MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Limb_E14.5_H3K4me2_20_26_0.646_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.227103	0.470266	0.10369	0.198941
0.016077	0.976302	0.00293	0.004691
0.159176	0.770198	0.032798	0.037827
0.773606	0.045342	0.043898	0.137153
0.0	0.978024	0.014429	0.007547
0.018363	0.038975	0.930741	0.011921
0.0	0.882086	0.034269	0.083645
0.032152	0.038133	0.917323	0.012392
0.062462	0.658245	0.050483	0.228809

MOTIF	Liver_E16.5_H3K4me2_23_21_0.611_5.775237e-317
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.066944	0.89779	0.012339	0.022927
0.128198	0.844923	0.022026	0.004853
0.755992	0.115305	0.0	0.128703
0.0	0.943658	0.049566	0.006777
0.030716	0.01237	0.948761	0.008153
0.197203	0.745966	0.044402	0.012429
0.032682	0.0	0.962857	0.004461
0.139385	0.634428	0.0	0.226188
0.026851	0.086647	0.86723	0.019273

MOTIF	Limb_E11.5_H3K4me2_27_34_0.631_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.065263	0.731452	0.008052	0.195233
0.004283	0.896884	0.012094	0.086739
0.828392	0.0	0.099787	0.071821
0.0	1.0	0.0	0.0
0.045741	0.027258	0.915908	0.011093
0.0	0.590753	0.111864	0.297383
0.202314	0.009132	0.758773	0.02978
0.172454	0.688395	0.094007	0.045144
0.0	0.028619	0.92031	0.05107

MOTIF	Hindbrain_E16.5_H3K4me2_25_22_0.624_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.036551	0.734349	0.067546	0.161555
0.0	0.910172	0.039806	0.050021
0.796662	0.084542	0.0665	0.052296
0.0	0.983022	0.016978	0.0
0.02053	0.072461	0.699041	0.207967
0.118104	0.541358	0.022733	0.317805
0.111552	0.034236	0.838005	0.016206
0.0	0.891653	0.070063	0.038284
0.011212	0.057358	0.89803	0.033399

MOTIF	Neural-Tube_E15.5_H3K4me2_38_16_0.603_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.032533	0.793229	0.064848	0.10939
0.018673	0.926225	0.050483	0.00462
0.821676	0.074214	0.033298	0.070812
0.017118	0.938622	0.04426	0.0
0.153882	0.068043	0.665167	0.112909
0.104667	0.665611	0.106532	0.123191
0.150233	0.025359	0.804809	0.019599
0.048684	0.770422	0.052289	0.128605
0.031763	0.051749	0.880194	0.036294
0.429971	0.0	0.247822	0.322207

MOTIF	Forebrain_E15.5_H3K4me3_38_20_0.646_9.283582e-309
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.070325	0.828948	0.059164	0.041564
0.011931	0.825956	0.162113	0.0
0.872215	0.077094	0.012914	0.037777
0.002469	0.919135	0.075309	0.003087
0.21029	0.028324	0.74336	0.018026
0.064671	0.75129	0.034967	0.149072
0.120484	0.033823	0.755004	0.090689
0.087669	0.733765	0.072864	0.105702
0.024405	0.034168	0.869995	0.071431
0.262656	0.0	0.495072	0.242272
0.061145	0.199213	0.127698	0.611944

MOTIF	Liver_P0_H3K4me3_29_25_0.648_2.421142e-309
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.046816	0.731077	0.027474	0.194634
0.074158	0.842302	0.050846	0.032693
0.811838	0.094004	0.0	0.094158
0.0	0.987615	0.012385	0.0
0.247075	0.031069	0.708312	0.013544
0.0	0.945865	0.018938	0.035197
0.220794	0.049056	0.698519	0.03163
0.100905	0.718402	0.03722	0.143473
0.032551	0.071328	0.856101	0.04002

MOTIF	Limb_E12.5_H3K4me3_48_21_0.612_9.903187e-306
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.055758	0.806804	0.089619	0.047819
0.0	0.975748	0.019396	0.004856
0.875057	0.030321	0.014585	0.080037
0.0	0.927167	0.067472	0.005361
0.305522	0.024102	0.664253	0.006123
0.003228	0.920012	0.042345	0.034415
0.218276	0.003663	0.73131	0.046751
0.085373	0.739097	0.021103	0.154427
0.061558	0.010266	0.74921	0.178965
0.11047	0.064966	0.583217	0.241347

MOTIF	Stomach_E15.5_H3K4me3_34_20_0.654_4.483875e-311
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.06618	0.873852	0.016447	0.043521
0.015007	0.906208	0.018517	0.060268
0.862819	0.031483	0.033919	0.071779
0.008371	0.934994	0.056635	0.0
0.164339	0.059663	0.647272	0.128726
0.026001	0.794532	0.02891	0.150556
0.120638	0.030871	0.824117	0.024374
0.050574	0.74146	0.071044	0.136922
0.014921	0.047589	0.786306	0.151184
0.346185	0.091106	0.354415	0.208294

MOTIF	Intestine_P0_H3K4me3_20_20_0.691_2.648376e-309
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.041239	0.805329	0.0	0.153433
0.047431	0.931814	0.016849	0.003906
0.610104	0.097551	0.054636	0.237709
0.012181	0.910661	0.077158	0.0
0.026593	0.052504	0.839031	0.081872
0.0	0.682195	0.093415	0.22439
0.026882	0.022943	0.909541	0.040635
0.162347	0.678004	0.029615	0.130034
0.035713	0.032061	0.914739	0.017487

