MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Lung_E16.5_H3K4me3_49_76_0.597_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.75258	0.078557	0.114674	0.054189
0.010577	0.948779	0.035867	0.004778
0.060425	0.038718	0.844579	0.056278
0.0	0.794842	0.024578	0.18058
0.00731	0.779658	0.187507	0.025524
0.072074	0.482159	0.024014	0.421753
0.132042	0.786542	0.02296	0.058456
0.076255	0.052886	0.015905	0.854953
0.0	0.974167	0.025833	0.0

MOTIF	Midbrain_E16.5_H3K4me3_62_73_0.589_2.060902e-206
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.797571	0.0	0.0	0.202429
0.111157	0.036688	0.852155	0.0
0.898647	0.0	0.0	0.101353
0.046752	0.073819	0.857971	0.021458
0.09734	0.028526	0.850383	0.023751
0.0	0.457908	0.52932	0.012772
0.003148	0.0	0.996852	0.0
0.068567	0.765681	0.0	0.165751
0.0	0.055775	0.944225	0.0

MOTIF	Heart_E16.5_H3K9ac_45_26_0.553_2.068515e-152
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.596479	0.173489	0.070797	0.159235
0.011643	0.007796	0.980561	0.0
0.866351	0.061918	0.0	0.071731
0.030454	0.0	0.969546	0.0
0.393713	0.014571	0.490907	0.100809
0.0	0.861802	0.099952	0.038246
0.042399	0.072643	0.884957	0.0
0.325253	0.642483	0.0	0.032264
0.006664	0.03587	0.940769	0.016697
0.066782	0.846675	0.01892	0.067624
0.054814	0.865962	0.0	0.079224

MOTIF	Hindbrain_P0_H3K4me2_63_61_0.572_6.436796e-273
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.508539	0.0	0.474759	0.016702
0.917413	0.035753	0.0	0.046834
0.0	0.054065	0.945935	0.0
0.831232	0.0	0.087536	0.081232
0.144116	0.032519	0.823365	0.0
0.441181	0.025583	0.533236	0.0
0.039975	0.873862	0.062377	0.023786
0.011301	0.014408	0.961421	0.012869
0.03484	0.91124	0.0	0.05392

MOTIF	Midbrain_E16.5_H3K4me2_20_37_0.635_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.536477	0.427863	0.0	0.03566
0.0	0.064218	0.919124	0.016659
0.950126	0.0	0.0	0.049874
0.074154	0.100645	0.803054	0.022146
0.066756	0.048968	0.732072	0.152204
0.047307	0.916334	0.018131	0.018228
0.034445	0.0	0.965555	0.0
0.010582	0.879442	0.0	0.109976
0.264706	0.038745	0.679365	0.017184

MOTIF	Cranio-Facial_E12.5_H3K4me2_50_90_0.574_5.431326e-212
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.107139	0.892861	0.0
0.7488	0.072066	0.056066	0.123068
0.006109	0.088666	0.905224	0.0
0.723817	0.018235	0.044135	0.213812
0.030391	0.046243	0.921738	0.001628
0.05609	0.017653	0.703098	0.223159
0.244669	0.741353	0.009895	0.004083
0.055436	0.0	0.930889	0.013675
0.022542	0.846517	0.069337	0.061604

MOTIF	Limb_E11.5_H3K4me2_58_107_0.571_7.170517e-147
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.011308	0.28936	0.699332	0.0
0.860026	0.04032	0.071664	0.02799
0.199767	0.146076	0.654157	0.0
0.929403	0.043846	0.0	0.026751
0.040154	0.064678	0.890877	0.004291
0.202911	0.017227	0.765921	0.013941
0.066577	0.916827	0.0	0.016596
0.21633	0.005034	0.760306	0.018329
0.04315	0.861153	0.050755	0.044943

MOTIF	Lung_P0_H3K4me2_35_59_0.602_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.818787	0.027514	0.08532	0.06838
0.200857	0.092448	0.706694	0.0
0.736627	0.023885	0.025957	0.213531
0.02671	0.020589	0.901703	0.050998
0.035652	0.050679	0.886486	0.027183
0.044318	0.874957	0.058545	0.02218
0.120542	0.0	0.861991	0.017466
0.039679	0.779319	0.0	0.181002
0.00918	0.256232	0.734588	0.0

