MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Hindbrain_E16.5_H3K27ac_45_46_0.538_4.114768e-100
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.045454	0.0	0.919492	0.035054
0.055217	0.044583	0.58071	0.31949
0.016991	0.880567	0.102442	0.0
0.030027	0.927327	0.027856	0.01479
0.037601	0.0	0.884031	0.078368
0.0	0.956665	0.043335	0.0
0.032189	0.671715	0.083737	0.212359
0.034289	0.952048	0.0	0.013663
0.149769	0.667883	0.040595	0.141753

MOTIF	Liver_E15.5_H3K27ac_27_41_0.541_1.781283e-156
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.042985	0.019851	0.928904	0.008261
0.060064	0.107118	0.797379	0.035439
0.074428	0.86151	0.064061	0.0
0.011992	0.896576	0.045077	0.046354
0.036563	0.0	0.948711	0.014726
0.009258	0.846894	0.054132	0.089716
0.197988	0.299997	0.061576	0.440439
0.0	0.962462	0.0	0.037538
0.075738	0.848329	0.050642	0.025291

MOTIF	Liver_P0_H3K27ac_14_11_0.544_9.047649e-290
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.145422	0.809372	0.026726	0.018481
0.026523	0.080912	0.699591	0.192973
0.024748	0.014022	0.937034	0.024196
0.282759	0.046531	0.657123	0.013586
0.091308	0.020693	0.872282	0.015717
0.060823	0.939177	0.0	0.0
0.026951	0.087574	0.851021	0.034454
0.046906	0.158422	0.721164	0.073508
0.09433	0.878837	0.0	0.026834
0.0	0.421755	0.578245	0.0

MOTIF	Stomach_E14.5_H3K27me3_29_56_0.530_1.221726e-08
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.080068	0.012735	0.880154	0.027043
0.018643	0.038263	0.79569	0.147405
0.103747	0.864538	0.021777	0.009938
0.087088	0.720092	0.021787	0.171032
0.032565	0.025045	0.902933	0.039457
0.012749	0.913973	0.037156	0.036122
0.147806	0.522987	0.0	0.329206
0.118648	0.881352	0.0	0.0
0.021743	0.8906	0.081249	0.006408

MOTIF	Neural-Tube_E12.5_H3K27me3_28_27_0.511_1.080883e-13
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.017393	0.004384	0.978224	0.0
0.012471	0.0	0.987529	0.0
0.315249	0.638832	0.032749	0.013169
0.092611	0.763445	0.022815	0.121129
0.040618	0.0	0.930597	0.028785
0.003502	0.942008	0.05449	0.0
0.02447	0.825355	0.089629	0.060545
0.024304	0.953925	0.012747	0.009024
0.253143	0.391431	0.238939	0.116487

MOTIF	Forebrain_E11.5_H3K4me2_57_68_0.593_1.442672e-321
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.030529	0.081204	0.703168	0.185098
0.11167	0.027658	0.860672	0.0
0.026553	0.0	0.94152	0.031927
0.263329	0.709973	0.0	0.026699
0.128541	0.767347	0.048963	0.055149
0.029441	0.015686	0.936604	0.01827
0.0	0.839503	0.148806	0.011691
0.113495	0.69408	0.031956	0.16047
0.111787	0.80632	0.040742	0.041151

MOTIF	Limb_E14.5_H3K4me2_41_30_0.591_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.121165	0.760765	0.070596	0.047474
0.141258	0.036535	0.706644	0.115563
0.195571	0.02149	0.684534	0.098404
0.0359	0.033081	0.90431	0.026709
0.142189	0.801718	0.033421	0.022672
0.249429	0.01506	0.670275	0.065236
0.012747	0.012885	0.938059	0.036309
0.020466	0.926025	0.041409	0.0121
0.04361	0.884088	0.009806	0.062497

MOTIF	Forebrain_P0_H3K4me2_37_11_0.607_2.309986e-310
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.027201	0.83486	0.120421	0.017518
0.047381	0.048914	0.809708	0.093997
0.174983	0.05663	0.715068	0.053319
0.014188	0.021849	0.901925	0.062038
0.180363	0.674358	0.114004	0.031275
0.05152	0.832914	0.058722	0.056844
0.084908	0.016798	0.794211	0.104082
0.014463	0.885565	0.04895	0.051021
0.103374	0.750404	0.073702	0.07252
0.676154	0.253311	0.0	0.070535

