MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Hindbrain_E13.5_H3K9ac_68_61_0.541_1.759732e-142
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.679614	0.201731	0.118655
0.945691	0.038525	0.015784	0.0
0.0	0.026417	0.973583	0.0
0.693985	0.098157	0.061642	0.146217
0.223765	0.045136	0.720858	0.010241
0.507333	0.017199	0.467617	0.007851
0.014697	0.0	0.985303	0.0
0.084628	0.864672	0.040717	0.009983
0.049517	0.019467	0.859071	0.071945

MOTIF	Intestine_P0_H3K9ac_65_71_0.531_3.642652e-58
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.840952	0.045902	0.08888	0.024266
0.041355	0.070113	0.885421	0.003111
0.831446	0.077521	0.012902	0.07813
0.149453	0.025724	0.678301	0.146522
0.189857	0.032828	0.712844	0.064471
0.025858	0.066233	0.891474	0.016435
0.190565	0.768264	0.029737	0.011435
0.26419	0.026094	0.68119	0.028526
0.010624	0.01341	0.970945	0.00502

MOTIF	Hindbrain_E14.5_H3K9ac_47_68_0.575_2.800014e-281
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.034568	0.813735	0.118932	0.032764
0.806518	0.076631	0.014369	0.102481
0.0	0.015158	0.984842	0.0
0.302998	0.058393	0.452432	0.186177
0.029673	0.005499	0.873392	0.091437
0.021638	0.011304	0.949146	0.017912
0.288037	0.086516	0.619896	0.005552
0.059356	0.90999	0.003001	0.027652
0.059421	0.019348	0.92123	0.0

MOTIF	Midbrain_E14.5_H3K9ac_68_48_0.552_8.734333e-99
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.067592	0.932408	0.0	0.0
0.909562	0.054133	0.0	0.036305
0.0	0.06135	0.93865	0.0
0.209517	0.051429	0.20125	0.537804
0.0242	0.028021	0.947779	0.0
0.037056	0.024145	0.906739	0.03206
0.019363	0.08049	0.900147	0.0
0.006604	0.936653	0.0	0.056743
0.054645	0.0	0.93553	0.009825
0.0	0.040111	0.699019	0.26087

MOTIF	Midbrain_E11.5_H3K27ac_39_12_0.540_5.912925e-43
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.230001	0.458107	0.291885	0.020007
0.823764	0.074212	0.064546	0.037478
0.073628	0.029414	0.885798	0.011159
0.088225	0.264199	0.595828	0.051749
0.176913	0.028777	0.674022	0.120287
0.064737	0.032713	0.889837	0.012713
0.122499	0.142809	0.731657	0.003035
0.03538	0.883647	0.02893	0.052043
0.075912	0.015107	0.821421	0.087561
0.005232	0.090102	0.879199	0.025467

MOTIF	Midbrain_P0_H3K27ac_27_11_0.553_2.054407e-212
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.745459	0.152927	0.036776	0.064839
0.008083	0.052841	0.880418	0.058658
0.026969	0.33473	0.621957	0.016344
0.04442	0.03042	0.903959	0.021201
0.240798	0.174296	0.569655	0.015251
0.02507	0.052911	0.922019	0.0
0.056357	0.933014	0.0	0.010629
0.031085	0.0366	0.888022	0.044292
0.00988	0.25706	0.689087	0.043973

MOTIF	Hindbrain_E11.5_H3K27me3_51_55_0.506_3.630593e-07
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.877532	0.055616	0.0	0.066852
0.028337	0.02788	0.832064	0.111719
0.163746	0.040657	0.754447	0.04115
0.04693	0.0	0.883327	0.069743
0.058711	0.047867	0.864127	0.029295
0.178381	0.006511	0.815108	0.0
0.043706	0.904325	0.0	0.051969
0.364678	0.010986	0.611262	0.013074
0.009744	0.274024	0.716232	0.0

