MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Liver_E12.5_H3K4me3_99_83_0.502_6.211807e-14 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.853622 0.146378 0.0 0.0 0.0 0.979559 0.020441 0.0 0.880864 0.045566 0.055803 0.017767 0.0 0.006215 0.993785 0.0 0.021851 0.857304 0.089916 0.030929 0.0 0.103084 0.879709 0.017207 0.431854 0.0 0.568146 0.0 0.0 0.806866 0.040409 0.152725 0.837968 0.017795 0.018102 0.126135 MOTIF Midbrain_E15.5_H3K4me3_86_127_0.554_3.051623e-127 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.615739 0.384261 0.0 0.0 0.0 0.979381 0.020619 0.0 0.860079 0.0 0.08698 0.052941 0.0 0.036842 0.963158 0.0 0.005445 0.940147 0.019916 0.034493 0.0 0.0 0.643578 0.356422 0.324408 0.0 0.635667 0.039925 0.052074 0.836634 0.056868 0.054424 MOTIF Heart_E11.5_H3K4me3_78_78_0.514_3.117359e-18 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.08782 0.380259 0.318228 0.213693 0.016509 0.888533 0.054472 0.040486 0.153277 0.631511 0.03742 0.177792 0.124751 0.02642 0.804209 0.044621 0.0 0.927367 0.072633 0.0 0.027923 0.022462 0.042131 0.907484 0.0 0.104691 0.827369 0.06794 0.167266 0.052911 0.018032 0.761791 0.059385 0.906065 0.026531 0.008019 0.043169 0.799593 0.138497 0.018742 MOTIF Neural-Tube_E12.5_H3K4me3_79_87_0.523_7.464259e-62 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.023946 0.356207 0.476408 0.143438 0.004304 0.106685 0.884137 0.004874 0.856798 0.072854 0.030917 0.039431 0.01097 0.950977 0.038052 0.0 0.90701 0.041987 0.0 0.051003 0.012493 0.024985 0.958056 0.004466 0.2358 0.756517 0.004079 0.003603 0.023861 0.066726 0.758605 0.150809 0.060805 0.03864 0.876235 0.02432 MOTIF Hindbrain_E15.5_H3K4me3_77_83_0.572_5.84477e-140 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.003297 0.083697 0.849983 0.063023 0.771578 0.100329 0.044628 0.083465 0.024662 0.940554 0.034785 0.0 0.872406 0.063592 0.019558 0.044443 0.0 0.035509 0.964491 0.0 0.023486 0.797824 0.04958 0.12911 0.033849 0.045733 0.724593 0.195825 0.063601 0.029737 0.721744 0.184918 0.037097 0.610405 0.072231 0.280267 0.0 0.0 0.530264 0.469736 MOTIF Intestine_E14.5_H3K4me3_85_103_0.526_3.583257e-32 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.0 0.971625 0.028375 0.701501 0.071484 0.0 0.227015 0.009108 0.839284 0.151607 0.0 0.945794 0.021372 0.0 0.032834 0.0 0.027224 0.972776 0.0 0.063154 0.645022 0.0 0.291824 0.020983 0.045558 0.906299 0.027159 0.023445 0.032872 0.938022 0.005662 0.011388 0.848682 0.139929 0.0 MOTIF Midbrain_P0_H3K4me3_82_92_0.516_2.067046e-31 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.006919 0.088226 0.900961 0.003894 0.861825 0.065016 0.024908 0.048252 0.012893 0.9613 0.022678 0.003129 0.937947 0.029279 0.016826 0.015948 0.0 0.014794 0.983398 0.001808 0.051748 0.7602 0.047092 0.14096 0.029627 0.031247 0.914659 0.024467 0.266716 0.250014 0.288886 0.194384 0.018237 0.861951 0.032981 0.086831 0.404142 0.360215 0.028444 0.207199 MOTIF Cranio-Facial_E15.5_H3K4me3_77_82_0.554_5.8218e-90 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.008286 0.045638 0.847133 0.098942 0.787084 0.091706 0.033169 0.088041 0.020654 0.950477 0.028869 0.0 0.904665 0.033633 0.037897 0.023805 0.003424 0.038567 0.958009 0.0 0.132242 0.770415 0.022165 0.075178 0.027185 0.052432 0.779476 0.140907 0.298883 0.037328 0.658514 0.005275 0.115362 0.802582 0.055982 0.026074 0.188264 0.222363 0.343452 0.245922 MOTIF