MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Midbrain_P0_H3K4me2_36_74_0.611_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.768383	0.0	0.0	0.231617
0.739216	0.226536	0.0	0.034248
0.130545	0.016993	0.825526	0.026936
0.0	0.039751	0.849911	0.110338
0.112835	0.0	0.85515	0.032015
0.0	0.148399	0.838342	0.013258
0.023208	0.0	0.976792	0.0
0.0223	0.837821	0.0	0.139878
0.0	0.0	1.0	0.0

MOTIF	Heart_E15.5_H3K4me2_50_83_0.568_2.484049e-301
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.882336	0.029326	0.088338	0.0
0.783746	0.0	0.162018	0.054235
0.155384	0.061584	0.769612	0.01342
0.021105	0.03375	0.706335	0.238809
0.013832	0.097713	0.87467	0.013785
0.04001	0.043202	0.894042	0.022746
0.215903	0.0	0.784097	0.0
0.245464	0.735817	0.018718	0.0
0.057257	0.0	0.942743	0.0

MOTIF	Lung_E16.5_H3K4me2_21_42_0.615_3.702553e-312
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.840534	0.130716	0.0	0.02875
0.788228	0.038143	0.173629	0.0
0.185681	0.013517	0.800801	0.0
0.135833	0.025329	0.602392	0.236447
0.056042	0.032163	0.862312	0.049483
0.040327	0.157556	0.776847	0.025269
0.019006	0.0	0.973768	0.007226
0.008876	0.909607	0.039102	0.042415
0.0	0.0	1.0	0.0

MOTIF	Neural-Tube_E12.5_H3K4me2_87_54_0.530_1.88766e-49
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
1.0	0.0	0.0	0.0
0.888862	0.0	0.111138	0.0
0.037916	0.0	0.962084	0.0
0.067247	0.066512	0.837124	0.029117
0.03039	0.059296	0.851733	0.058581
0.086944	0.028116	0.88494	0.0
0.024023	0.200999	0.774978	0.0
0.0	1.0	0.0	0.0

MOTIF	Neural-Tube_E12.5_H3K27me3_51_73_0.504_4.131339e-10
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.971906	0.0	0.0	0.028094
0.049057	0.012346	0.932588	0.006009
0.381805	0.033621	0.553045	0.031529
0.063495	0.010844	0.490598	0.435063
0.02404	0.009147	0.955457	0.011356
0.016566	0.016461	0.966973	0.0
0.0	0.947308	0.006121	0.046572
0.106223	0.0	0.850714	0.043063

MOTIF	Kidney_E14.5_H3K4me3_38_80_0.634_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.852243	0.119725	0.0	0.028033
0.739014	0.05098	0.179656	0.03035
0.107931	0.0	0.889308	0.002761
0.354064	0.025574	0.550094	0.070267
0.02052	0.0	0.768895	0.210586
0.016229	0.053784	0.901995	0.027992
0.050941	0.0	0.949059	0.0
0.116796	0.845114	0.0	0.03809
0.0	0.0	1.0	0.0

MOTIF	Limb_E12.5_H3K4me3_23_60_0.656_3.411555e-311
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.78196	0.088502	0.0	0.129538
0.933336	0.039384	0.0	0.02728
0.02245	0.044661	0.932889	0.0
0.269802	0.0	0.575211	0.154987
0.030467	0.238618	0.668813	0.062101
0.065916	0.221118	0.692453	0.020513
0.027593	0.027441	0.944966	0.0
0.015584	0.953476	0.0	0.030941
0.0	0.0	1.0	0.0
0.442913	0.18213	0.0	0.374957

MOTIF	Kidney_E15.5_H3K27me3_51_42_0.508_1.686994e-28
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.633589	0.0	0.0	0.366411
0.825166	0.018827	0.086221	0.069786
0.028427	0.024546	0.947027	0.0
0.28293	0.040845	0.653194	0.023031
0.078516	0.036507	0.876795	0.008182
0.294243	0.015338	0.665326	0.025093
0.020956	0.0	0.979044	0.0
0.0	1.0	0.0	0.0
0.0	0.0	1.0	0.0

