MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Forebrain_E11.5_H3K4me2_70_73_0.566_2.251266e-229
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.026842	0.085174	0.82079	0.067194
0.706497	0.04989	0.035151	0.208463
0.015676	0.131112	0.831236	0.021977
0.162743	0.031635	0.026461	0.779161
0.003743	0.971782	0.007057	0.017418
0.040123	0.802589	0.0933	0.063988
0.009375	0.784469	0.021328	0.184829
0.184724	0.009321	0.805955	0.0
0.037805	0.87352	0.055718	0.032957

MOTIF	Midbrain_P0_H3K4me2_52_81_0.578_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.069654	0.018978	0.824231	0.087137
0.691353	0.100211	0.0	0.208435
0.018016	0.041651	0.806224	0.134109
0.046116	0.09046	0.020984	0.84244
0.0	0.985066	0.0	0.014934
0.0	0.802171	0.197829	0.0
0.034522	0.843018	0.021427	0.101033
0.176876	0.0	0.806778	0.016346
0.17063	0.725789	0.075288	0.028293

MOTIF	Lung_P0_H3K4me2_68_87_0.534_3.829055e-136
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.74863	0.089534	0.045434	0.116401
0.016857	0.059308	0.856427	0.067408
0.049516	0.028583	0.025096	0.896805
0.058914	0.912667	0.020891	0.007529
0.00965	0.975237	0.0	0.015113
0.148994	0.503497	0.023566	0.323942
0.018363	0.0626	0.890292	0.028744
0.028738	0.591923	0.363303	0.016036
0.0	0.898468	0.101532	0.0

MOTIF	Stomach_E16.5_H3K4me2_85_95_0.531_9.579069e-136
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.805705	0.030347	0.078085	0.085863
0.005262	0.031492	0.878639	0.084607
0.015708	0.061793	0.067297	0.855201
0.002813	0.970753	0.026434	0.0
0.0	1.0	0.0	0.0
0.145613	0.562746	0.0	0.29164
0.147747	0.0	0.847672	0.004581
0.008998	0.708047	0.279968	0.002987
0.016468	0.898604	0.071253	0.013676

MOTIF	Kidney_E15.5_H3K4me3_44_81_0.637_4.373774e-313
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.05851	0.788256	0.095312	0.057922
0.270937	0.284241	0.425632	0.01919
0.867056	0.0	0.095284	0.03766
0.0	0.067218	0.759255	0.173528
0.036962	0.0	0.020459	0.942579
0.001409	0.873742	0.124849	0.0
0.055928	0.872459	0.071613	0.0
0.022624	0.975284	0.0	0.002092
0.062709	0.0	0.911488	0.025803
0.049304	0.715534	0.164481	0.070681

MOTIF	Kidney_E16.5_H3K4me3_62_108_0.592_2.577639e-289
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.00601	0.015315	0.959156	0.019519
0.822993	0.035421	0.050244	0.091342
0.012141	0.037849	0.826051	0.123959
0.18472	0.048685	0.0	0.766595
0.003301	0.948188	0.02817	0.02034
0.055578	0.918325	0.012026	0.014072
0.146409	0.609152	0.205717	0.038721
0.007139	0.0	0.98472	0.008142
0.106633	0.672615	0.059165	0.161587

MOTIF	Liver_P0_H3K4me3_48_62_0.587_2.836575e-184
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.124857	0.019272	0.837315	0.018556
0.80102	0.076075	0.064362	0.058543
0.0	0.00913	0.985199	0.00567
0.221355	0.074536	0.0	0.704109
0.0	0.938503	0.027302	0.034196
0.0	0.841223	0.158777	0.0
0.164341	0.650106	0.047067	0.138486
0.022582	0.0	0.969164	0.008254
0.196102	0.750788	0.041351	0.011758

MOTIF	Lung_E16.5_H3K4me3_50_49_0.596_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.181877	0.187277	0.188713	0.442133
0.026208	0.263053	0.601058	0.10968
0.648439	0.044919	0.024041	0.282601
0.009295	0.020889	0.965423	0.004393
0.091404	0.034471	0.035492	0.838633
0.001049	0.976555	0.007111	0.015285
0.01591	0.75796	0.056722	0.169408
0.040442	0.87722	0.043305	0.039033
0.063869	0.033687	0.871103	0.031341
0.119832	0.795641	0.070093	0.014434

