MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Midbrain_P0_H3K27me3_18_16_0.528_2.860093e-18
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.069043	0.300978	0.210701	0.419278
0.086009	0.094141	0.793819	0.02603
0.023064	0.971433	0.002303	0.003201
0.05228	0.050771	0.88922	0.00773
0.081973	0.689587	0.00488	0.223559
0.02254	0.033863	0.838551	0.105046
0.009741	0.006845	0.811707	0.171707
0.25577	0.053645	0.006716	0.683869
0.111077	0.809557	0.059074	0.020292
0.047322	0.860301	0.039145	0.053232
0.710285	0.101648	0.036826	0.151241

MOTIF	Stomach_E16.5_H3K27me3_10_20_0.554_5.469824e-53
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.072925	0.082414	0.655273	0.189389
0.015225	0.935285	0.0	0.04949
0.108634	0.007797	0.8668	0.016768
0.014174	0.848292	0.002083	0.135451
0.128895	0.024715	0.779575	0.066815
0.094378	0.042286	0.838229	0.025106
0.111483	0.047028	0.011493	0.829995
0.012412	0.807538	0.051706	0.128344
0.035359	0.850435	0.045974	0.068232

MOTIF	Forebrain_E13.5_H3K4me3_45_34_0.650_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.006445	0.974848	0.018706	0.0
0.853392	0.058717	0.021791	0.0661
0.008729	0.024844	0.946202	0.020224
0.059845	0.739702	0.021474	0.178979
0.021457	0.067954	0.870182	0.040408
0.154604	0.761927	0.031002	0.052467
0.150771	0.643179	0.078675	0.127375
0.022109	0.779532	0.072044	0.126316
0.049332	0.025273	0.762611	0.162785
0.0	0.424439	0.544155	0.031407

MOTIF	Forebrain_E15.5_H3K4me3_45_70_0.628_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.854271	0.0	0.0	0.145729
0.154657	0.830878	0.014465	0.0
0.447021	0.355182	0.014712	0.183085
0.010582	0.005186	0.972147	0.012085
0.027516	0.958025	0.0	0.014458
0.043618	0.01568	0.839359	0.101343
0.020182	0.928372	0.025288	0.026158
0.07873	0.819867	0.021673	0.07973
0.150845	0.741481	0.073223	0.034451

MOTIF	Heart_E16.5_H3K4me3_46_23_0.592_2.055197e-209
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.652578	0.0	0.098642	0.24878
0.007282	0.970982	0.021736	0.0
0.901396	0.019146	0.042776	0.036682
0.019442	0.040289	0.821539	0.118729
0.348812	0.632784	0.008667	0.009737
0.041895	0.028371	0.888656	0.041078
0.008203	0.910953	0.055787	0.025057
0.224271	0.633159	0.058697	0.083873
0.018385	0.662155	0.277666	0.041794
0.018426	0.034563	0.937197	0.009814
0.417651	0.363707	0.038378	0.180264

MOTIF	Cranio-Facial_E12.5_H3K4me3_25_30_0.692_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0146	0.0	0.974222	0.011178
0.892135	0.0	0.038275	0.06959
0.060669	0.793198	0.0	0.146134
0.210051	0.762605	0.012236	0.015108
0.046383	0.016808	0.936809	0.0
0.023541	0.91345	0.044594	0.018415
0.109334	0.023187	0.808185	0.059294
0.238649	0.558198	0.050476	0.152677
0.108585	0.810089	0.025341	0.055986
0.0	0.393036	0.544728	0.062236

MOTIF	Hindbrain_E16.5_H3K4me3_43_53_0.615_2.956206e-314
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.238483	0.028812	0.574155	0.15855
0.158328	0.675669	0.049548	0.116455
0.080547	0.060682	0.826985	0.031785
0.003999	0.979621	0.0	0.01638
0.018943	0.031752	0.683441	0.265863
0.011287	0.0	0.968091	0.020622
0.115613	0.055441	0.0	0.828946
0.064509	0.885342	0.019815	0.030334
0.023099	0.929568	0.039499	0.007834

