MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Midbrain_E15.5_H3K4me2_93_100_0.520_2.551292e-95
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.079528	0.0	0.889226	0.031246
0.045862	0.842911	0.060285	0.050941
0.167737	0.013825	0.784637	0.033801
0.007162	0.007	0.985838	0.0
0.018941	0.0	0.021896	0.959162
0.001877	0.021925	0.976198	0.0
0.064236	0.026487	0.828076	0.081201
0.352894	0.344183	0.26917	0.033753
0.87409	0.097503	0.0	0.028407
0.02491	0.48032	0.494769	0.0

MOTIF	Stomach_P0_H3K4me2_69_104_0.529_6.366217e-53
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.020919	0.0	0.777266	0.201814
0.0	0.931272	0.0	0.068728
0.191074	0.067874	0.649229	0.091823
0.131203	0.044002	0.800677	0.024117
0.078386	0.062048	0.0	0.859567
0.0	0.0	1.0	0.0
0.0	0.0	0.958554	0.041446
0.261533	0.018718	0.65995	0.059799
0.900572	0.056988	0.0	0.04244

MOTIF	Forebrain_E15.5_H3K4me2_63_44_0.558_5.687781e-132
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.858349	0.0	0.141651
0.429286	0.149611	0.405368	0.015734
0.017901	0.946961	0.035137	0.0
0.055309	0.867067	0.0	0.077624
0.0	0.929261	0.016477	0.054262
0.905309	0.0	0.0	0.094691
0.0	0.89846	0.044865	0.056675
0.0	0.8964	0.076655	0.026944
0.126994	0.040722	0.753423	0.07886
0.029715	0.394602	0.295035	0.280649

MOTIF	Midbrain_E12.5_H3K4me2_40_172_0.597_0
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.001	0.844	0.001	0.154
0.165	0.676	0.001	0.158
0.18	0.818	0.001	0.001
0.997	0.001	0.001	0.001
0.001	0.997	0.001	0.001
0.001	0.997	0.001	0.001
0.001	0.013	0.985	0.001
0.143	0.675	0.181	0.001

MOTIF	Liver_E14.5_H3K27me3_50_48_0.502_2.09411e-11
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.767084	0.131391	0.101525	0.0
0.172748	0.77383	0.013613	0.03981
0.188281	0.743406	0.041306	0.027007
0.012651	0.892466	0.044553	0.05033
0.95383	0.0	0.0	0.04617
0.00364	0.952649	0.036857	0.006854
0.205736	0.680793	0.039334	0.074137
0.02714	0.049833	0.898412	0.024614
0.148647	0.566802	0.033452	0.251099

MOTIF	Cranio-Facial_E12.5_H3K4me2_33_40_0.607_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.247097	0.745649	0.0	0.007254
0.723808	0.154248	0.034981	0.086964
0.0	0.922196	0.028696	0.049109
0.0	0.990295	0.009705	0.0
0.087541	0.058841	0.490901	0.362717
0.160264	0.833626	0.0	0.006109
0.008872	0.022627	0.953219	0.015282
0.018942	0.048076	0.896977	0.036005
0.062409	0.094704	0.801379	0.041508

MOTIF	Hindbrain_E16.5_H3K4me2_46_31_0.593_2.900605e-313
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.075887	0.80884	0.069951	0.045322
0.798647	0.082512	0.035877	0.082965
0.004526	0.925155	0.053031	0.017287
0.005606	0.944667	0.031502	0.018225
0.146164	0.021499	0.676848	0.155488
0.311698	0.668627	0.001383	0.018292
0.019119	0.031837	0.942062	0.006982
0.025096	0.045702	0.882946	0.046256
0.204673	0.040634	0.543922	0.210771

MOTIF	Intestine_E14.5_H3K4me2_45_31_0.592_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.082331	0.830929	0.064262	0.022479
0.782153	0.061581	0.030921	0.125344
0.001879	0.904308	0.08556	0.008253
0.043924	0.917069	0.036718	0.002289
0.126814	0.050375	0.79895	0.023861
0.22206	0.598922	0.013656	0.165362
0.013701	0.025607	0.960692	0.0
0.122474	0.049546	0.730278	0.097701
0.215776	0.037398	0.628061	0.118765

