MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Midbrain_P0_H3K27me3_27_49_0.523_4.96317e-21
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.02884	0.206745	0.764416	0.0
0.015164	0.955473	0.0	0.029363
0.020255	0.051807	0.84672	0.081219
0.026392	0.973608	0.0	0.0
0.882749	0.056252	0.060998	0.0
0.004654	0.063544	0.924538	0.007264
0.037058	0.0	0.944108	0.018834
0.344957	0.0	0.26574	0.389303
0.785165	0.121768	0.039967	0.0531

MOTIF	Forebrain_P0_H3K27me3_13_26_0.533_6.553921e-35
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.488283	0.331226	0.0	0.180492
0.015662	0.904742	0.01304	0.066556
0.045638	0.846912	0.02053	0.08692
0.0	0.0	0.14405	0.85595
0.248287	0.049598	0.689549	0.012566
0.071681	0.873774	0.0	0.054545
0.015093	0.0	0.984907	0.0
0.0	0.883526	0.093843	0.022631
0.042865	0.04249	0.914645	0.0

MOTIF	Neural-Tube_E14.5_H3K27me3_12_22_0.550_3.217555e-34
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.264717	0.607203	0.014818	0.113262
0.094455	0.70287	0.023684	0.178991
0.007307	0.868787	0.112814	0.011092
0.058532	0.0	0.004752	0.936716
0.028561	0.04768	0.903501	0.020258
0.030767	0.83352	0.0	0.135713
0.05927	0.017169	0.916417	0.007143
0.006266	0.738169	0.21181	0.043755
0.048455	0.045761	0.853241	0.052544

MOTIF	Kidney_P0_H3K4me3_60_45_0.597_2.01634e-172
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.010091	0.906952	0.0	0.082957
0.067571	0.830504	0.0	0.101925
0.00567	0.250546	0.743784	0.0
0.023606	0.955691	0.019368	0.001335
0.241606	0.038047	0.509231	0.211116
0.002212	0.932842	0.064438	0.000508
0.8153	0.044101	0.076016	0.064583
0.0	0.020939	0.771307	0.207753
0.046768	0.060961	0.858969	0.033301
0.365084	0.111643	0.306133	0.21714
0.354247	0.042475	0.334086	0.269192

MOTIF	Kidney_E15.5_H3K4me2_50_34_0.567_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.029797	0.943843	0.011344	0.015016
0.044345	0.865635	0.054895	0.035125
0.011484	0.935154	0.053362	0.0
0.061913	0.084854	0.106742	0.746491
0.023705	0.085632	0.890663	0.0
0.060009	0.470155	0.065682	0.404153
0.007697	0.0	0.992303	0.0
0.0	0.733944	0.023387	0.242668
0.0	0.0	0.970702	0.029298

MOTIF	Kidney_P0_H3K4me2_34_53_0.597_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.216539	0.707365	0.043342	0.032755
0.016527	0.573243	0.021273	0.388956
0.015045	0.926456	0.0585	0.0
0.143743	0.012984	0.01416	0.829113
0.006897	0.099535	0.885811	0.007757
0.008474	0.981214	0.007318	0.002994
0.250401	0.054193	0.506754	0.188652
0.019265	0.893023	0.060336	0.027376
0.013582	0.0	0.939323	0.047094

MOTIF	Limb_E11.5_H3K4me2_70_46_0.553_3.280634e-183
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.126529	0.765141	0.036817	0.071514
0.031092	0.853732	0.053323	0.061852
0.0	0.952556	0.047444	0.0
0.149357	0.023751	0.028976	0.797917
0.000947	0.016957	0.979132	0.002964
0.015886	0.667471	0.153968	0.162675
0.143673	0.022383	0.695039	0.138905
0.004055	0.75227	0.230827	0.012848
0.002014	0.030733	0.712245	0.255008

MOTIF	Lung_E15.5_H3K4me2_48_49_0.583_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.025405	0.774697	0.007693	0.192204
0.017962	0.916906	0.043832	0.0213
0.05912	0.116699	0.815414	0.008766
0.033137	0.662088	0.0	0.304774
0.195018	0.059257	0.745725	0.0
0.0	0.907949	0.038351	0.0537
0.817367	0.024902	0.078964	0.078767
0.0	0.050238	0.89879	0.050972
0.031684	0.0	0.822661	0.145655

MOTIF	Neural-Tube_E14.5_H3K4me2_42_34_0.615_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.153488	0.821915	0.00973	0.014867
0.246773	0.666607	0.039359	0.047261
0.010504	0.910168	0.079328	0.0
0.102488	0.07399	0.038619	0.784902
0.096855	0.025061	0.818826	0.059257
0.003453	0.932952	0.036181	0.027415
0.199435	0.034831	0.753397	0.012337
0.0	0.670784	0.119588	0.209628
0.0	0.020782	0.955291	0.023927

MOTIF	Hindbrain_E16.5_H3K4me3_46_47_0.612_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.241508	0.737844	0.014505	0.006143
0.27999	0.646088	0.020219	0.053703
0.008054	0.971629	0.020318	0.0
0.150725	0.069941	0.051629	0.727704
0.006734	0.010778	0.978212	0.004276
0.009994	0.904399	0.055382	0.030225
0.267571	0.016158	0.70559	0.01068
0.0	0.665798	0.05796	0.276242
0.007009	0.120849	0.860961	0.011181