MOTIF	Kidney_P0_H3K4me2_25_8_0.617_1.13691e-309
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.072867	0.809269	0.111846	0.006017
0.080305	0.045025	0.780765	0.093905
0.161978	0.062909	0.734126	0.040987
0.076394	0.031526	0.854902	0.037179
0.133623	0.72543	0.080088	0.06086
0.059044	0.83826	0.04931	0.053386
0.049983	0.003034	0.880836	0.066147
0.02766	0.900022	0.037922	0.034396
0.09624	0.705887	0.107958	0.089915
0.525969	0.427574	0.0	0.046456

MOTIF	Heart_E16.5_H3K4me2_43_14_0.570_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.064531	0.766972	0.168497	0.0
0.088319	0.043049	0.715857	0.152775
0.059346	0.020258	0.892319	0.028077
0.016028	0.03194	0.901933	0.050099
0.06233	0.774294	0.095666	0.067709
0.052288	0.747249	0.022067	0.178397
0.044225	0.005285	0.835829	0.114661
0.026347	0.849405	0.088519	0.03573
0.024907	0.760041	0.063316	0.151736
0.033328	0.453759	0.095882	0.41703

MOTIF	Heart_P0_H3K4me2_51_22_0.573_6.192684e-317
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.020363	0.788514	0.184279	0.006844
0.033068	0.032376	0.77066	0.163895
0.02141	0.015822	0.941383	0.021385
0.056531	0.044035	0.808035	0.091399
0.059812	0.775788	0.068683	0.095716
0.054664	0.763782	0.01413	0.167424
0.139008	0.032088	0.700001	0.128904
0.01436	0.8555	0.066081	0.06406
0.02853	0.877665	0.052584	0.041221
0.003688	0.218145	0.197157	0.58101

MOTIF	Hindbrain_E16.5_H3K4me2_49_13_0.590_4.071071e-318
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.021629	0.939446	0.03444	0.004485
0.098572	0.039434	0.670761	0.191233
0.048071	0.064658	0.843687	0.043584
0.013702	0.023817	0.951576	0.010905
0.166612	0.720041	0.041492	0.071854
0.175723	0.611635	0.035184	0.177458
0.084214	0.02831	0.776487	0.110988
0.059345	0.928505	0.0102	0.00195
0.034029	0.868543	0.058718	0.038709
0.306535	0.052736	0.270261	0.370469

MOTIF	Lung_E14.5_H3K4me2_48_22_0.568_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.022304	0.938985	0.02315	0.015562
0.040985	0.01263	0.663575	0.28281
0.050817	0.011993	0.921752	0.015438
0.010076	0.0	0.907201	0.082723
0.051073	0.883826	0.039457	0.025644
0.05155	0.700516	0.059934	0.188001
0.188418	0.043469	0.681935	0.086178
0.113069	0.810376	0.019357	0.057197
0.035761	0.731228	0.054173	0.178838

MOTIF	Forebrain_E12.5_H3K4me2_41_23_0.606_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.008304	0.926095	0.031494	0.034107
0.14355	0.028023	0.751882	0.076545
0.114445	0.04148	0.826918	0.017157
0.011465	0.060923	0.87582	0.051792
0.029227	0.886901	0.039734	0.044138
0.230578	0.566936	0.029969	0.172516
0.077652	0.0	0.812244	0.110104
0.007865	0.856239	0.096158	0.039739
0.09053	0.767579	0.05178	0.090111

MOTIF	Heart_E13.5_H3K4me2_20_10_0.592_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.100444	0.860428	0.007633	0.031495
0.021969	0.058075	0.791698	0.128257
0.161873	0.041556	0.780558	0.016013
0.081515	0.039368	0.817212	0.061905
0.142307	0.802018	0.037146	0.01853
0.173944	0.738501	0.031416	0.056139
0.057121	0.012061	0.901635	0.029183
0.030747	0.899241	0.031419	0.038593
0.133632	0.691685	0.076392	0.098291
0.285932	0.425542	0.240877	0.047648

