MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Limb_E14.5_H3K4me2_66_38_0.556_2.735812e-145 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.264396 0.0 0.460306 0.275298 0.093344 0.835266 0.043585 0.027805 0.013436 0.91555 0.047443 0.023571 0.225383 0.107421 0.503223 0.163973 0.0 1.0 0.0 0.0 0.062103 0.031247 0.013916 0.892734 0.0 0.937874 0.062126 0.0 0.038007 0.017773 0.528172 0.416048 0.0 0.0985 0.9015 0.0 0.033863 0.894708 0.021815 0.049613 MOTIF Intestine_P0_H3K4me2_12_15_0.626_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.092735 0.746604 0.019638 0.141023 0.0 0.034632 0.965368 0.0 0.804241 0.102432 0.041367 0.05196 0.063213 0.029178 0.836293 0.071316 0.061727 0.776143 0.066439 0.09569 0.055826 0.036328 0.859619 0.048228 0.146491 0.07075 0.782759 0.0 0.197987 0.594221 0.015299 0.192494 0.013673 0.021253 0.960022 0.005052 MOTIF Liver_E11.5_H3K4me2_13_18_0.620_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.208974 0.579066 0.074289 0.137671 0.067656 0.036747 0.873383 0.022214 0.937252 0.019441 0.0 0.043306 0.042166 0.014243 0.902269 0.041322 0.105296 0.789889 0.048336 0.056478 0.245063 0.009058 0.713213 0.032666 0.095896 0.073605 0.766603 0.063895 0.066038 0.88995 0.019855 0.024158 0.01628 0.059183 0.892922 0.031614 MOTIF Lung_P0_H3K4me2_13_25_0.639_1.379081e-312 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.274401 0.568496 0.009184 0.147919 0.0 0.178225 0.817867 0.003908 0.847686 0.016971 0.034871 0.100473 0.0 0.088802 0.911198 0.0 0.114939 0.695043 0.06148 0.128539 0.04083 0.058982 0.846651 0.053537 0.100385 0.013908 0.851298 0.034409 0.073585 0.865384 0.033763 0.027268 0.038313 0.003098 0.812953 0.145636 MOTIF Intestine_P0_H3K4me3_44_61_0.627_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.08887 0.0 0.564021 0.347109 0.011658 0.90337 0.021233 0.063738 0.022791 0.893657 0.070975 0.012577 0.326006 0.0 0.447629 0.226365 0.047879 0.935795 0.016326 0.0 0.010843 0.069621 0.0 0.919536 0.0 0.91224 0.068132 0.019629 0.050828 0.041571 0.890668 0.016934 0.0 0.051834 0.948166 0.0 MOTIF Liver_E11.5_H3K4me3_56_63_0.598_9.753985e-266 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.022524 0.751389 0.0 0.226087 0.121236 0.638503 0.0 0.240262 0.0 0.40186 0.59814 0.0 0.954899 0.0 0.0 0.045101 0.0 0.049471 0.944783 0.005746 0.040276 0.922314 0.0 0.03741 0.047897 0.0 0.866043 0.08606 0.054867 0.095114 0.79351 0.056509 0.00732 0.912953 0.069105 0.010621 MOTIF Forebrain_E15.5_H3K4me3_33_76_0.663_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.157673 0.764512 0.077815 0.0 0.015695 0.935098 0.021749 0.027458 0.0 0.042324 0.957676 0.0 0.894173 0.0 0.045164 0.060663 0.0 0.051808 0.922313 0.025879 0.0 0.694848 0.138015 0.167136 0.07627 0.017754 0.891869 0.014107 0.259231 0.061537 0.626606 0.052626 0.0 0.719842 0.085254 0.194904 MOTIF Midbrain_E15.5_H3K4me3_54_51_0.618_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.183208 0.750025 0.025322 0.041445 0.058865 0.75624 0.069409 0.115486 0.114828 0.014554 0.845473 0.025144 0.0 0.992571 0.007429 0.0 0.223078 0.0 0.0 0.776922 0.0 0.685341 0.314659 0.0 0.066227 0.053205 0.812771 0.067798 0.0 0.036498 0.918448 0.045054 0.032677 0.743735 0.041102 0.182485 MOTIF Midbrain_P0_H3K4me3_47_50_0.629_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.115587 0.77247 0.054909 0.057033 0.020669 0.875851 0.055647 0.047833 0.184983 0.032293 0.749022 0.033701 0.0 0.991995 0.008005 0.0 0.110974 0.015219 0.030393 0.843413 0.0 0.643634 0.356366 0.0 0.072094 0.04641 0.815091 0.066405 0.0 0.039261 0.915133 0.045606 0.155611 0.5841 0.072195 0.188094 MOTIF Heart_P0_H3K4me2_74_97_0.536_1.564264e-152 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.606572 0.0 0.393428 0.0 0.0 1.0 0.0 0.0 0.035388 0.919317 0.0 0.045295 0.0 0.036237 0.963763 0.0 0.921906 0.0 0.0 0.078094 0.0 0.0 0.964134 0.035866 0.185371 0.043322 0.292927 0.47838 0.0 0.0 0.939485 0.060515 0.071376 