MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Forebrain_P0_H3K4me2_84_58_0.538_5.266215e-109 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.033959 0.913649 0.041966 0.010426 0.125931 0.775911 0.063872 0.034286 0.137656 0.052737 0.660079 0.149528 0.115564 0.220686 0.652034 0.011715 0.016124 0.032174 0.944241 0.007461 0.899682 0.031354 0.037457 0.031507 0.061447 0.015602 0.848439 0.074511 0.21254 0.045745 0.734538 0.007178 0.807953 0.065522 0.098013 0.028513 0.605519 0.394481 0.0 0.0 MOTIF Hindbrain_E15.5_H3K4me2_67_87_0.556_8.797681e-202 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.006823 0.606353 0.064586 0.322238 0.112115 0.679269 0.031264 0.177352 0.06838 0.026527 0.013132 0.891961 0.0 0.982808 0.017192 0.0 0.010595 0.755898 0.026838 0.20667 0.032797 0.762588 0.0 0.204615 0.038692 0.033527 0.880647 0.047134 0.016877 0.02539 0.942098 0.015635 0.768991 0.080325 0.064282 0.086402 MOTIF Stomach_E16.5_H3K4me2_38_158_0.595_3.520123e-311 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.024 0.362 0.08 0.534 0.035 0.17 0.092 0.703 0.018 0.929 0.029 0.024 0.021 0.928 0.026 0.025 0.04 0.274 0.658 0.028 0.033 0.012 0.941 0.014 0.045 0.036 0.91 0.009 0.861 0.044 0.041 0.054 0.294 0.039 0.642 0.025 0.225 0.134 0.612 0.029 0.224 0.181 0.571 0.024 0.51 0.259 0.183 0.048 MOTIF Cranio-Facial_E14.5_H3K4me3_89_113_0.536_9.788348e-74 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.098162 0.764648 0.09388 0.04331 0.093533 0.730524 0.034202 0.141742 0.071242 0.008113 0.096216 0.824428 0.000143 0.967379 0.027522 0.004956 0.0 0.848778 0.0 0.151222 0.292014 0.541189 0.020393 0.146404 0.184421 0.006275 0.79512 0.014184 0.0 0.018162 0.981838 0.0 0.862065 0.026168 0.057831 0.053936 MOTIF Hindbrain_E15.5_H3K4me3_81_76_0.563_1.293127e-228 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.120849 0.734782 0.103914 0.040456 0.121426 0.602045 0.026775 0.249755 0.065271 0.015386 0.009754 0.909588 0.001314 0.960396 0.004867 0.033423 0.006437 0.965518 0.0 0.028045 0.117328 0.753651 0.033283 0.095739 0.079454 0.02233 0.819347 0.078869 0.001203 0.018069 0.980728 0.0 0.64058 0.073998 0.115208 0.170214 0.184167 0.371932 0.343127 0.100774 MOTIF Lung_P0_H3K4me3_73_48_0.547_1.03471e-35 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.0 0.0 0.0 1.0 0.0 0.872265 0.0 0.127735 0.0172 0.814715 0.088067 0.080018 0.076421 0.722669 0.026618 0.174292 0.183684 0.019244 0.043547 0.753525 0.002034 0.988269 0.0 0.009697 0.063593 0.731736 0.171012 0.033659 0.110633 0.755341 0.02836 0.105666 0.132201 0.020587 0.839174 0.008038 0.000253 0.062604 0.937143 0.0 0.774125 0.077565 0.045263 0.103046 MOTIF Neural-Tube_E13.5_H3K4me3_60_64_0.595_1.699403e-225 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.066845 0.725031 0.03192 0.176204 0.133339 0.038204 0.039104 0.789353 0.001559 0.929235 0.045228 0.023978 0.08521 0.798265 0.036921 0.079604 0.114355 0.845608 0.0 0.040036 0.139623 0.162543 0.682665 0.015169 0.016975 0.058672 0.922447 0.001907 0.671498 0.045665 0.127818 0.155019 0.089254 0.102413 0.699194 0.109139 MOTIF Cranio-Facial_E13.5_H3K4me3_44_57_0.627_2.26923e-315 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.088858 0.694462 0.026815 0.189865 0.181261 0.139523 0.048126 0.63109 0.006711 0.810607 0.023855 0.158827 0.031519 0.670783 0.105173 0.192525 0.045972 0.868236 0.050535 0.035257 0.059623 0.119654 0.793359 0.027363 0.013142 0.008299 0.949281 