MOTIF	Heart_E11.5_H3K4me3_42_84_0.620_1.434943e-310
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.032371	0.0	0.909159	0.058471
0.040133	0.0	0.908753	0.051114
0.027958	0.955104	0.0	0.016938
0.011582	0.0	0.89184	0.096578
0.049506	0.883889	0.053606	0.012999
0.0	0.545475	0.0	0.454525
0.405134	0.527583	0.022927	0.044356
0.04437	0.808981	0.054598	0.092051
0.041672	0.932567	0.0	0.025761

MOTIF	Lung_E15.5_H3K4me3_41_67_0.644_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.951388	0.0	0.0	0.048612
0.024264	0.012234	0.93982	0.023683
0.061974	0.129405	0.747159	0.061462
0.028622	0.04509	0.871487	0.054801
0.461483	0.018237	0.52028	0.0
0.0	0.145869	0.854131	0.0
0.0	0.916046	0.051155	0.032799
0.0	0.0	1.0	0.0
0.023913	0.799498	0.0	0.176589

MOTIF	Hindbrain_E13.5_H3K27me3_70_30_0.503_1.488403e-19
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.264827	0.0	0.735173	0.0
0.074841	0.925159	0.0	0.0
0.0	0.0	1.0	0.0
0.0	0.911079	0.046129	0.042792
0.0	0.954638	0.027713	0.017649
0.0	1.0	0.0	0.0
0.036105	0.85759	0.047242	0.059063
0.009494	0.743902	0.0	0.246605

MOTIF	Hindbrain_E15.5_H3K27me3_16_42_0.522_6.750465e-23
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.084635	0.059987	0.846351	0.009027
0.024501	0.0	0.890259	0.08524
0.0	0.898721	0.073133	0.028147
0.037409	0.0	0.9123	0.050291
0.081823	0.435257	0.018717	0.464204
0.002897	0.769769	0.0	0.227334
0.009997	0.946754	0.009197	0.034051
0.06203	0.792933	0.039415	0.105622
0.068106	0.855072	0.049761	0.027061

MOTIF	Limb_E15.5_H3K27ac_60_38_0.522_9.279824e-83
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.717342	0.084219	0.064929	0.133511
0.016037	0.060847	0.923116	0.0
0.048994	0.033913	0.846735	0.070358
0.028038	0.010695	0.937577	0.023691
0.21821	0.0	0.78179	0.0
0.256061	0.214672	0.513193	0.016074
0.0	0.919635	0.0	0.080365
0.0	0.0	1.0	0.0
0.0	0.846452	0.066209	0.087339

MOTIF	Neural-Tube_E15.5_H3K27me3_32_27_0.513_1.15594e-17
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.817438	0.149607	0.0	0.032955
0.017583	0.0	0.954669	0.027748
0.230514	0.026725	0.638544	0.104217
0.0	0.011703	0.971402	0.016895
0.106422	0.030435	0.858814	0.004328
0.331915	0.086157	0.581927	0.0
0.012929	0.958941	0.0	0.02813
0.049441	0.0	0.934784	0.015775
0.009529	0.862524	0.0	0.127946

MOTIF	Liver_E16.5_H3K27me3_17_65_0.583_9.602934e-98
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.789465	0.0	0.146182	0.064353
0.0	0.0	1.0	0.0
0.073129	0.049076	0.869683	0.008112
0.152973	0.056559	0.415057	0.37541
0.0	0.0	1.0	0.0
0.32268	0.029464	0.621255	0.026601
0.026604	0.973396	0.0	0.0
0.0	0.0	0.984109	0.015891
0.031217	0.797089	0.023389	0.148305

MOTIF	Neural-Tube_E13.5_H3K4me3_39_82_0.647_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.935673	0.0	0.050794	0.013533
0.045154	0.014632	0.940214	0.0
0.044777	0.108274	0.832632	0.014316
0.0	0.078251	0.695348	0.226402
0.0	0.048793	0.951207	0.0
0.485345	0.0	0.514655	0.0
0.033318	0.921236	0.028253	0.017194
0.036356	0.0	0.953698	0.009946
0.020556	0.766934	0.03282	0.17969

