MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Intestine_E16.5_H3K9me3_39_180_0.535_2.196868e-18 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.025 0.726 0.227 0.022 0.668 0.001 0.287 0.044 0.034 0.265 0.001 0.7 0.058 0.783 0.138 0.021 0.878 0.021 0.046 0.055 0.001 0.126 0.013 0.86 0.055 0.053 0.891 0.001 0.329 0.001 0.503 0.167 MOTIF Intestine_P0_H3K9me3_7_173_0.544_5.226674e-30 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.001 0.397 0.001 0.601 0.095 0.511 0.339 0.055 0.789 0.001 0.209 0.001 0.001 0.103 0.001 0.895 0.225 0.753 0.021 0.001 0.997 0.001 0.001 0.001 0.069 0.075 0.001 0.855 0.001 0.001 0.844 0.154 0.175 0.001 0.823 0.001 0.335 0.384 0.001 0.28 MOTIF Forebrain_E12.5_H3K9me3_16_187_0.532_2.065208e-37 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.001 0.997 0.001 0.001 0.396 0.542 0.001 0.061 0.606 0.001 0.001 0.392 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.001 0.997 0.247 0.001 0.462 0.29 MOTIF Forebrain_P0_H3K9me3_6_170_0.541_2.914989e-14 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.621 0.111 0.022 0.246 0.907 0.001 0.052 0.04 0.072 0.03 0.001 0.897 0.033 0.93 0.036 0.001 0.997 0.001 0.001 0.001 0.029 0.001 0.001 0.969 0.031 0.001 0.914 0.054 0.064 0.04 0.871 0.025 MOTIF Hindbrain_P0_H3K9me3_3_180_0.540_2.750163e-15 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.79 0.067 0.001 0.142 0.892 0.001 0.023 0.084 0.038 0.021 0.03 0.911 0.059 0.872 0.068 0.001 0.973 0.001 0.001 0.025 0.025 0.001 0.001 0.973 0.07 0.021 0.822 0.087 0.034 0.03 0.935 0.001 MOTIF Intestine_E14.5_H3K9me3_30_180_0.532_6.183003e-13 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.023 0.922 0.001 0.054 0.055 0.837 0.031 0.077 0.981 0.001 0.001 0.017 0.001 0.006 0.001 0.992 0.001 0.001 0.95 0.048 0.928 0.047 0.001 0.024 0.001 0.069 0.029 0.901 0.224 0.001 0.196 0.579 MOTIF Limb_E15.5_H3K9me3_6_125_0.528_4.848482e-06 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.911089 0.0 0.066956 0.021955 0.861902 0.068895 0.0 0.069203 0.811553 0.002594 0.128473 0.05738 0.080573 0.171971 0.090743 0.656712 0.007727 0.970568 0.013988 0.007717 0.925812 0.006839 0.003705 0.063643 0.010827 0.057513 0.011561 0.920099 0.0752 0.0 0.9248 0.0 0.194329 0.0 0.800858 0.004813 MOTIF Cranio-Facial_E14.5_H3K9me3_17_181_0.535_6.036659e-46 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.558 0.033 0.118 0.291 0.001 0.997 0.001 0.001 0.057 0.881 0.001 0.061 0.99 0.001 0.008 0.001 0.001 0.001 0.001 0.997 0.02 0.001 0.978 0.001 0.937 0.025 0.001 0.037 0.001 0.171 0.001 0.827 MOTIF Limb_E14.5_H3K9me3_11_179_0.536_1.407785e-24 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.735 0.053 0.139 0.073 0.051 0.022 0.054 0.873 0.001 0.997 0.001 0.001 0.99 0.001 0.008 0.001 0.001 0.011 0.001 0.987 0.061 0.007 0.911 0.021 0.028 0.001 0.97 0.001 0.219 0.097 0.028 0.656 MOTIF Kidney_E16.5_H3K9me3_21_178_0.536_1.545785e-75 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.695 0.026 0.09 0.189 0.001 0.954 0.023 0.022 0.001 0.94 0.001 0.058 0.992 0.001 0.006 0.001 0.001 0.001 0.001 0.997 0.008 0.001 0.99 0.001 0.935 0.035 0.009 0.021 0.001 0.291 0.058 0.65 MOTIF Heart_E15.5_H3K9me3_31_178_0.525_9.73481e-15 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.669 0.033 0.297 0.001 0.037 0.001 0.034 0.928 0.001 