MOTIF	Forebrain_E11.5_H3K4me2_71_44_0.561_4.571331e-117
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.007022	0.719893	0.053346	0.219739
0.001726	0.948705	0.006009	0.04356
0.867584	0.052442	0.0	0.079974
0.011759	0.762018	0.097516	0.128708
0.055785	0.873284	0.051396	0.019535
0.034215	0.027089	0.593048	0.345648
0.00209	0.968106	0.017908	0.011896
0.0195	0.034097	0.664794	0.281609
0.010654	0.014257	0.968616	0.006472
0.822607	0.067073	0.035464	0.074856

MOTIF	Cranio-Facial_E12.5_H3K4me2_45_24_0.582_3.570953e-268
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.192231	0.378985	0.034592	0.394192
0.151703	0.705558	0.032293	0.110445
0.054813	0.85719	0.054433	0.033565
0.88277	0.051257	0.007768	0.058204
0.004013	0.82662	0.058978	0.110389
0.171784	0.695709	0.035024	0.097483
0.016167	0.053243	0.901162	0.029428
0.204444	0.718361	0.04297	0.034225
0.025326	0.020058	0.918409	0.036207
0.021016	0.026639	0.891565	0.06078

MOTIF	Forebrain_E16.5_H3K4me2_42_36_0.592_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.196946	0.56592	0.183228	0.053906
0.054497	0.898498	0.03666	0.010345
0.873488	0.049199	0.021758	0.055554
0.008488	0.853128	0.076853	0.061531
0.159677	0.700909	0.04068	0.098734
0.081317	0.055235	0.845239	0.018209
0.115334	0.761291	0.027863	0.095511
0.020179	0.03697	0.882882	0.059969
0.040354	0.046732	0.828958	0.083956

MOTIF	Hindbrain_E14.5_H3K4me2_38_35_0.603_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.036398	0.89993	0.020878	0.042794
0.050243	0.847803	0.055855	0.046099
0.818322	0.068371	0.03097	0.082337
0.05118	0.893022	0.01864	0.037158
0.278285	0.511029	0.126882	0.083805
0.095652	0.025118	0.853844	0.025385
0.07414	0.889026	0.017145	0.019689
0.028735	0.042062	0.897773	0.031429
0.036832	0.026908	0.811507	0.124753

MOTIF	Limb_E15.5_H3K4me2_58_28_0.571_9.073278e-219
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.037806	0.743791	0.028987	0.189416
0.007177	0.938805	0.048063	0.005955
0.852812	0.050745	0.007814	0.088629
0.001399	0.833861	0.075298	0.089442
0.235303	0.648832	0.040732	0.075133
0.071077	0.044506	0.752382	0.132034
0.183884	0.769513	0.011491	0.035112
0.022074	0.020692	0.910435	0.046799
0.036039	0.041115	0.815547	0.107299
0.184886	0.012568	0.605997	0.196548

MOTIF	Hindbrain_E14.5_H3K4me2_57_47_0.574_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.102744	0.750617	0.06039	0.086249
0.250224	0.657811	0.013552	0.078413
0.006636	0.841719	0.151645	0.0
1.0	0.0	0.0	0.0
0.039429	0.859376	0.065785	0.03541
0.075084	0.798643	0.04187	0.084403
0.040051	0.016383	0.726957	0.216609
0.04308	0.883759	0.035254	0.037907
0.043655	0.0	0.716901	0.239445

MOTIF	Forebrain_E12.5_H3K4me2_89_71_0.534_2.745558e-128
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.035985	0.944396	0.009869	0.009749
0.260572	0.627307	0.03701	0.075111
0.0	0.987786	0.012214	0.0
0.911426	0.0	0.022429	0.066145
0.0	0.909853	0.074402	0.015745
0.048682	0.713807	0.005988	0.231522
0.034772	0.063471	0.895301	0.006456
0.248235	0.478235	0.04499	0.22854
0.0	0.030799	0.960423	0.008778