MOTIF	Stomach_P0_H3K4me3_54_88_0.622_8.095639e-308
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.801072	0.0	0.070692	0.128236
0.055582	0.049469	0.894949	0.0
0.099337	0.0	0.831122	0.069541
0.0	0.024168	0.698563	0.277269
0.0	0.042717	0.957283	0.0
0.426908	0.0	0.573092	0.0
0.044115	0.955885	0.0	0.0
0.054392	0.0	0.937754	0.007854
0.035625	0.920335	0.02329	0.02075

MOTIF	Heart_E14.5_H3K4me3_53_37_0.599_1.686577e-311
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.078714	0.754951	0.106889	0.059446
0.881956	0.021943	0.014747	0.081354
0.0	0.045755	0.954245	0.0
0.293028	0.089084	0.440892	0.176996
0.009598	0.032194	0.937055	0.021153
0.407424	0.020242	0.560193	0.012141
0.016005	0.038923	0.945072	0.0
0.051271	0.906227	0.028878	0.013624
0.013643	0.019267	0.967091	0.0
0.407886	0.336179	0.0	0.255935

MOTIF	Cranio-Facial_E13.5_H3K4me3_31_80_0.658_2.756886e-321
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.981142	0.018858	0.0	0.0
0.0	0.053541	0.946459	0.0
0.459989	0.001986	0.495299	0.042727
0.348711	0.022165	0.5801	0.049024
0.014323	0.025751	0.927919	0.032007
0.088437	0.041152	0.83115	0.039262
0.024934	0.955892	0.007048	0.012126
0.00542	0.0	0.981203	0.013377
0.047844	0.713371	0.020099	0.218686

MOTIF	Forebrain_P0_H3K4me3_35_76_0.661_8.966732e-312
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.767932	0.05654	0.029535	0.145994
0.0	0.0	1.0	0.0
0.274199	0.025174	0.676687	0.02394
0.122063	0.00914	0.655392	0.213405
0.042631	0.032112	0.910359	0.014898
0.054321	0.06608	0.690433	0.189166
0.027456	0.968685	0.0	0.003859
0.013523	0.02036	0.932452	0.033665
0.036823	0.925078	0.025298	0.012802

MOTIF	Neural-Tube_E11.5_H3K4me3_37_57_0.665_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.053245	0.782694	0.077142	0.086918
0.829904	0.0	0.04321	0.126887
0.005778	0.035859	0.958362	0.0
0.223811	0.033756	0.578026	0.164408
0.257805	0.03289	0.579851	0.129455
0.036507	0.022323	0.838493	0.102677
0.020901	0.030532	0.904579	0.043988
0.000172	0.947769	0.025086	0.026972
0.016013	0.010375	0.953303	0.02031

MOTIF	Stomach_E16.5_H3K4me3_48_61_0.612_2.692315e-310
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.654861	0.0	0.345139	0.0
0.022875	0.798252	0.055921	0.122952
0.860598	0.063478	0.015226	0.060698
0.007687	0.037747	0.951824	0.002742
0.0959	0.05581	0.590459	0.25783
0.054378	0.013769	0.725609	0.206244
0.050314	0.01171	0.825266	0.11271
0.026066	0.027289	0.938691	0.007954
0.030204	0.921597	0.032717	0.015482
0.019104	0.0	0.980896	0.0

MOTIF	Stomach_P0_H3K4me3_61_65_0.612_1.013469e-316
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.046071	0.78555	0.0	0.168379
0.810736	0.109652	0.0	0.079612
0.01494	0.045356	0.939704	0.0
0.382746	0.021985	0.306581	0.288688
0.020209	0.009425	0.927008	0.043359
0.0	0.017493	0.970469	0.012038
0.032771	0.041266	0.915514	0.010449
0.061703	0.898256	0.020045	0.019995
0.003153	0.0	0.996847	0.0