MOTIF	Cranio-Facial_E13.5_H3K4me2_12_9_0.628_5.928788e-322
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.020208	0.900531	0.053685	0.025576
0.090777	0.030474	0.843915	0.034834
0.180949	0.049502	0.719268	0.05028
0.01359	0.041306	0.898377	0.046727
0.201191	0.568935	0.062335	0.16754
0.049586	0.868774	0.051289	0.03035
0.133269	0.017863	0.816915	0.031953
0.049645	0.880987	0.046017	0.023351
0.039026	0.722126	0.060058	0.17879
0.089428	0.510451	0.195695	0.204427

MOTIF	Heart_E14.5_H3K4me2_24_35_0.589_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.133038	0.80261	0.053349	0.011004
0.037212	0.066534	0.845197	0.051056
0.219951	0.0	0.760465	0.019584
0.014642	0.023177	0.953212	0.008969
0.063616	0.709677	0.041691	0.185017
0.054246	0.832779	0.054749	0.058225
0.126694	0.035224	0.817758	0.020324
0.080214	0.817914	0.053839	0.048034
0.165104	0.728432	0.0	0.106464

MOTIF	Hindbrain_E12.5_H3K4me2_25_16_0.629_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.016	0.984	0.0	0.0
0.119635	0.030943	0.658592	0.19083
0.034617	0.036677	0.923767	0.004939
0.08637	0.028808	0.824967	0.059855
0.204233	0.68617	0.083885	0.025712
0.18556	0.72654	0.029192	0.058709
0.037542	0.01524	0.826102	0.121117
0.038665	0.883425	0.056157	0.021754
0.133605	0.789421	0.022388	0.054586
0.072553	0.273473	0.627032	0.026942

MOTIF	Limb_E11.5_H3K4me2_20_11_0.650_9.416891e-321
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.014008	0.943183	0.03714	0.005669
0.125222	0.028126	0.728276	0.118376
0.02749	0.005209	0.942861	0.02444
0.013848	0.019843	0.911478	0.054831
0.193318	0.577446	0.065826	0.16341
0.05597	0.837487	0.075578	0.030966
0.103262	0.032824	0.766222	0.097692
0.003895	0.940069	0.052087	0.00395
0.069179	0.671071	0.086689	0.173061
0.229966	0.153022	0.581868	0.035144

MOTIF	Limb_E15.5_H3K4me2_19_12_0.639_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.070905	0.88626	0.029324	0.013511
0.093601	0.032629	0.717723	0.156047
0.033185	0.020354	0.93135	0.015111
0.024108	0.030633	0.89781	0.047449
0.162621	0.675589	0.064866	0.096923
0.164134	0.745557	0.051056	0.039253
0.107848	0.029291	0.763654	0.099207
0.010512	0.914287	0.04773	0.027471
0.056612	0.759012	0.064145	0.120231
0.093449	0.142617	0.663476	0.100458

MOTIF	Forebrain_E13.5_H3K4me2_21_12_0.615_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.015201	0.807926	0.163882	0.01299
0.042861	0.050812	0.765614	0.140713
0.141687	0.070449	0.742211	0.045652
0.022335	0.014716	0.946959	0.01599
0.14084	0.66662	0.049612	0.142928
0.054825	0.89122	0.034056	0.019899
0.119654	0.029632	0.754554	0.09616
0.058213	0.903316	0.008596	0.029875
0.040134	0.772832	0.026816	0.160218
0.340204	0.158888	0.426709	0.074199

MOTIF	Midbrain_E11.5_H3K4me2_24_10_0.644_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.127338	0.69553	0.114109	0.063023
0.073297	0.029358	0.804252	0.093093
0.171529	0.057478	0.737818	0.033176
0.031763	0.022372	0.929134	0.016731
0.069011	0.765178	0.035344	0.130468
0.041858	0.877274	0.031738	0.049131
0.134099	0.024678	0.771987	0.069236
0.030826	0.898367	0.030897	0.039909
0.032051	0.735555	0.108951	0.123443
0.385597	0.178849	0.329815	0.105739