0.997 0.001 0.001 0.899 0.038 0.013 0.05 0.028 0.001 0.001 0.97 0.029 0.001 0.942 0.028 0.001 0.049 0.949 0.001 0.179 0.08 0.042 0.699 MOTIF Kidney_E15.5_H3K9me3_9_181_0.532_4.082733e-21 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.752 0.03 0.04 0.178 0.001 0.935 0.033 0.031 0.001 0.969 0.005 0.025 0.966 0.001 0.001 0.032 0.065 0.001 0.031 0.903 0.022 0.001 0.976 0.001 0.936 0.022 0.001 0.041 0.001 0.274 0.056 0.669 MOTIF Limb_E13.5_H3K9me3_20_182_0.538_1.634703e-55 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.697 0.025 0.142 0.136 0.001 0.946 0.031 0.022 0.001 0.95 0.001 0.048 0.977 0.021 0.001 0.001 0.077 0.001 0.001 0.921 0.001 0.001 0.984 0.014 0.989 0.001 0.009 0.001 0.001 0.298 0.036 0.665 MOTIF Midbrain_E13.5_H3K9me3_7_180_0.538_1.730728e-29 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.653 0.022 0.135 0.19 0.001 0.948 0.02 0.031 0.026 0.921 0.001 0.052 0.959 0.018 0.001 0.022 0.1 0.001 0.022 0.877 0.001 0.001 0.986 0.012 0.976 0.001 0.001 0.022 0.001 0.214 0.001 0.784 MOTIF Neural-Tube_E13.5_H3K9me3_4_179_0.544_2.288975e-46 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.743 0.04 0.065 0.152 0.001 0.957 0.013 0.029 0.026 0.922 0.001 0.051 0.969 0.029 0.001 0.001 0.104 0.001 0.001 0.894 0.001 0.001 0.997 0.001 0.942 0.034 0.001 0.023 0.001 0.3 0.039 0.66 MOTIF Forebrain_E14.5_H3K9me3_8_177_0.528_9.814109e-12 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.001 0.656 0.237 0.106 0.223 0.406 0.053 0.318 0.745 0.001 0.101 0.153 0.091 0.019 0.001 0.889 0.109 0.115 0.634 0.142 0.838 0.042 0.001 0.119 0.199 0.09 0.176 0.535 0.144 0.001 0.288 0.567 MOTIF Midbrain_E16.5_H3K9me3_21_176_0.527_1.703224e-14 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.269 0.363 0.001 0.367 0.772 0.001 0.001 0.226 0.27 0.001 0.001 0.728 0.113 0.636 0.25 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.001 0.997 0.12 0.001 0.598 0.281 0.001 0.001 0.996 0.002 MOTIF Liver_E14.5_H3K9me3_54_119_0.507_0.01747762 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.949423 0.010836 0.01204 0.027701 0.654597 0.148681 0.183856 0.012867 0.036301 0.187584 0.008418 0.767697 0.016978 0.943647 0.015846 0.02353 0.918308 0.057223 0.006242 0.018227 0.056149 0.237426 0.004847 0.701578 0.010355 0.008156 0.906282 0.075206 0.01936 0.135211 0.833033 0.012395 0.839367 0.01948 0.0208 0.120353 MOTIF Neural-Tube_E14.5_H3K9me3_1_169_0.537_9.88463e-10 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.049 0.11 0.032 0.809 0.06 0.828 0.059 0.053 0.041 0.865 0.021 0.073 0.811 0.092 0.028 0.069 0.046 0.021 0.035 0.898 0.076 0.063 0.792 0.069 0.819 0.032 0.105 0.044 0.069 0.071 0.083 0.777 0.085 0.105 0.091 0.719 0.118 0.684 0.117 0.081 MOTIF Neural-Tube_E15.5_H3K9me3_15_177_0.535_5.197292e-18 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.657 0.001 0.11 0.232 0.641 0.106 0.001 0.252 0.096 0.179 0.135 0.59 0.143 0.7 0.023 0.134 0.997 0.001 0.001 0.001 0.261 0.001 0.001 0.737 0.189 0.001 0.646 0.164 0.086 0.001 0.795 0.118 MOTIF Stomach_E16.5_H3K9me3_29_180_0.532_1.065892e-17 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.362 0.071 0.564 0.003 0.132 0.001 0.232 0.635 0.051 0.744 0.003 0.202 0.688 0.001 0.31 0.001 0.001 0.167 0.001 0.831 0.223 0.025 0.751 0.001 0.126 0.066 0.807 0.001 0.151 0.526 0.001 0.322