0.029278 0.747108 0.045278 0.121621 0.085992 0.098587 0.052144 0.806251 0.043018 MOTIF Kidney_P0_H3K4me3_53_65_0.609_1.866195e-232 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.100887 0.6832 0.038249 0.177664 0.084724 0.090787 0.070941 0.753549 0.001286 0.925274 0.005319 0.068121 0.059749 0.642604 0.087757 0.20989 0.048935 0.869277 0.039247 0.04254 0.159697 0.058838 0.7677 0.013764 0.011585 0.020636 0.95384 0.013939 0.74177 0.064041 0.068375 0.125814 0.140949 0.037663 0.743596 0.077792 MOTIF Neural-Tube_E14.5_H3K4me3_64_71_0.605_1.707391e-195 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.109714 0.709768 0.057405 0.123114 0.174992 0.071337 0.056998 0.696673 0.001067 0.759978 0.045946 0.193009 0.0501 0.752894 0.050813 0.146193 0.04531 0.876998 0.041315 0.036377 0.16912 0.126943 0.690673 0.013263 0.007353 0.029862 0.954761 0.008025 0.82967 0.087463 0.04689 0.035977 0.04744 0.041173 0.904581 0.006805 MOTIF Midbrain_E15.5_H3K27ac_34_63_0.544_1.572461e-79 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.287976 0.618177 0.044607 0.04924 0.190131 0.069332 0.0 0.740537 0.015501 0.920981 0.044066 0.019453 0.343177 0.373307 0.216596 0.06692 0.062112 0.937888 0.0 0.0 0.029151 0.119935 0.816026 0.034887 0.00346 0.024459 0.965055 0.007026 0.824503 0.026769 0.076044 0.072683 0.192749 0.017397 0.789854 0.0 0.402083 0.483698 0.064896 0.049323 MOTIF Hindbrain_E12.5_H3K27ac_26_40_0.543_1.132279e-84 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.04377 0.687902 0.249269 0.019059 0.095194 0.209589 0.071103 0.624114 0.010185 0.899774 0.076421 0.013619 0.329555 0.281067 0.245875 0.143504 0.0 0.986104 0.0 0.013896 0.0 0.172358 0.796774 0.030868 0.0 0.05244 0.940784 0.006776 0.75914 0.058235 0.11526 0.067365 0.009572 0.00729 0.976976 0.006162 MOTIF Limb_E11.5_H3K27ac_22_53_0.544_1.46418e-37 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.052753 0.847248 0.039929 0.06007 0.117585 0.018154 0.096629 0.767633 0.006426 0.707946 0.034464 0.251163 0.217981 0.31129 0.228976 0.241753 0.0 0.994108 0.0 0.005892 0.031937 0.176987 0.718404 0.072672 0.020573 0.044362 0.918289 0.016776 0.70521 0.070268 0.153153 0.071369 0.022644 0.0 0.965565 0.011791 MOTIF Hindbrain_E14.5_H3K27ac_45_50_0.537_8.867848e-69 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.151658 0.662297 0.148684 0.037361 0.151496 0.049524 0.024862 0.774117 0.002573 0.769195 0.026409 0.201823 0.147865 0.695795 0.06429 0.092049 0.032624 0.931846 0.03553 0.0 0.054553 0.119466 0.764767 0.061214 0.009034 0.032466 0.956845 0.001654 0.607533 0.04749 0.114535 0.230441 0.027365 0.012354 0.929364 0.030918 MOTIF Neural-Tube_E11.5_H3K27ac_36_85_0.542_1.778938e-33 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.134212 0.796123 0.069666 0.0 0.07578 0.175169 0.035624 0.713428 0.001468 0.943738 0.0 0.054793 0.146001 0.46884 0.057771 0.327387 0.010036 0.923818 0.052086 0.01406 0.0 0.273673 0.654118 0.072208 0.038537 0.009968 0.945629 0.005867 0.48979 0.014261 0.182824 0.313124 0.120918 0.0 0.879082 0.0 MOTIF Kidney_E16.5_H3K27me3_30_77_0.521_9.49125e-13 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.141321 0.623402 0.036632 0.198645 0.030726 0.076772 0.079841 0.812662 0.025554 0.918378 0.0 0.056067 0.038587 0.880879 0.080534 0.0 0.167305 0.690816 0.070274 0.071606 0.152522 0.03339 0.793365 0.020724 0.024823 0.021449 0.953729 0.0 0.702957 0.038586 0.063894 0.194563 0.193102 0.063749 0.743149 