MOTIF	Neural-Tube_E11.5_H3K4me3_42_34_0.649_1.840762e-309
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.180691	0.235092	0.26675	0.317467
0.150086	0.050096	0.627241	0.172576
0.725102	0.013284	0.06079	0.200824
0.007622	0.019012	0.938301	0.035066
0.232232	0.045116	0.0	0.722652
0.011224	0.931897	0.005366	0.051513
0.01373	0.848945	0.127322	0.010003
0.022303	0.887728	0.043948	0.046021
0.097688	0.015494	0.886817	0.0
0.012586	0.918772	0.023652	0.044989

MOTIF	Midbrain_P0_H3K4me3_75_115_0.553_9.749401e-126
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.864997	0.076929	0.00828	0.049795
0.007239	0.07197	0.889395	0.031395
0.025195	0.022886	0.323618	0.628301
0.004007	0.961449	0.034544	0.0
0.01575	0.98425	0.0	0.0
0.346403	0.568532	0.049909	0.035156
0.172031	0.0	0.827969	0.0
0.005667	0.881976	0.109385	0.002972
0.0	1.0	0.0	0.0

MOTIF	Hindbrain_E15.5_H3K4me3_70_80_0.586_1.35318e-279
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.750182	0.021335	0.104927	0.123556
0.0	0.035383	0.91559	0.049028
0.049458	0.0	0.02599	0.924552
0.005571	0.960569	0.03386	0.0
0.016046	0.931417	0.052537	0.0
0.171778	0.737531	0.048382	0.042308
0.046358	0.046943	0.881981	0.024718
0.033102	0.48073	0.485579	0.000589
0.016405	0.768667	0.214928	0.0

MOTIF	Kidney_E14.5_H3K4me3_70_40_0.587_3.34148e-215
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.863483	0.07434	0.018347	0.04383
0.015323	0.006742	0.953223	0.024712
0.080925	0.017863	0.0	0.901213
0.007925	0.970841	0.005522	0.015712
0.0	0.945168	0.024212	0.03062
0.022686	0.867943	0.054096	0.055274
0.151465	0.0	0.83763	0.010905
0.007899	0.436661	0.552744	0.002696
0.024134	0.963698	0.009782	0.002386

MOTIF	Forebrain_E16.5_H3K4me3_65_59_0.573_7.928831e-143
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.062791	0.162408	0.743621	0.03118
0.551317	0.101485	0.06484	0.282359
0.009406	0.034523	0.738386	0.217685
0.022297	0.092117	0.048019	0.837567
0.00119	0.986969	0.009121	0.00272
0.002025	0.984641	0.013334	0.0
0.104353	0.655583	0.0	0.240064
0.081143	0.020139	0.888351	0.010368
0.006961	0.909574	0.071634	0.01183
0.021518	0.904488	0.036286	0.037708

MOTIF	Cranio-Facial_E12.5_H3K4me3_75_100_0.561_7.163518e-161
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.810727	0.026648	0.074485	0.088141
0.020846	0.036089	0.865013	0.078052
0.060066	0.032038	0.014588	0.893308
0.00593	0.971016	0.019862	0.003191
0.0	0.974273	0.025727	0.0
0.160102	0.595991	0.0	0.243907
0.036463	0.031251	0.91492	0.017365
0.006754	0.743647	0.244048	0.005552
0.020342	0.943817	0.028262	0.007579

MOTIF	Midbrain_E12.5_H3K4me3_58_76_0.600_1.110747e-312
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.725963	0.048522	0.114777	0.110739
0.010345	0.030206	0.850587	0.108862
0.07162	0.067303	0.0	0.861077
0.026191	0.960256	0.013552	0.0
0.003221	0.967621	0.029159	0.0
0.178112	0.796065	0.0	0.025823
0.111142	0.026134	0.842413	0.020312
0.0	0.633703	0.365806	0.000491
0.02223	0.894147	0.0	0.083624

MOTIF	Neural-Tube_E12.5_H3K4me3_59_90_0.588_2.779308e-217
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.785471	0.094655	0.079904	0.03997
0.010018	0.073821	0.8806	0.035561
0.063845	0.0397	0.031726	0.86473
0.048323	0.873566	0.033075	0.045037
0.0	0.962954	0.035593	0.001453
0.175058	0.649339	0.028365	0.147238
0.115709	0.01278	0.849638	0.021873
0.092239	0.79776	0.093547	0.016455
0.021874	0.773918	0.028018	0.17619