0.042529 0.784695 0.1014 MOTIF Intestine_E14.5_H3K4me2_59_27_0.570_5.188527e-221 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 1.0 0.0 0.0 0.014172 0.790511 0.145519 0.049798 0.018057 0.015422 0.933722 0.032799 0.884276 0.0 0.060862 0.054862 0.0 0.016293 0.899021 0.084685 0.293284 0.005668 0.537206 0.163842 0.022299 0.099634 0.873072 0.004995 0.080258 0.033086 0.7605 0.126155 0.026435 0.953799 0.0 0.019766 MOTIF Limb_E12.5_H3K4me2_55_98_0.571_3.573543e-221 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.933762 0.066238 0.0 0.084598 0.801041 0.11436 0.0 0.0 0.0 1.0 0.0 0.948505 0.0 0.0 0.051495 0.0 0.0 1.0 0.0 0.0 0.06286 0.710822 0.226318 0.065484 0.0 0.877386 0.05713 0.086512 0.0 0.710057 0.203431 0.536135 0.385358 0.078507 0.0 MOTIF Forebrain_E13.5_H3K4me3_67_75_0.596_2.834685e-240 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.0 0.228753 0.46164 0.309607 0.070866 0.573952 0.057639 0.297543 0.207243 0.451141 0.029402 0.312214 0.025408 0.91145 0.014972 0.04817 0.003375 0.990508 0.006117 0.0 0.086609 0.038814 0.01984 0.854737 0.009224 0.967099 0.012073 0.011604 0.051596 0.020156 0.880827 0.047422 0.0 0.057122 0.936822 0.006056 0.0 0.908211 0.039669 0.05212 MOTIF Cranio-Facial_E11.5_H3K4me3_52_77_0.622_3.242802e-279 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.027926 0.417035 0.215501 0.339538 0.068187 0.798041 0.024317 0.109455 0.057656 0.843463 0.027992 0.070889 0.0 0.961146 0.038854 0.0 0.187655 0.02509 0.04143 0.745825 0.0 0.984193 0.015807 0.0 0.00577 0.0 0.962901 0.031328 0.0 0.046976 0.945759 0.007265 0.047676 0.616028 0.024437 0.311859 MOTIF Intestine_E16.5_H3K4me3_73_77_0.539_8.922887e-106 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.196089 0.695208 0.022771 0.085932 0.027479 0.860811 0.016037 0.095674 0.0 0.960513 0.039487 0.0 0.292789 0.047122 0.0 0.660089 0.0 0.976956 0.023044 0.0 0.041193 0.018111 0.767819 0.172877 0.024119 0.0 0.975881 0.0 0.047129 0.761798 0.015019 0.176054 0.02048 0.662553 0.248051 0.068915 MOTIF Forebrain_E15.5_H3K4me3_62_78_0.589_6.387631e-233 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.01098 0.765044 0.032159 0.191817 0.287329 0.60716 0.022072 0.083439 0.048328 0.858182 0.082673 0.010817 0.0 0.972228 0.027772 0.0 0.091318 0.0 0.0 0.908682 0.0 0.975226 0.024774 0.0 0.06233 0.07995 0.847625 0.010096 0.003076 0.023889 0.947565 0.02547 0.013934 0.498375 0.46633 0.021361 MOTIF Hindbrain_E11.5_H3K4me3_49_95_0.633_2.651979e-281 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.944767 0.055233 0.0 0.025918 0.879179 0.094903 0.0 0.0 0.000623 0.999377 0.0 0.854274 0.031593 0.056393 0.05774 0.0 0.0 0.97838 0.02162 0.173026 0.022002 0.440743 0.364228 0.056624 0.0 0.776433 0.166944 0.075151 0.010972 0.675944 0.237932 0.024331 0.871014 0.104655 0.0 MOTIF Neural-Tube_E13.5_H3K4me3_54_49_0.612_1.683562e-315 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.883643 0.116357 0.0 0.020997 0.979003 0.0 0.0 0.0 0.02229 0.97771 0.0 1.0 0.0 0.0 0.0 0.0 0.015603 0.984397 0.0 0.023984 0.133559 0.604209 0.238249 0.06116 0.02171 0.862109 0.055021 0.309508 0.074819 0.553786 0.061887 0.29197 0.658551 0.049479 0.0 MOTIF Midbrain_E13.5_H3K4me3_62_87_0.600_2.290582e-261 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.880953 0.119047 0.0 0.052981 0.865583 0.061008 0.020428 0.0 0.039916 0.960084 0.0 0.893897 0.0 0.035248 0.070856 0.0 0.0 0.986337 0.013663 0.191846 0.026171 0.635724 0.146259 0.047909 0.07934 0.675974 0.196777 0.081247 0.013778 0.805863 0.099113 0.380516 0.551683 0.059399 0.008403 MOTIF Neural-Tube_E14.5_H3K4me3_47_94_0.630_2.424318e-315 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.950644 0.049356 0.0 0.050501 0.878614 0.050175 0.020709 0.0 0.011587 0.988413 0.0 0.832808 0.036987 0.092127 0.038079 0.0 0.0 1.0 0.0 0.103211 0.076725 0.521109 0.298955 0.080643 0.0 0.696558 0.222799 0.043291 0.02799 0.75149 0.177229 0.28554 0.71446 0.0 0.0