0.0 MOTIF Intestine_P0_H3K27me3_27_76_0.529_9.242324e-19 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.065887 0.650504 0.158581 0.125028 0.184987 0.116245 0.045187 0.653581 0.0 0.936189 0.0 0.063811 0.098918 0.742655 0.086717 0.071711 0.091362 0.776777 0.048832 0.083029 0.265916 0.049621 0.658792 0.025671 0.028097 0.042044 0.902377 0.027482 0.782977 0.063557 0.066269 0.087198 0.060066 0.084851 0.838606 0.016477 MOTIF Limb_E11.5_H3K27me3_26_62_0.528_1.311223e-12 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.084151 0.613901 0.176841 0.125107 0.223801 0.022514 0.014741 0.738945 0.005862 0.943645 0.028069 0.022424 0.067609 0.838322 0.040925 0.053144 0.073211 0.867622 0.005603 0.053565 0.27302 0.087614 0.589005 0.050362 0.020273 0.01514 0.958514 0.006073 0.682048 0.103266 0.078047 0.136638 0.046148 0.074486 0.864366 0.015001 MOTIF Forebrain_E15.5_H3K27me3_18_72_0.523_1.072797e-13 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.135239 0.706473 0.029561 0.128726 0.087818 0.140647 0.039498 0.732037 0.005774 0.830823 0.038132 0.125271 0.098952 0.721877 0.057919 0.121252 0.115529 0.787565 0.016015 0.080891 0.050035 0.152974 0.733166 0.063825 0.013748 0.022117 0.958406 0.005728 0.659505 0.019944 0.119814 0.200737 0.084649 0.128776 0.777623 0.008951 MOTIF Midbrain_P0_H3K27me3_23_89_0.525_9.30789e-08 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.077459 0.60145 0.04544 0.275651 0.09093 0.220157 0.03344 0.655472 0.00552 0.892669 0.065016 0.036795 0.034216 0.721888 0.068684 0.175213 0.18464 0.74223 0.050533 0.022598 0.140845 0.188029 0.63544 0.035687 0.125389 0.024743 0.849867 0.0 0.706768 0.037607 0.220833 0.034793 0.100226 0.007813 0.891962 0.0 MOTIF Heart_E14.5_H3K9ac_45_64_0.552_3.978904e-131 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.076414 0.729946 0.038612 0.155027 0.068931 0.192586 0.016029 0.722454 0.005657 0.773292 0.060322 0.160729 0.070115 0.495249 0.114152 0.320484 0.058965 0.824009 0.086248 0.030777 0.11784 0.151097 0.659866 0.071197 0.024668 0.012757 0.961879 0.000696 0.754335 0.042603 0.138063 0.064998 0.114678 0.007328 0.849577 0.028418 MOTIF Kidney_E16.5_H3K9ac_58_76_0.554_2.616582e-109 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.059872 0.702762 0.051833 0.185533 0.018089 0.7383 0.017948 0.225663 0.267915 0.0051 0.011743 0.715242 0.003389 0.976045 0.020565 0.0 0.027167 0.764693 0.162851 0.045289 0.03407 0.068316 0.8834 0.014214 0.08855 0.029415 0.606586 0.275449 0.054058 0.031312 0.908881 0.005749 0.884813 0.0 0.078625 0.036562 MOTIF Limb_E13.5_H3K9ac_80_48_0.517_1.470364e-09 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 1.0 0.0 0.0 0.0 0.910834 0.0 0.0 0.089166 0.0 0.968331 0.0 0.031669 0.050422 0.058314 0.055794 0.83547 0.06413 0.771417 0.094071 0.070381 0.036884 0.896267 0.039284 0.027565 0.164735 0.035564 0.622865 0.176836 0.015618 0.009706 0.967106 0.00757 0.01264 0.0 0.98736 0.0 0.932379 0.02242 0.009289 0.035912 0.372966 0.078462 0.509494 0.039079 0.188243 0.025846 0.753854 0.032057 MOTIF Midbrain_E14.5_H3K9ac_86_113_0.510_3.249198e-09 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.128082 0.783441 0.026673 0.061804 0.228506 0.723915 0.030018 0.017561 0.082342 0.018145 0.051829 0.847684 0.000317 0.917163 0.08252 0.0 0.006951 0.952215 0.037678 0.003155 0.355825 0.375367 0.0 0.268808 0.033666 0.006883 0.95418 0.005272 0.008195 0.052622 0.939183 0.0 0.942444 0.0 0.0 0.057556