MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Hindbrain_E11.5_H3K4me3_25_163_0.709_0
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.9	0.001	0.059	0.04
0.08	0.799	0.078	0.043
0.001	0.048	0.93	0.021
0.001	0.898	0.07	0.031
0.001	0.871	0.084	0.044
0.001	0.056	0.918	0.025
0.001	0.044	0.913	0.042
0.079	0.075	0.055	0.791

MOTIF	Lung_P0_H3K4me3_47_84_0.621_8.640293e-302
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.357224	0.0	0.457841	0.184935
0.120778	0.769469	0.109753	0.0
0.126245	0.109648	0.742527	0.021581
0.0	0.753092	0.054832	0.192076
0.042219	0.778324	0.047396	0.132061
0.0	0.040604	0.915973	0.043423
0.0	0.0	1.0	0.0
0.043744	0.0	0.0	0.956256
0.113305	0.777318	0.08436	0.025017

MOTIF	Midbrain_E15.5_H3K4me3_19_63_0.684_1.094299e-311
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.136256	0.0	0.598597	0.265147
0.090257	0.863367	0.046376	0.0
0.171036	0.036146	0.739582	0.053235
0.0	0.634054	0.108676	0.25727
0.030352	0.902557	0.06709	0.0
0.126663	0.024274	0.780493	0.06857
0.067184	0.0	0.932816	0.0
0.052143	0.047791	0.074697	0.825369
0.09952	0.785027	0.047236	0.068217

MOTIF	Intestine_E14.5_H3K4me2_48_165_0.584_0
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.001	0.101	0.897	0.001
0.812	0.131	0.001	0.056
0.001	0.997	0.001	0.001
0.088	0.125	0.716	0.071
0.001	0.726	0.001	0.272
0.132	0.623	0.001	0.244
0.25	0.001	0.748	0.001
0.001	0.001	0.824	0.174

MOTIF	Intestine_P0_H3K4me2_38_34_0.585_1.108234e-312
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.238064	0.0	0.591559	0.170376
0.004965	0.690739	0.077849	0.226447
0.02954	0.700766	0.0	0.269694
0.100344	0.731003	0.053444	0.115209
0.01072	0.067305	0.906342	0.015633
0.145017	0.035096	0.764422	0.055465
0.03948	0.857629	0.041319	0.061572
0.007743	0.0	0.977873	0.014384
0.107342	0.0	0.049678	0.84298
0.007677	0.992323	0.0	0.0

MOTIF	Heart_E11.5_H3K4me2_39_34_0.577_1.650179e-321
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.342708	0.160464	0.358713	0.138115
0.147945	0.796048	0.025535	0.030471
0.034362	0.834139	0.029187	0.102313
0.107469	0.800879	0.057585	0.034067
0.053629	0.015867	0.923556	0.006947
0.103426	0.03292	0.779912	0.083742
0.057552	0.728298	0.010302	0.203847
0.020918	0.018874	0.944504	0.015704
0.150509	0.023105	0.058288	0.768098
0.0	0.982967	0.017033	0.0

MOTIF	Lung_P0_H3K4me2_49_36_0.580_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.151556	0.80029	0.021739	0.026415
0.129073	0.791803	0.042501	0.036623
0.167894	0.762027	0.063991	0.006087
0.07343	0.053039	0.739734	0.133797
0.008833	0.037416	0.8851	0.06865
0.022812	0.699576	0.045417	0.232194
0.038238	0.0	0.917077	0.044685
0.058536	0.046698	0.071618	0.823148
0.004427	0.864793	0.041568	0.089212

MOTIF	Limb_E13.5_H3K4me3_48_53_0.626_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.526608	0.177116	0.0	0.296276
0.008045	0.93957	0.052385	0.0
0.005697	0.862675	0.045059	0.086569
0.118231	0.802195	0.05939	0.020185
0.021304	0.020147	0.82004	0.138508
0.08336	0.016322	0.825206	0.075112
0.059019	0.84964	0.047502	0.043839
0.061028	0.034375	0.875973	0.028624
0.064191	0.0	0.034708	0.901101

MOTIF	Liver_E12.5_H3K4me3_37_53_0.624_1.283282e-311
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.704442	0.0	0.0	0.295558
0.011018	0.747116	0.043919	0.197948
0.021698	0.861621	0.015206	0.101476
0.024862	0.929384	0.014385	0.031369
0.031522	0.0	0.941677	0.026801
0.16548	0.0	0.743502	0.091018
0.091878	0.804864	0.103257	0.0
0.148888	0.0	0.830628	0.020484
0.221471	0.0	0.0	0.778529

MOTIF	Hindbrain_E13.5_H3K4me3_50_40_0.615_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.027662	0.626362	0.055102	0.290874
0.104894	0.726542	0.018461	0.150102
0.052681	0.024305	0.717363	0.20565
0.016667	0.024715	0.951184	0.007434
0.045639	0.667019	0.049994	0.237347
0.012406	0.01246	0.902311	0.072823
0.10787	0.053668	0.063381	0.775081
0.0	0.931542	0.015221	0.053237
0.014498	0.918646	0.013357	0.053498