MOTIF	Neural-Tube_E14.5_H3K4me2_54_33_0.581_2.925538e-249
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.0	0.568444	0.431556	0.0
0.865346	0.017873	0.025273	0.091508
0.085588	0.056665	0.857747	0.0
0.905725	0.016256	0.039231	0.038788
0.010202	0.07154	0.918258	0.0
0.208554	0.057357	0.561358	0.172731
0.049367	0.911291	0.0	0.039342
0.006209	0.032177	0.961614	0.0
0.105351	0.765826	0.030236	0.098586
0.0	0.215646	0.775288	0.009065
0.673848	0.123356	0.0	0.202796

MOTIF	Liver_P0_H3K27me3_19_35_0.560_1.396704e-78
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.890376	0.071863	0.0	0.037762
0.186074	0.031609	0.68627	0.096048
0.88191	0.012264	0.061988	0.043838
0.182795	0.189886	0.60374	0.023579
0.035849	0.013619	0.93347	0.017062
0.109689	0.866562	0.019804	0.003945
0.009778	0.018586	0.965307	0.006329
0.0	0.959084	0.036007	0.00491
0.034017	0.348369	0.607706	0.009909

MOTIF	Forebrain_E12.5_H3K4me3_24_52_0.690_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.609629	0.286559	0.103812	0.0
0.036796	0.058513	0.859583	0.045107
0.852968	0.071419	0.009027	0.066586
0.046195	0.082424	0.662071	0.20931
0.0	0.01685	0.975147	0.008003
0.0	0.975422	0.024578	0.0
0.103839	0.015937	0.869246	0.010978
0.0	0.820616	0.011957	0.167427
0.344672	0.035137	0.587928	0.032263

MOTIF	Intestine_P0_H3K4me3_46_50_0.619_2.938449e-316
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.969	0.0	0.0	0.031
0.119638	0.0	0.8636	0.016762
0.854331	0.099728	0.0	0.045942
0.027456	0.024225	0.92996	0.018359
0.40261	0.099484	0.479251	0.018654
0.040724	0.900428	0.031828	0.02702
0.011521	0.034542	0.953937	0.0
0.277482	0.66217	0.024836	0.035511
0.0	0.025939	0.955669	0.018392
0.60837	0.189877	0.059123	0.142629

MOTIF	Heart_E11.5_H3K4me3_22_47_0.668_5.212297e-311
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.7665	0.050645	0.016429	0.166426
0.09886	0.210996	0.687606	0.002538
0.865087	0.045324	0.044979	0.044611
0.045058	0.038534	0.88861	0.027798
0.067717	0.11016	0.680201	0.141922
0.042512	0.918462	0.016129	0.022897
0.007582	0.036478	0.94737	0.00857
0.020793	0.729523	0.046806	0.202877
0.0	0.057008	0.731776	0.211216

MOTIF	Hindbrain_E15.5_H3K4me3_66_61_0.589_8.354666e-276
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.850849	0.0	0.0	0.149151
0.0	0.034619	0.965381	0.0
0.90617	0.0	0.0	0.09383
0.187554	0.032354	0.780092	0.0
0.051755	0.098042	0.81742	0.032783
0.08431	0.88297	0.03272	0.0
0.0	0.030595	0.969405	0.0
0.013766	0.915687	0.034277	0.03627

MOTIF	Forebrain_E12.5_H3K4me3_64_113_0.579_6.247203e-218
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.012733	0.069053	0.902271	0.015944
0.689094	0.018529	0.007036	0.285341
0.014061	0.288951	0.695252	0.001736
0.889876	0.110124	0.0	0.0
0.032008	0.052626	0.913612	0.001754
0.316767	0.049747	0.612937	0.020549
0.034471	0.924235	0.041294	0.0
0.121684	0.01769	0.822307	0.03832
0.048043	0.888295	0.04148	0.022182

MOTIF	Hindbrain_E13.5_H3K4me3_49_89_0.618_1.343745e-317
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.0	1.0	0.0
0.583098	0.02556	0.101112	0.290231
0.00874	0.051588	0.939672	0.0
0.740468	0.033121	0.0	0.226411
0.047101	0.029758	0.810599	0.112542
0.153521	0.024561	0.788856	0.033061
0.027478	0.901805	0.049282	0.021435
0.008264	0.010622	0.971845	0.009269
0.020817	0.847255	0.035335	0.096593