Hindbrain_E16.5_H3K4me3_85_99_0.542_5.747902e-100 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.02519 0.95726 0.01755 0.745892 0.071942 0.052287 0.129879 0.019688 0.948337 0.031976 0.0 0.893322 0.061716 0.035216 0.009746 0.029 0.042966 0.928034 0.0 0.224867 0.720101 0.037742 0.01729 0.037861 0.072008 0.867089 0.023042 0.264424 0.046028 0.491835 0.197713 0.030953 0.886747 0.012093 0.070207 MOTIF Neural-Tube_E11.5_H3K4me3_88_99_0.536_1.548593e-46 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.015575 0.04942 0.910603 0.024402 0.86384 0.069592 0.018496 0.048073 0.044729 0.897987 0.057284 0.0 0.823664 0.09433 0.049745 0.032262 0.019866 0.20659 0.773544 0.0 0.246002 0.643405 0.037577 0.073016 0.028904 0.022889 0.845784 0.102423 0.193118 0.03196 0.699997 0.074925 0.058749 0.798432 0.039929 0.10289 MOTIF Forebrain_E14.5_H3K4me3_69_63_0.576_2.98844e-139 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.009811 0.073323 0.908111 0.008755 0.912526 0.025002 0.033361 0.02911 0.00761 0.96002 0.027628 0.004742 0.887985 0.065486 0.035177 0.011352 0.0 0.040065 0.958915 0.00102 0.018902 0.801887 0.042845 0.136366 0.021299 0.036404 0.862585 0.079712 0.271052 0.069874 0.445675 0.213399 0.083536 0.75599 0.069296 0.091178 0.239646 0.274615 0.33239 0.153349 MOTIF Limb_E11.5_H3K4me3_72_55_0.559_8.257692e-72 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.003426 0.070771 0.916809 0.008993 0.900185 0.006287 0.025777 0.06775 0.005165 0.959994 0.033431 0.001411 0.810736 0.036114 0.047888 0.105261 0.002997 0.126595 0.867977 0.002431 0.044936 0.790384 0.045259 0.119421 0.023185 0.045301 0.877701 0.053813 0.268664 0.059648 0.493534 0.178154 0.057076 0.810457 0.041482 0.090984 0.220636 0.246365 0.227276 0.305722 MOTIF Neural-Tube_E15.5_H3K4me3_60_77_0.581_2.904682e-156 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.011703 0.053188 0.931021 0.004089 0.834468 0.027791 0.112295 0.025445 0.016237 0.930784 0.052978 0.0 0.886063 0.045831 0.028739 0.039366 0.0 0.038116 0.961884 0.0 0.004196 0.857957 0.047336 0.09051 0.020185 0.014425 0.767032 0.198357 0.270051 0.071196 0.467547 0.191207 0.012378 0.709779 0.18471 0.093133 0.282938 0.113343 0.342788 0.260931 MOTIF Heart_E12.5_H3K4me3_92_104_0.504_1.907605e-33 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.023857 0.60382 0.080361 0.291962 0.152055 0.637931 0.030735 0.179278 0.147493 0.044468 0.778633 0.029406 0.0 0.921006 0.077484 0.00151 0.036306 0.047219 0.051209 0.865266 0.0 0.041308 0.894827 0.063865 0.02123 0.010429 0.049583 0.918757 0.007444 0.944955 0.043987 0.003614 0.180802 0.578521 0.018715 0.221962 MOTIF Lung_E14.5_H3K4me3_81_78_0.557_1.151831e-89 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.009266 0.054775 0.92634 0.009619 0.880545 0.033009 0.025171 0.061274 0.024551 0.875843 0.098145 0.001461 0.918932 0.027011 0.02634 0.027717 0.0 0.062325 0.937675 0.0 0.039913 0.714215 0.040223 0.205648 0.034097 0.022785 0.781378 0.16174 0.226881 0.043936 0.696313 0.032871 0.121375 0.605965 0.208317 0.064343 0.202092 0.141444 0.656464 0.0 MOTIF Stomach_P0_H3K4me3_88_90_0.546_1.336694e-67 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.028997 0.05905 0.901485 0.010469 0.873351 0.039625 0.063833 0.023191 0.037768 0.926754 0.035477 0.0 0.83333 0.064147 0.02874 0.073783 0.003705 0.129538 0.864186 0.002571 0.009733 0.81025 0.04228 0.137738 0.118824 0.033974 0.682425 0.164777 0.24549 