MOTIF	Heart_P0_H3K4me3_28_163_0.652_0
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.024	0.078	0.897	0.001
0.852	0.084	0.001	0.063
0.001	0.888	0.083	0.028
0.056	0.064	0.755	0.125
0.015	0.983	0.001	0.001
0.058	0.87	0.001	0.071
0.04	0.001	0.92	0.039
0.043	0.037	0.882	0.038

MOTIF	Midbrain_E13.5_H3K4me3_21_37_0.692_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.01656	0.734889	0.075106	0.173446
0.086892	0.648418	0.036705	0.227985
0.0	0.942895	0.024811	0.032294
0.057525	0.031967	0.875065	0.035443
0.143137	0.044185	0.747688	0.06499
0.04663	0.834831	0.053173	0.065365
0.009673	0.049623	0.893806	0.046898
0.033534	0.052172	0.046188	0.868106
0.0	0.866276	0.017548	0.116175

MOTIF	Midbrain_P0_H3K4me3_40_35_0.656_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.111796	0.80621	0.050202	0.031791
0.067663	0.758582	0.028735	0.14502
0.015153	0.77817	0.033082	0.173595
0.018448	0.052857	0.903642	0.025053
0.099045	0.087586	0.795487	0.017882
0.043553	0.670176	0.035189	0.251082
0.044451	0.007957	0.901621	0.045971
0.087892	0.045961	0.042139	0.824009
0.0	0.929066	0.032605	0.038329

MOTIF	Midbrain_E16.5_H3K4me3_35_37_0.659_5.794068e-309
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.266711	0.659044	0.0	0.074245
0.06204	0.93796	0.0	0.0
0.04697	0.833648	0.0245	0.094881
0.0	0.0	1.0	0.0
0.047809	0.0	0.739383	0.212808
0.0	0.860329	0.0	0.139671
0.0	0.0	0.972472	0.027528
0.565435	0.0	0.0	0.434565

MOTIF	Lung_P0_H3K4me3_18_39_0.694_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.168958	0.670619	0.016047	0.144376
0.0	0.874086	0.0	0.125914
0.0	0.039071	0.940038	0.020891
0.082348	0.046048	0.815323	0.056281
0.039285	0.675557	0.0	0.285158
0.0	0.022712	0.955988	0.0213
0.321861	0.0	0.018988	0.659152
0.0	0.900761	0.099239	0.0
0.017032	0.083928	0.803458	0.095582

MOTIF	Neural-Tube_E15.5_H3K4me3_25_36_0.670_2.154679e-315
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.184915	0.663493	0.082186	0.069406
0.00247	0.865612	0.0	0.131919
0.009806	0.024747	0.965447	0.0
0.004764	0.018428	0.870188	0.106619
0.057807	0.482132	0.01581	0.444251
0.0	0.060178	0.939822	0.0
0.086152	0.0	0.0	0.913848
0.021314	0.92999	0.019818	0.028878
0.052999	0.0	0.796215	0.150786

MOTIF	Limb_E15.5_H3K9ac_16_24_0.642_2.517882e-295
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.170561	0.277291	0.427722	0.124426
0.0	0.037565	0.952577	0.009857
0.785358	0.010011	0.01996	0.184671
0.0	0.918451	0.076782	0.004767
0.027134	0.014235	0.951313	0.007318
0.14822	0.716015	0.044425	0.09134
0.100972	0.67536	0.040752	0.182916
0.020604	0.05966	0.789183	0.130553
0.1996	0.031009	0.740042	0.029348
0.011845	0.963375	0.0	0.02478
0.157196	0.0	0.609402	0.233402

MOTIF	Kidney_P0_H3K9ac_20_32_0.625_7.008653e-314
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.007564	0.920982	0.034629	0.036825
0.00932	0.951846	0.0	0.038834
0.024996	0.05417	0.90342	0.017415
0.114926	0.060205	0.702627	0.122243
0.021295	0.648077	0.020338	0.31029
0.006437	0.060349	0.933214	0.0
0.157308	0.055834	0.0	0.786857
0.011665	0.968736	0.019599	0.0
0.257041	0.079984	0.568069	0.094905

MOTIF	Midbrain_E15.5_H3K9ac_17_36_0.658_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.024692	0.826349	0.078483	0.070477
0.031082	0.907444	0.017895	0.043579
0.018913	0.035753	0.945334	0.0
0.023209	0.058872	0.670119	0.2478
0.0	0.549681	0.049542	0.400777
0.01367	0.024624	0.950101	0.011605
0.195537	0.0	0.0	0.804463
0.009185	0.953645	0.037169	0.0
0.05153	0.084482	0.829858	0.034131

MOTIF	Neural-Tube_E14.5_H3K9ac_7_21_0.663_1.046476e-309
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.005069	0.745391	0.020236	0.229304
0.010168	0.969725	0.0	0.020108
0.098417	0.033586	0.852866	0.015131
0.094307	0.443349	0.384549	0.077794
0.028786	0.845535	0.076847	0.048832
0.02694	0.053933	0.798106	0.121021
0.054922	0.0	0.076927	0.868151
0.010919	0.926183	0.062898	0.0
0.114777	0.074683	0.763803	0.046737