MOTIF	Stomach_P0_H3K4me3_68_87_0.596_6.246197e-195
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.013661	0.081016	0.889837	0.015486
0.656171	0.022823	0.094769	0.226237
0.0	0.179269	0.820731	0.0
0.81782	0.024559	0.036278	0.121343
0.025519	0.064718	0.909763	0.0
0.240272	0.0	0.759728	0.0
0.065834	0.802632	0.0	0.131534
0.007401	0.0	0.967521	0.025077
0.15381	0.78933	0.051637	0.005224

MOTIF	Cranio-Facial_E15.5_H3K9ac_32_29_0.633_1.209093e-240
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.0	0.804623	0.195377
0.74082	0.031272	0.085131	0.142778
0.019384	0.058082	0.922534	0.0
0.96297	0.0	0.0	0.03703
0.0	0.329506	0.670494	0.0
0.065616	0.046096	0.856351	0.031937
0.019602	0.972198	0.0	0.008199
0.011907	0.0	0.988093	0.0
0.036505	0.735421	0.045299	0.182775

MOTIF	Forebrain_E11.5_H3K9ac_44_30_0.588_3.944029e-267
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.033842	0.0	0.950729	0.015429
0.923609	0.026948	0.0	0.049444
0.039555	0.274718	0.681724	0.004004
0.848924	0.039485	0.023856	0.087735
0.021376	0.230558	0.725704	0.022362
0.288308	0.032276	0.654029	0.025388
0.053195	0.929383	0.0	0.017422
0.027692	0.022254	0.912478	0.037577
0.022278	0.860871	0.021976	0.094876
0.214807	0.074031	0.711163	0.0

MOTIF	Heart_P0_H3K9ac_37_47_0.583_1.794021e-205
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.009921	0.449558	0.525703	0.014818
0.922476	0.0	0.029383	0.048141
0.062488	0.05334	0.881094	0.003078
0.734161	0.063401	0.018018	0.18442
0.220444	0.014241	0.74877	0.016545
0.319907	0.030444	0.630455	0.019194
0.069009	0.909055	0.017977	0.003959
0.012553	0.0907	0.875022	0.021725
0.049579	0.716189	0.023627	0.210605
0.0	0.0	0.977118	0.022882

MOTIF	Hindbrain_E11.5_H3K9ac_38_88_0.590_4.108774e-191
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.011896	0.3841	0.590619	0.013385
0.842434	0.044809	0.028418	0.084339
0.057661	0.052572	0.889767	0.0
0.813185	0.095325	0.021706	0.069784
0.038519	0.075696	0.8749	0.010885
0.320275	0.0	0.576831	0.102894
0.0	0.976508	0.0	0.023492
0.024845	0.041587	0.910398	0.02317
0.135632	0.684344	0.0	0.180024

MOTIF	Forebrain_E12.5_H3K9ac_32_35_0.595_8.97146e-255
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.926507	0.045705	0.014666	0.013121
0.157163	0.050408	0.790676	0.001753
0.834645	0.0	0.041292	0.124062
0.120741	0.153575	0.680175	0.045509
0.177508	0.018259	0.782249	0.021984
0.109278	0.838474	0.034062	0.018186
0.036853	0.028222	0.92835	0.006575
0.05277	0.762939	0.052123	0.132167
0.021813	0.025477	0.855866	0.096844
0.103952	0.138942	0.090393	0.666712

MOTIF	Midbrain_P0_H3K9ac_33_59_0.593_8.439279e-266
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.922851	0.0565	0.0	0.020649
0.164019	0.056082	0.779898	0.0
0.783113	0.0383	0.078885	0.099702
0.020161	0.043899	0.827852	0.108088
0.073946	0.049164	0.575306	0.301584
0.006892	0.974423	0.0	0.018685
0.023698	0.101104	0.875199	0.0
0.0	0.710787	0.014832	0.274381
0.0	0.081642	0.918358	0.0

MOTIF	Neural-Tube_E13.5_H3K9ac_76_48_0.524_1.283413e-35
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.680405	0.319595	0.0
0.889461	0.0	0.0	0.110539
0.026295	0.056888	0.916817	0.0
0.911905	0.0	0.0	0.088095
0.113882	0.223808	0.647832	0.014478
0.034313	0.029782	0.917369	0.018536
0.04174	0.559167	0.39141	0.007683
0.082917	0.05676	0.860323	0.0
0.0	0.952794	0.0	0.047206