0.079849 0.04773 0.859702 0.012719 0.016243 0.930845 0.052912 0.0 0.707958 0.084166 0.066227 0.141649 0.0 0.007999 0.91272 0.079282 0.030845 0.894934 0.029939 0.044282 0.124883 0.584229 0.201517 0.089371 MOTIF Hindbrain_E14.5_H3K4me3_72_55_0.562_2.471185e-120 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.09947 0.2773 0.622844 0.000387 0.759983 0.060632 0.053007 0.126378 0.079959 0.043805 0.844164 0.032071 0.085496 0.761692 0.058801 0.09401 0.125191 0.088734 0.68416 0.101915 0.009458 0.944276 0.045753 0.000513 0.86122 0.020931 0.058058 0.059791 0.0 0.016886 0.953231 0.029883 0.073387 0.814764 0.027489 0.084361 MOTIF Stomach_E16.5_H3K4me3_50_34_0.609_6.195583e-321 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.119459 0.203814 0.670725 0.006001 0.647599 0.101148 0.078239 0.173014 0.098097 0.026891 0.843211 0.031802 0.033747 0.899145 0.051116 0.015992 0.109989 0.025138 0.706014 0.158858 0.001463 0.94356 0.054976 0.0 0.81691 0.059704 0.050866 0.07252 0.0 0.023854 0.961897 0.014248 0.167283 0.688903 0.041083 0.102731 0.107311 0.409078 0.329077 0.154534 MOTIF Midbrain_E12.5_H3K4me2_57_47_0.577_3.006954e-261 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.0 0.34753 0.65247 0.0 0.13869 0.565122 0.0 0.296189 0.0 0.051371 0.940398 0.008231 0.86047 0.0 0.045848 0.093681 0.013571 0.033738 0.781544 0.171147 0.165427 0.834573 0.0 0.0 0.116018 0.0 0.861228 0.022754 0.0 0.93914 0.06086 0.0 0.746663 0.017511 0.094138 0.141689 0.0 0.0 0.961477 0.038523 MOTIF Hindbrain_E12.5_H3K4me2_84_37_0.532_2.093312e-100 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.0 0.0 0.0 1.0 0.007188 0.716932 0.08912 0.186759 0.017056 0.938928 0.044016 0.0 0.132069 0.033899 0.007119 0.826913 0.0 0.011656 0.988344 0.0 0.029016 0.936639 0.0 0.034345 0.018044 0.066579 0.861324 0.054054 0.010713 0.815757 0.025505 0.148025 0.253525 0.427873 0.022946 0.295656 0.0 0.899643 0.063755 0.036602 MOTIF Hindbrain_E14.5_H3K4me2_87_110_0.515_7.632522e-94 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.045271 0.901698 0.0 0.053032 0.031334 0.9485 0.020166 0.0 0.049907 0.01907 0.0 0.931023 0.0 0.029978 0.970022 0.0 0.249191 0.700135 0.024491 0.026183 0.043963 0.040689 0.851201 0.064147 0.012635 0.660237 0.018944 0.308184 0.333248 0.074333 0.052542 0.539877 0.012693 0.879562 0.085807 0.021938 MOTIF Kidney_P0_H3K4me2_44_55_0.585_3.425109e-315 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.009969 0.879573 0.017841 0.092617 0.015123 0.052052 0.932825 0.0 0.662462 0.093375 0.028451 0.215712 0.009844 0.038693 0.851625 0.099838 0.155209 0.584446 0.072829 0.187516 0.032685 0.075353 0.875631 0.016331 0.006287 0.929246 0.059879 0.004588 0.849981 0.01164 0.011855 0.126524 0.015449 0.004708 0.921515 0.058328 MOTIF Midbrain_E15.5_H3K4me2_83_90_0.536_5.004318e-208 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.155188 0.606594 0.012917 0.225302 0.0 0.9443 0.0557 0.0 0.100311 0.072759 0.031555 0.795376 0.0 0.034983 0.965017 0.0 0.030644 0.938157 0.0 0.031199 0.25236 0.040069 0.62611 0.081461 0.0 0.893678 0.03675 0.069572 0.219721 0.080562 0.01052 0.689196 0.0 0.958004 0.041996 0.0 MOTIF Midbrain_E16.5_H3K9ac_100_91_0.516_2.898845e-26 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.169268 0.751556 0.042367 0.036809 0.02468 0.922775 0.052546 0.0 0.04261 0.031984 0.008652 0.916754 0.002226 0.045805 0.951968 0.0 0.017382 0.68296 0.060468 0.23919 0.048511 0.04539 0.850067 0.056032 0.008147 0.739564 0.031024 0.221264 0.309797 0.04837 0.021091 0.620742 0.002842 0.844381 0.107624 0.045153