MOTIF	Neural-Tube_E14.5_H3K4me3_41_64_0.651_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.01275	0.0	0.984482	0.002768
0.84229	0.0	0.0216	0.13611
0.086102	0.818003	0.086636	0.009259
0.30357	0.62985	0.044963	0.021617
0.020845	0.048321	0.930834	0.0
0.175172	0.792323	0.028807	0.003699
0.025174	0.014378	0.862785	0.097663
0.232141	0.693488	0.03529	0.039081
0.086437	0.873499	0.0	0.040063

MOTIF	Stomach_E16.5_H3K4me3_61_48_0.594_3.574463e-251
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.09788	0.890925	0.011195
0.951091	0.0	0.0	0.048909
0.033105	0.939424	0.009862	0.017608
0.24393	0.645199	0.020165	0.090707
0.039558	0.019975	0.940467	0.0
0.035461	0.906175	0.043122	0.015242
0.082677	0.0	0.875084	0.042239
0.290771	0.532419	0.014189	0.162622
0.123242	0.759299	0.031949	0.08551
0.671762	0.0	0.137522	0.190716

MOTIF	Forebrain_E12.5_H3K4me2_24_6_0.629_6.274634e-322
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.0	0.783764	0.059696	0.15654
0.686993	0.030698	0.078578	0.203731
0.11887	0.740359	0.121441	0.01933
0.033873	0.918744	0.01833	0.029053
0.039483	0.068948	0.714749	0.17682
0.025084	0.825402	0.027183	0.122331
0.019687	0.002863	0.919977	0.057473
0.020692	0.939802	0.027727	0.011779
0.36758	0.490824	0.075957	0.065639
0.016559	0.010939	0.926474	0.046028
0.140957	0.0	0.825902	0.033141

MOTIF	Hindbrain_E13.5_H3K4me2_37_12_0.607_8.647328e-309
letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1
0.046063	0.735141	0.076068	0.142729
0.750275	0.040339	0.08137	0.128016
0.081491	0.899344	0.004467	0.014698
0.058457	0.649886	0.015287	0.27637
0.026701	0.059709	0.730093	0.183496
0.039983	0.87727	0.03181	0.050937
0.032669	0.04908	0.856613	0.061638
0.014791	0.942645	0.020387	0.022177
0.223298	0.685843	0.054574	0.036285
0.015538	0.026015	0.788547	0.1699
0.033399	0.012795	0.93941	0.014395
0.342443	0.045964	0.449126	0.162466

MOTIF	Limb_E13.5_H3K4me2_15_15_0.631_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.12513	0.836302	0.034408	0.00416
0.056038	0.672294	0.032527	0.23914
0.022144	0.057399	0.736846	0.183611
0.058345	0.830183	0.028803	0.082669
0.206015	0.009216	0.713194	0.071575
0.018058	0.931862	0.034402	0.015678
0.070231	0.8592	0.03373	0.03684
0.124508	0.021669	0.793145	0.060678
0.011659	0.009046	0.945414	0.033881
0.41745	0.163743	0.308502	0.110305

MOTIF	Liver_E12.5_H3K4me2_18_13_0.602_5.718328e-313
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.01093	0.927029	0.048651	0.01339
0.029103	0.902103	0.032251	0.036542
0.025216	0.003903	0.814723	0.156158
0.073432	0.735909	0.054799	0.135859
0.152575	0.063085	0.718208	0.066131
0.011593	0.942991	0.018103	0.027312
0.045777	0.863731	0.070513	0.019978
0.240613	0.020449	0.680224	0.058714
0.014679	0.013934	0.951674	0.019712
0.298359	0.0	0.377505	0.324137