MOTIF	Lung_E16.5_H3K4me3_34_28_0.636_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.800723	0.099413	0.00798	0.091884
0.020347	0.0	0.9714	0.008253
0.231775	0.072591	0.612341	0.083293
0.33297	0.045202	0.571528	0.0503
0.045086	0.052411	0.795555	0.106948
0.018729	0.049087	0.92921	0.002974
0.054706	0.802287	0.023625	0.119383
0.017486	0.012465	0.953531	0.016519
0.009422	0.150784	0.83046	0.009333

MOTIF	Midbrain_E12.5_H3K4me3_51_22_0.617_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.077834	0.032397	0.814846	0.074923
0.849166	0.030191	0.059776	0.060867
0.078673	0.005778	0.913295	0.002255
0.038963	0.03745	0.906642	0.016944
0.364488	0.042104	0.569754	0.023654
0.035705	0.044901	0.833706	0.085689
0.181185	0.036878	0.777964	0.003973
0.079894	0.770376	0.03155	0.11818
0.056873	0.016331	0.910641	0.016155
0.005611	0.200704	0.78156	0.012125

MOTIF	Liver_E12.5_H3K4me3_27_19_0.648_3.987282e-309
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.005402	0.973842	0.004576	0.01618
0.02003	0.057687	0.8727	0.049584
0.001411	0.795872	0.0	0.202717
0.049896	0.865381	0.060289	0.024434
0.185972	0.704356	0.061459	0.048213
0.049739	0.825199	0.035016	0.090046
0.060221	0.835895	0.026282	0.077601
0.080291	0.054363	0.10103	0.764316
0.044153	0.734978	0.158675	0.062194
0.0	0.293703	0.444685	0.261612

MOTIF	Liver_E13.5_H3K4me3_26_17_0.643_1.806195e-314
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.005869	0.959336	0.005174	0.029621
0.016172	0.030079	0.818807	0.134941
0.002657	0.793439	0.011051	0.192854
0.036963	0.884972	0.056654	0.021411
0.116624	0.767169	0.035811	0.080396
0.084192	0.768163	0.044883	0.102762
0.010494	0.904173	0.022559	0.062774
0.108711	0.0349	0.108049	0.748341
0.036859	0.807451	0.105882	0.049807
0.044851	0.324892	0.397268	0.23299
0.0	0.065988	0.922366	0.011646

MOTIF	Forebrain_E12.5_H3K4me3_37_18_0.646_1.07967e-315
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.153114	0.283418	0.212821	0.350647
0.012286	0.949717	0.015623	0.022373
0.06194	0.037036	0.739671	0.161353
0.002689	0.896569	0.013841	0.086901
0.079677	0.670979	0.119691	0.129653
0.108149	0.697499	0.091311	0.103041
0.053443	0.789571	0.060575	0.096411
0.018676	0.905586	0.022555	0.053182
0.111844	0.044631	0.062744	0.780781
0.024517	0.827574	0.081316	0.066594

MOTIF	Limb_E15.5_H3K4me3_44_20_0.626_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.131265	0.443578	0.149323	0.275834
0.008183	0.955778	0.012527	0.023513
0.024818	0.062149	0.707693	0.20534
0.002215	0.874033	0.022663	0.101089
0.081673	0.702228	0.058321	0.157778
0.1224	0.696712	0.085209	0.095678
0.093135	0.727246	0.070167	0.109453
0.030093	0.894701	0.013113	0.062094
0.070839	0.01449	0.079615	0.835056
0.024206	0.879615	0.031357	0.064822

MOTIF	Hindbrain_E14.5_H3K4me3_34_24_0.662_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.004283	0.909769	0.015077	0.070871
0.082046	0.03917	0.737203	0.141581
0.010657	0.854485	0.027647	0.107211
0.061513	0.685254	0.053813	0.19942
0.089325	0.783592	0.035773	0.09131
0.08979	0.712111	0.071807	0.126292
0.025219	0.911209	0.013964	0.049608
0.09251	0.031503	0.063681	0.812305
0.030196	0.890064	0.029106	0.050634
0.005526	0.151048	0.574717	0.268709