MOTIF	Liver_E12.5_H3K4me3_71_110_0.554_9.360009e-128
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.024404	0.100062	0.849747	0.025786
0.056389	0.058732	0.881451	0.003428
0.034133	0.599189	0.013266	0.353412
0.172552	0.031672	0.795776	0.0
0.015735	0.006254	0.973713	0.004298
0.022823	0.016413	0.960764	0.0
0.846152	0.019268	0.0	0.13458
0.843521	0.058646	0.093168	0.004665
0.266058	0.437631	0.069101	0.22721

MOTIF	Liver_E12.5_H3K4me3_77_97_0.542_9.5401e-90
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.646702	0.089721	0.091611	0.171966
0.0	0.123877	0.876123	0.0
0.019072	0.044593	0.928822	0.007513
0.112044	0.839865	0.013391	0.034699
0.252799	0.022622	0.724579	0.0
0.006931	0.0	0.993069	0.0
0.0776	0.01154	0.91086	0.0
0.97396	0.017274	0.0	0.008765
0.578725	0.421275	0.0	0.0

MOTIF	Cranio-Facial_E11.5_H3K9ac_58_51_0.563_3.92804e-125
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.079877	0.047872	0.86118	0.011072
0.008474	0.176162	0.801811	0.013553
0.12899	0.817778	0.020439	0.032793
0.17767	0.011562	0.777462	0.033306
0.020912	0.009933	0.910966	0.058189
0.068031	0.008678	0.875734	0.047557
0.906381	0.027478	0.01461	0.051531
0.22827	0.655083	0.088405	0.028242
0.121107	0.733644	0.0	0.145249

MOTIF	Hindbrain_E12.5_H3K9ac_54_26_0.564_2.875782e-307
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.162386	0.150348	0.629124	0.058142
0.11311	0.08968	0.762241	0.034969
0.012577	0.29286	0.691423	0.00314
0.079779	0.791887	0.008321	0.120014
0.043351	0.022803	0.806174	0.127673
0.021535	0.030191	0.881823	0.066451
0.011369	0.030997	0.941028	0.016607
0.875342	0.073026	0.017064	0.034569
0.099207	0.773726	0.12662	0.000448

MOTIF	Intestine_E14.5_H3K9ac_28_20_0.629_2.850759e-321
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.11719	0.14544	0.6626	0.07477
0.037808	0.20151	0.654178	0.106504
0.049063	0.061393	0.869484	0.02006
0.032593	0.854255	0.017922	0.09523
0.026841	0.037414	0.813106	0.122639
0.015502	0.130097	0.761927	0.092474
0.014903	0.030596	0.912639	0.041861
0.831727	0.108336	0.038136	0.021801
0.087028	0.796821	0.114646	0.001505
0.16876	0.62992	0.014389	0.186931

MOTIF	Limb_E15.5_H3K9ac_72_107_0.530_3.112084e-37
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.151793	0.046989	0.498205	0.303014
0.032643	0.05317	0.902372	0.011815
0.038359	0.865038	0.01159	0.085013
0.248536	0.012605	0.705667	0.033192
0.0	0.037421	0.873584	0.088995
0.0	0.016447	0.853523	0.130031
0.923568	0.027325	0.018367	0.03074
0.045502	0.893008	0.061491	0.0
0.787221	0.122555	0.0	0.090224

MOTIF	Lung_P0_H3K9ac_67_125_0.535_1.980069e-20
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.787201	0.0	0.052006	0.160794
0.032605	0.050559	0.781847	0.134989
0.035546	0.0	0.019783	0.944671
0.007544	0.955293	0.010478	0.026685
0.006359	0.937203	0.037581	0.018856
0.020448	0.739534	0.014297	0.225721
0.023806	0.031917	0.56716	0.377117
0.088286	0.838282	0.064311	0.009121
0.0	0.895076	0.08325	0.021674

MOTIF	Neural-Tube_E11.5_H3K9ac_74_73_0.550_7.954993e-127
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.588433	0.0	0.069784	0.341783
0.008241	0.0	0.91296	0.078799
0.066578	0.025956	0.050001	0.857466
0.008458	0.962608	0.01892	0.010015
0.007571	0.962444	0.010194	0.019791
0.014914	0.824039	0.0	0.161048
0.114375	0.018207	0.832084	0.035334
0.087042	0.646613	0.246002	0.020343
0.037908	0.711266	0.206762	0.044065