MOTIF	Kidney_P0_H3K4me2_54_38_0.574_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.071494	0.759885	0.0	0.168622
0.069987	0.710167	0.037515	0.182332
0.0	0.878311	0.105042	0.016647
0.924511	0.044509	0.0	0.03098
0.009011	0.837732	0.037591	0.115667
0.061236	0.724643	0.036095	0.178025
0.103614	0.059011	0.820167	0.017208
0.099058	0.755823	0.118093	0.027027
0.035272	0.057994	0.853451	0.053282

MOTIF	Midbrain_E16.5_H3K4me2_62_32_0.570_2.405864e-314
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.045555	0.807994	0.004182	0.142269
0.143941	0.719754	0.05693	0.079375
0.0	0.955729	0.040362	0.003908
0.910676	0.012166	0.003642	0.073516
0.006787	0.812104	0.107319	0.073789
0.096916	0.759224	0.05575	0.088109
0.03894	0.024828	0.801639	0.134593
0.117809	0.662438	0.093652	0.1261
0.021649	0.040539	0.915366	0.022447

MOTIF	Hindbrain_E13.5_H3K4me3_44_35_0.629_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.028102	0.781234	0.080947	0.109717
0.105498	0.632272	0.060017	0.202213
0.0	0.912184	0.082926	0.004889
0.868927	0.039418	0.0	0.091655
0.0	0.945052	0.045083	0.009865
0.124948	0.707436	0.0283	0.139315
0.030608	0.020583	0.81063	0.138179
0.120731	0.7719	0.042338	0.065031
0.038374	0.047418	0.872707	0.041502

MOTIF	Limb_E15.5_H3K4me3_40_34_0.639_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.147948	0.633408	0.049268	0.169377
0.002927	0.920639	0.045662	0.030772
0.86111	0.051394	0.031165	0.056332
0.0026	0.857922	0.056686	0.082793
0.108634	0.700352	0.100939	0.090075
0.091346	0.031854	0.782649	0.094152
0.139078	0.801652	0.035967	0.023304
0.021676	0.03444	0.894754	0.049131
0.093816	0.044004	0.776188	0.085992

MOTIF	Heart_E11.5_H3K4me3_36_34_0.629_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.931494	0.063372	0.005133
0.880691	0.050777	0.0	0.068532
0.004318	0.830074	0.080276	0.085333
0.038121	0.831271	0.041703	0.088905
0.041339	0.015944	0.832585	0.110133
0.147624	0.677567	0.028417	0.146393
0.027877	0.034014	0.830492	0.107618
0.021078	0.093391	0.737221	0.14831
0.156842	0.056334	0.673413	0.113412

MOTIF	Neural-Tube_E15.5_H3K4me3_47_44_0.612_8.625556e-276
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.909503	0.033486	0.057011
0.761454	0.079549	0.012073	0.146923
0.004138	0.954985	0.030375	0.010503
0.012579	0.732926	0.036726	0.21777
0.017415	0.039351	0.820967	0.122267
0.037359	0.761398	0.035715	0.165529
0.015877	0.053172	0.858459	0.072492
0.120466	0.055866	0.60034	0.223327
0.063888	0.010987	0.882835	0.04229
0.603519	0.019657	0.231559	0.145264

MOTIF	Hindbrain_P0_H3K9ac_67_45_0.554_1.170094e-227
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.155817	0.710427	0.053008	0.080748
0.144691	0.762629	0.036461	0.056219
0.0	0.95395	0.038014	0.008036
0.863121	0.046545	0.017521	0.072812
0.023495	0.90227	0.056424	0.01781
0.169295	0.550174	0.072063	0.208468
0.08044	0.023568	0.877808	0.018184
0.158259	0.718561	0.018848	0.104331
0.043375	0.006204	0.902948	0.047474

MOTIF	Stomach_P0_H3K9ac_58_21_0.558_3.618314e-132
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.135608	0.804811	0.033484	0.026096
0.021078	0.857343	0.025804	0.095776
0.908414	0.009312	0.01493	0.067343
0.017588	0.728521	0.169101	0.08479
0.059232	0.900453	0.010807	0.029507
0.180363	0.030413	0.757896	0.031328
0.192456	0.708713	0.022318	0.076513
0.030481	0.020278	0.904895	0.044345
0.017713	0.795534	0.065835	0.120918
0.505519	0.07514	0.224677	0.194663