MOTIF	Heart_P0_H3K4me2_2_28_0.652_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.86019	0.049779	0.040661	0.04937
0.152821	0.714817	0.0	0.132361
0.018886	0.798034	0.035223	0.147858
0.025101	0.017138	0.947729	0.010032
0.033488	0.898146	0.020982	0.047385
0.010287	0.034253	0.950578	0.004882
0.220592	0.587629	0.043591	0.148188
0.101873	0.650302	0.030845	0.21698
0.0	0.125712	0.874288	0.0

MOTIF	Intestine_E14.5_H3K4me2_8_23_0.659_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.824294	0.03511	0.038107	0.10249
0.139201	0.8084	0.038276	0.014123
0.044653	0.927702	0.027645	0.0
0.290266	0.037631	0.656184	0.015918
0.145857	0.811091	0.030201	0.012852
0.011918	0.022768	0.965314	0.0
0.152577	0.642544	0.07365	0.131229
0.0	0.914506	0.017729	0.067765
0.011529	0.063454	0.777181	0.147837

MOTIF	Limb_E15.5_H3K4me2_35_23_0.604_3.152582e-317
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.0	1.0	0.0
0.951517	0.0	0.0	0.048483
0.119231	0.832803	0.036338	0.011629
0.044515	0.889945	0.032059	0.033482
0.084956	0.0	0.69165	0.223394
0.074423	0.89503	0.0	0.030546
0.033928	0.040935	0.884247	0.040889
0.032709	0.951196	0.0	0.016095
0.251157	0.599836	0.015307	0.1337

MOTIF	Heart_E11.5_H3K4me2_19_36_0.604_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.917951	0.0	0.0	0.082049
0.0	0.932653	0.067347	0.0
0.009289	0.878768	0.0	0.111944
0.045531	0.0	0.645949	0.30852
0.028909	0.720336	0.017021	0.233734
0.126558	0.013764	0.859678	0.0
0.117868	0.707451	0.078415	0.096266
0.040654	0.774758	0.107016	0.077572
0.0	0.0	0.972779	0.027221

MOTIF	Neural-Tube_E15.5_H3K4me2_16_42_0.651_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.90118	0.0	0.0	0.09882
0.039325	0.901853	0.058822	0.0
0.046942	0.581101	0.059802	0.312155
0.025135	0.048436	0.685018	0.241412
0.048136	0.923008	0.023286	0.00557
0.06484	0.02155	0.907796	0.005814
0.126284	0.873716	0.0	0.0
0.081527	0.898064	0.0	0.020409
0.072627	0.032557	0.87332	0.021496

MOTIF	Cranio-Facial_E14.5_H3K9ac_44_39_0.581_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.177623	0.087951	0.699564	0.034862
0.011986	0.904017	0.007828	0.076169
0.150208	0.039685	0.735317	0.07479
0.0	0.864886	0.018623	0.116491
0.032388	0.01423	0.705505	0.247877
0.048734	0.037143	0.891934	0.022188
0.103109	0.0	0.026064	0.870827
0.07832	0.797165	0.075414	0.049101
0.018916	0.819395	0.02829	0.133399

MOTIF	Midbrain_P0_H3K9ac_58_52_0.560_1.258387e-150
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.183863	0.062396	0.694194	0.059546
0.039586	0.862154	0.060157	0.038104
0.11451	0.002482	0.619904	0.263104
0.006872	0.950773	0.034981	0.007373
0.029438	0.0	0.592537	0.378025
0.0	0.0	0.986066	0.013934
0.047463	0.086273	0.063708	0.802556
0.129307	0.853281	0.017412	0.0
0.030117	0.926557	0.026548	0.016779

MOTIF	Neural-Tube_E14.5_H3K9ac_26_55_0.623_1.550049e-312
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.0	0.814208	0.185792
0.806267	0.0	0.031976	0.161757
0.040123	0.921284	0.020373	0.01822
0.081639	0.891588	0.026773	0.0
0.091382	0.017697	0.890921	0.0
0.016483	0.92543	0.029386	0.0287
0.185031	0.0	0.814969	0.0
0.016486	0.618655	0.07285	0.29201
0.010469	0.665681	0.022897	0.300953