0.039646 0.576491 0.138373 0.128537 0.78811 0.053314 0.030038 MOTIF Hindbrain_E12.5_H3K4me2_21_29_0.640_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.282643 0.317756 0.04682 0.352781 0.0 0.938144 0.061856 0.0 0.98538 0.0 0.0 0.01462 0.004527 0.068605 0.926868 0.0 0.055629 0.873509 0.030509 0.040353 0.0 0.008734 0.98123 0.010036 0.346411 0.068987 0.517557 0.067044 0.0 0.96679 0.0 0.03321 0.0 0.0 0.910103 0.089897 MOTIF Stomach_E16.5_H3K4me2_52_56_0.576_7.656781e-313 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.083932 0.015031 0.901037 0.0 0.441002 0.258407 0.023915 0.276677 0.013502 0.885124 0.101374 0.0 0.846127 0.046465 0.052512 0.054897 0.0 0.074964 0.925036 0.0 0.050007 0.905464 0.016858 0.027671 0.021485 0.021794 0.923632 0.033088 0.223274 0.061353 0.677212 0.038161 0.016588 0.935372 0.013976 0.034064 MOTIF Cranio-Facial_E14.5_H3K9ac_84_77_0.517_1.49318e-28 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.329808 0.05482 0.291635 0.323737 0.022984 0.049819 0.914148 0.013049 0.836604 0.061074 0.056094 0.046229 0.019991 0.946948 0.033061 0.0 0.869427 0.050026 0.02418 0.056366 0.005787 0.039399 0.952993 0.001821 0.322884 0.493709 0.036021 0.147386 0.038962 0.021166 0.797674 0.142198 0.025779 0.030184 0.767158 0.176878 0.025972 0.925315 0.019558 0.029155 0.018267 0.400454 0.219086 0.362193 MOTIF Hindbrain_E12.5_H3K9ac_68_73_0.546_1.405499e-121 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.017784 0.958874 0.023343 0.763338 0.041059 0.079601 0.116003 0.0 1.0 0.0 0.0 0.931166 0.066327 0.0 0.002507 0.0 0.026981 0.969796 0.003222 0.093807 0.824665 0.047024 0.034504 0.047926 0.030839 0.910091 0.011143 0.062319 0.232852 0.459276 0.245553 0.154914 0.745366 0.036343 0.063377 MOTIF Hindbrain_E14.5_H3K9ac_65_72_0.553_4.733291e-87 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.027085 0.033548 0.890957 0.04841 0.531354 0.327486 0.0 0.14116 0.0 0.949497 0.050503 0.0 0.956124 0.0 0.0 0.043876 0.0 0.084227 0.915773 0.0 0.100812 0.850574 0.0 0.048614 0.0 0.020346 0.95413 0.025523 0.195451 0.016471 0.62562 0.162458 0.02002 0.918781 0.035405 0.025794 MOTIF Hindbrain_E13.5_H3K9ac_60_75_0.549_8.739183e-74 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.092477 0.859492 0.0 0.04803 0.065468 0.886528 0.008338 0.039665 0.373635 0.065543 0.532308 0.028513 0.001099 0.900816 0.077126 0.02096 0.0 0.009954 0.048456 0.94159 0.0 0.007179 0.796461 0.19636 0.021702 0.073084 0.0 0.905214 0.203515 0.717885 0.0786 0.0 0.267806 0.716884 0.0 0.01531 0.0 0.0 1.0 0.0 MOTIF Heart_E12.5_H3K9ac_69_72_0.525_1.724109e-22 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.030483 0.323231 0.393875 0.252411 0.045125 0.627872 0.041841 0.285162 0.018169 0.899228 0.034485 0.048118 0.323012 0.023682 0.653307 0.0 0.0 0.900458 0.099542 0.0 0.027361 0.047955 0.093609 0.831075 0.0 0.022731 0.916507 0.060763 0.004159 0.0 0.020773 0.975068 0.053797 0.83067 0.077113 0.038421 0.11777 0.617261 0.0 0.264969 MOTIF Lung_E14.5_H3K9ac_65_69_0.545_8.435005e-58 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.081455 0.696557 0.114177 0.10781 0.134882 0.660021 0.109948 0.095149 0.110508 0.027641 0.820115 0.041735 0.001291 0.920223 0.076737 0.001748 0.043085 0.034498 0.05561 0.866807 0.001684 0.058988 0.893328 0.046 0.027899 0.0 0.050822 0.921279 0.010324 0.79749 0.187701 0.004486 0.18217 0.606195 0.049005 0.16263 0.320771 0.090917 0.535001 0.053311