MOTIF	Hindbrain_P0_H3K4me3_35_18_0.669_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.00913	0.958162	0.01221	0.020498
0.053364	0.042569	0.772669	0.131399
0.00421	0.85926	0.022166	0.114365
0.046032	0.724949	0.042377	0.186642
0.077251	0.811233	0.03776	0.073756
0.069235	0.757419	0.065051	0.108295
0.025993	0.921102	0.020789	0.032117
0.119398	0.065292	0.095791	0.719519
0.024335	0.798327	0.121174	0.056164
0.004428	0.197288	0.536593	0.261691

MOTIF	Forebrain_E14.5_H3K4me3_30_19_0.688_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.010334	0.946933	0.018027	0.024706
0.048474	0.031477	0.811817	0.108232
0.009922	0.899144	0.018708	0.072226
0.059283	0.637527	0.147113	0.156078
0.067897	0.764963	0.073655	0.093485
0.074155	0.747651	0.09107	0.087124
0.019792	0.922579	0.016592	0.041037
0.103952	0.026101	0.102344	0.767603
0.007543	0.850463	0.085483	0.056511

MOTIF	Neural-Tube_E15.5_H3K4me3_22_15_0.676_1.193084e-315
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.013281	0.939711	0.021365	0.025644
0.064191	0.046511	0.775496	0.113802
0.0095	0.89168	0.021146	0.077674
0.045223	0.630342	0.155723	0.168712
0.106681	0.721335	0.079217	0.092767
0.073835	0.770167	0.056464	0.099533
0.029639	0.910897	0.018859	0.040605
0.104491	0.030608	0.091382	0.773519
0.022789	0.833809	0.093551	0.049851
0.016473	0.056344	0.577883	0.3493

MOTIF	Midbrain_E16.5_H3K9ac_63_67_0.562_1.625092e-205
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.270128	0.0	0.729872
0.847126	0.0	0.152874	0.0
0.059631	0.024047	0.916322	0.0
0.042647	0.022885	0.895191	0.039277
0.070144	0.0	0.869049	0.060806
0.298793	0.043454	0.657753	0.0
0.342262	0.05722	0.600518	0.0
0.040824	0.933373	0.025803	0.0
0.035527	0.0	0.964473	0.0

MOTIF	Neural-Tube_E13.5_H3K9ac_57_71_0.551_2.266585e-200
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.791916	0.0	0.027202	0.180882
0.01335	0.028652	0.947669	0.01033
0.043143	0.04829	0.868648	0.03992
0.156605	0.040355	0.662069	0.140971
0.336031	0.0	0.648314	0.015654
0.156114	0.02286	0.807217	0.01381
0.082024	0.917976	0.0	0.0
0.044925	0.0	0.924174	0.030901
0.08461	0.91539	0.0	0.0

MOTIF	Heart_E12.5_H3K9ac_65_54_0.529_4.530686e-41
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.021857	0.89771	0.0	0.080433
0.90227	0.021366	0.061474	0.01489
0.0	0.023702	0.976298	0.0
0.066081	0.209375	0.692048	0.032496
0.131971	0.016435	0.721449	0.130145
0.464641	0.020996	0.492224	0.022139
0.03349	0.02852	0.93799	0.0
0.064218	0.929158	0.0	0.006625
0.015132	0.068016	0.853182	0.063669
0.759055	0.077337	0.0	0.163608

MOTIF	Limb_E12.5_H3K9ac_56_70_0.551_1.376478e-85
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	1.0	0.0	0.0
0.842136	0.0	0.0	0.157864
0.0	0.016512	0.983488	0.0
0.093424	0.0	0.870724	0.035852
0.359748	0.0	0.611137	0.029115
0.234796	0.014389	0.734143	0.016672
0.049039	0.203419	0.747542	0.0
0.0	0.890786	0.055349	0.053865
0.0	0.020083	0.93854	0.041377

MOTIF	Stomach_E16.5_H3K9ac_71_81_0.538_1.14459e-142
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.024811	0.795716	0.049323	0.13015
0.893458	0.048287	0.0256	0.032655
0.0	0.011585	0.988415	0.0
0.016372	0.027301	0.69499	0.261337
0.420317	0.0	0.42814	0.151544
0.036456	0.052254	0.88794	0.02335
0.03758	0.013916	0.932236	0.016269
0.081348	0.857579	0.036632	0.024441
0.03911	0.0	0.94499	0.0159