MOTIF	Liver_E12.5_H3K4me3_31_39_0.635_4.96831e-316
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.023485	0.756657	0.031352	0.188507
0.009886	0.92205	0.042127	0.025936
0.837425	0.087212	0.0	0.075363
0.0	0.968335	0.031665	0.0
0.012398	0.016218	0.953428	0.017956
0.008387	0.624126	0.0	0.367487
0.015063	0.0	0.984937	0.0
0.401866	0.483447	0.10049	0.014197
0.031444	0.059055	0.898948	0.010553

MOTIF	Stomach_E16.5_H3K4me3_37_32_0.632_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.069668	0.905982	0.0	0.024349
0.0	0.886296	0.040462	0.073242
0.910439	0.0	0.0	0.089561
0.0	0.942598	0.057402	0.0
0.026064	0.121317	0.834502	0.018116
0.063694	0.750974	0.014207	0.171125
0.015189	0.038539	0.928666	0.017605
0.163368	0.609412	0.063374	0.163846
0.023716	0.035051	0.737545	0.203688

MOTIF	Forebrain_E13.5_H3K9ac_21_20_0.605_6.106681e-312
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.029018	0.837299	0.113832	0.019851
0.835211	0.014769	0.039667	0.110353
0.0	0.910245	0.060704	0.029051
0.051228	0.05018	0.866929	0.031662
0.006417	0.934508	0.015593	0.043482
0.097513	0.017631	0.873677	0.011179
0.10848	0.626057	0.019875	0.245588
0.049411	0.04234	0.65401	0.254239
0.103399	0.012042	0.773923	0.110636
0.02634	0.592961	0.149312	0.231388

MOTIF	Limb_E13.5_H3K9ac_19_14_0.600_5.407622e-315
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.018533	0.921291	0.060176	0.0
0.855793	0.076186	0.018156	0.049865
0.062541	0.792563	0.06061	0.084287
0.047595	0.042056	0.688625	0.221725
0.016153	0.941497	0.013379	0.028971
0.032193	0.018921	0.948886	0.0
0.025226	0.744127	0.045852	0.184794
0.030297	0.176869	0.776792	0.016042
0.156279	0.034561	0.700743	0.108416
0.178698	0.230161	0.46054	0.130601

MOTIF	Limb_E11.5_H3K9ac_51_20_0.562_1.249296e-115
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.217695	0.123221	0.207036	0.452048
0.042417	0.894388	0.032064	0.031131
0.002888	0.922433	0.019121	0.055557
0.894721	0.065966	0.020746	0.018567
0.0	0.958524	0.037216	0.00426
0.062619	0.059235	0.868101	0.010045
0.088941	0.60653	0.015662	0.288867
0.316619	0.023441	0.635025	0.024915
0.020565	0.768147	0.074653	0.136636
0.053371	0.031156	0.849348	0.066125
0.127623	0.054012	0.615178	0.203187

MOTIF	Kidney_E16.5_H3K9ac_38_15_0.566_5.691848e-316
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.051616	0.85628	0.039911	0.052192
0.049478	0.858629	0.021289	0.070604
0.903409	0.0	0.034888	0.061703
0.003679	0.952759	0.034612	0.008949
0.213649	0.160874	0.604695	0.020781
0.064627	0.856729	0.044559	0.034085
0.219811	0.01094	0.729086	0.040163
0.066457	0.88702	0.018091	0.028432
0.160529	0.032506	0.780694	0.026272
0.201544	0.088821	0.553686	0.155949

MOTIF	Limb_E12.5_H3K9ac_18_19_0.609_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.212201	0.670141	0.016777	0.100882
0.851548	0.042694	0.053173	0.052585
0.0	0.886243	0.113757	0.0
0.248606	0.080214	0.652006	0.019174
0.0	0.94584	0.020314	0.033846
0.111816	0.014896	0.857651	0.015637
0.014657	0.78274	0.074234	0.12837
0.02694	0.029269	0.924771	0.019019
0.112917	0.025555	0.763244	0.098284

MOTIF	Cranio-Facial_E12.5_H3K9ac_23_12_0.597_3.764664e-300
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.074103	0.776194	0.019355	0.130348
0.035599	0.914416	0.038031	0.011954
0.808439	0.107804	0.018595	0.065161
0.005295	0.909441	0.075381	0.009883
0.129474	0.039259	0.797364	0.033902
0.0	0.912276	0.025223	0.0625
0.162387	0.022548	0.761309	0.053756
0.083931	0.58701	0.24162	0.087439
0.035136	0.037141	0.90872	0.019002
0.466555	0.124001	0.290278	0.119165
0.245044	0.452157	0.294441	0.008358

MOTIF	Stomach_E16.5_H3K9ac_55_33_0.557_2.743407e-214
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.061402	0.689677	0.0	0.248921
0.004471	0.962594	0.032935	0.0
0.847543	0.023384	0.008211	0.120862
0.0	0.983443	0.016557	0.0
0.132584	0.076205	0.774457	0.016754
0.0	0.698065	0.029768	0.272167
0.13831	0.047397	0.781967	0.032327
0.163716	0.672154	0.085528	0.078602
0.0	0.019071	0.808152	0.172777