MOTIF	Midbrain_E14.5_H3K4me3_21_36_0.699_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.181039	0.679722	0.016354	0.122884
0.065778	0.895273	0.03238	0.006569
0.0	0.855119	0.01484	0.13004
0.628828	0.036264	0.157638	0.17727
0.031825	0.04955	0.885933	0.032692
0.047681	0.944991	0.0	0.007328
0.040908	0.0	0.859403	0.099689
0.159726	0.716333	0.0923	0.031641
0.0	0.013108	0.955918	0.030974

MOTIF	Midbrain_E12.5_H3K4me3_55_50_0.609_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.092196	0.839099	0.019351	0.049354
0.116143	0.792019	0.04682	0.045018
0.004461	0.929254	0.066285	0.0
0.87386	0.035858	0.043118	0.047164
0.008855	0.060366	0.818546	0.112233
0.138433	0.749932	0.0	0.111635
0.104818	0.032168	0.737726	0.125288
0.022917	0.667002	0.187433	0.122648
0.035485	0.061097	0.882287	0.02113

MOTIF	Neural-Tube_E12.5_H3K4me3_54_32_0.597_4.064678e-320
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.067833	0.853244	0.032131	0.046791
0.05802	0.836123	0.06699	0.038867
0.000622	0.952133	0.017422	0.029824
0.819292	0.055109	0.030137	0.095462
0.004812	0.070587	0.875615	0.048986
0.217551	0.623338	0.059183	0.099929
0.133788	0.008944	0.832904	0.024364
0.034635	0.77312	0.017038	0.175208
0.038441	0.056715	0.71836	0.186483

MOTIF	Cranio-Facial_E11.5_H3K4me3_47_36_0.633_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.113809	0.657439	0.053493	0.175259
0.178298	0.689225	0.109452	0.023025
0.005623	0.962969	0.026442	0.004966
0.885524	0.04728	0.012966	0.054231
0.001736	0.068011	0.828575	0.101679
0.017059	0.919817	0.054427	0.008698
0.105634	0.040616	0.711131	0.142618
0.011068	0.785438	0.018821	0.184672
0.019372	0.083061	0.739005	0.158562

MOTIF	Cranio-Facial_E15.5_H3K4me3_45_44_0.626_2.588722e-311
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.168809	0.620232	0.040742	0.170217
0.207844	0.724168	0.050703	0.017286
0.0	0.956914	0.03981	0.003276
0.897885	0.03686	0.021169	0.044085
0.003019	0.049644	0.815241	0.132096
0.051268	0.799975	0.033154	0.115603
0.15568	0.045412	0.635275	0.163633
0.019009	0.934286	0.025875	0.020829
0.037781	0.080205	0.817453	0.064561

MOTIF	Heart_E11.5_H3K4me3_37_25_0.627_3.365445e-317
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.064483	0.834427	0.023547	0.077543
0.166535	0.646108	0.048288	0.13907
0.0	0.915827	0.048177	0.035996
0.799895	0.03849	0.049995	0.111621
0.010658	0.047889	0.853204	0.088248
0.106047	0.828338	0.021099	0.044516
0.069839	0.0	0.80091	0.129251
0.029625	0.894806	0.035679	0.039891
0.146867	0.040646	0.722609	0.089879

MOTIF	Kidney_E16.5_H3K4me3_44_23_0.623_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.10594	0.650039	0.026846	0.217176
0.106467	0.726797	0.047464	0.119271
0.0	0.971931	0.026275	0.001794
0.784167	0.043862	0.059836	0.112135
0.007157	0.049466	0.836932	0.106444
0.042009	0.873606	0.072701	0.011683
0.109954	0.013247	0.764201	0.112597
0.008715	0.837481	0.134237	0.019567
0.02901	0.085444	0.725154	0.160391

MOTIF	Hindbrain_E15.5_H3K4me3_45_34_0.622_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.080618	0.834977	0.047267	0.037139
0.042827	0.782369	0.038196	0.136608
0.00805	0.945616	0.043728	0.002605
0.842586	0.037084	0.053517	0.066814
0.002135	0.105362	0.75725	0.135254
0.033956	0.776445	0.030968	0.15863
0.138157	0.013256	0.654104	0.194482
0.091797	0.816092	0.081739	0.010373
0.017708	0.027911	0.864343	0.090039

MOTIF	Neural-Tube_E14.5_H3K4me3_27_24_0.678_7.172731e-313
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.072952	0.723653	0.056133	0.147262
0.106545	0.747735	0.039465	0.106255
0.000569	0.92376	0.072411	0.00326
0.800302	0.025232	0.020574	0.153893
0.001781	0.106302	0.805344	0.086572
0.050685	0.866773	0.029691	0.052851
0.09156	0.036032	0.779337	0.093072
0.102671	0.75968	0.03145	0.106199
0.012111	0.0598	0.864233	0.063856