MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Limb_E13.5_H3K9me3_26_175_0.534_4.651521e-61 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.262 0.144 0.593 0.001 0.843 0.001 0.153 0.003 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 MOTIF Liver_P0_H3K9me3_65_182_0.517_2.851214e-08 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.031 0.001 0.967 0.001 0.042 0.956 0.001 0.001 0.17 0.828 0.001 MOTIF Cranio-Facial_E12.5_H3K9me3_58_178_0.517_1.957569e-10 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.1 0.1 0.1 0.7 0.1 0.1 0.1 0.7 0.1 0.7 0.1 0.1 0.1 0.1 0.1 0.7 0.1 0.1 0.1 0.7 0.1 0.1 0.1 0.7 0.1 0.1 0.7 0.1 0.1 0.1 0.7 0.1 MOTIF Heart_E14.5_H3K9me3_66_180_0.521_4.854195e-18 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.1 0.1 0.1 0.7 0.1 0.1 0.1 0.7 0.1 0.7 0.1 0.1 0.1 0.1 0.1 0.7 0.1 0.1 0.1 0.7 0.1 0.1 0.1 0.7 0.1 0.1 0.7 0.1 0.1 0.1 0.7 0.1 MOTIF Heart_P0_H3K9me3_61_100_0.521_4.512947e-14 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.052762 0.820653 0.046528 0.080056 0.060301 0.700304 0.238273 0.001122 0.90197 0.046796 0.041455 0.009778 0.754888 0.062483 0.068481 0.114148 0.916766 0.001455 0.078522 0.003257 0.017744 0.021565 0.927554 0.033137 0.924472 0.003668 0.060493 0.011366 0.900133 0.020107 0.074706 0.005054 0.076779 0.699714 0.017206 0.2063 0.519409 0.0 0.241605 0.238986 MOTIF Cranio-Facial_E13.5_H3K9me3_45_131_0.524_6.780306e-18 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.012584 0.864844 0.118596 0.003977 0.020425 0.933989 0.040873 0.004712 0.783543 0.064034 0.134357 0.018065 0.709364 0.162804 0.102937 0.024895 0.895056 0.004054 0.09689 0.004 0.050175 0.004525 0.932529 0.012771 0.8402 0.050473 0.065247 0.044079 0.822899 0.124484 0.042403 0.010214 0.090421 0.64677 0.017371 0.245439 0.590266 0.223364 0.066241 0.120129 MOTIF Cranio-Facial_E15.5_H3K9me3_4_121_0.533_6.715721e-12 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.064877 0.889785 0.037068 0.008269 0.008511 0.897951 0.077986 0.015552 0.939634 0.043247 0.012734 0.004386 0.768837 0.043787 0.144025 0.04335 0.843721 0.00775 0.146839 0.00169 0.005441 0.015552 0.977688 0.001319 0.779592 0.149361 0.064997 0.006049 0.73279 0.227637 0.039573 0.0 0.178163 0.48492 0.0 0.336916 MOTIF Cranio-Facial_E14.5_H3K9me3_44_134_0.523_1.216099e-27 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.017778 0.948629 0.033594 0.0 0.032577 0.957237 0.00506 0.005126 0.903664 0.038684 0.011492 0.04616 0.754688 0.137511 0.080835 0.026966 0.805647 0.002271 0.192082 0.0 0.02396 0.021642 0.884816 0.069582 0.882396 0.047863 0.028795 0.040946 0.897919 0.098512 0.0 0.003569 0.233348 0.599856 0.013959 0.152837 MOTIF Intestine_E14.5_H3K9me3_66_132_0.519_2.98735e-07 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.011665 0.960034 0.017423 0.010878 0.061601 0.881274 0.055448 0.001678 0.968185 0.019762 0.012053 0.0 0.67354 0.181226 0.133353 0.01188 0.882956 0.001889 0.104528 0.010627 0.006761 0.000552 0.937315 0.055373 0.895038 0.017959 0.052221 0.034782 0.848576 0.113389 0.034843 0.003192 0.127616 0.542501 0.035948 0.293935 0.411878 0.014265 0.420562 0.153295 MOTIF Kidney_E16.5_H3K9me3_64_147_0.520_2.359374e-21 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.927147 0.072853 0.0 0.003593 0.885378 0.111029 0.0 0.895773 0.009055 0.062867 0.032305 0.799922 0.072249 0.105306 0.022523 0.950288 0.007383 0.039699 0.002629 0.000673 0.005237 0.893204 0.100887 0.830169 0.066782 0.074436 0.028613 0.891747 0.097267 0.0 0.010985 0.335909 0.450418 0.0 0.213674 MOTIF Lung_E16.5_H3K9me3_41_129_0.533_1.585493e-19 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.00335 0.913117 0.083533 0.0 0.011057 0.978153 0.008151 0.002639 0.869345 0.025878 0.016748 0.088029 0.775097 0.068702 0.143166 0.013036 0.953371 0.004428 0.038168 0.004033 0.0 0.0 0.954451 0.045549 0.780222 0.028764 0.126839 0.064175 0.820383 0.153964 0.002302 0.023351 0.21484 0.626246 0.01465 0.144264 MOTIF Lung_P0_H3K9me3_14_120_0.531_4.562311e-06 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.038099 0.881851 0.051165 0.028885 0.013282 0.890144 0.090274 0.0063 0.927221 0.046478 0.013086 0.013215 0.695927 0.17714 0.025399 0.101535 0.948413 0.003705 0.021956 0.025926 0.014685 0.059726 0.900688 0.024901 0.586487 0.177052 0.122046 0.114415 0.738475 0.091189 0.025226 0.145109 0.161423 0.766961 0.041683 0.029933 MOTIF Hindbrain_E16.5_H3K9me3_31_124_0.528_1.369873e-22 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.030089 0.948564 0.014416 0.006932 0.011929 0.982746 0.005325 0.0 0.909597 0.058402 0.023666 0.008335 0.602764 0.204048 0.068447 0.124741 0.885959 0.00777 0.082392 0.023879 0.017392 0.024386 0.877549 0.080673 0.873551 0.031612 0.070465 0.024373 0.721519 0.107443 0.157598 0.01344 0.030461 0.656453 0.044003 0.269084 0.219505 0.442639 0.166042 0.171814 MOTIF Forebrain_P0_H3K9me3_28_129_0.528_4.492281e-09 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.062884 0.824509 0.076365 0.036242 0.030445 0.878773 0.085208 0.005574 0.845831 0.131362 0.004257 0.018549 0.693315 0.15283 0.099337 0.054518 0.877685 0.019901 0.072362 0.030052 0.018396 0.043436 0.836502 0.101666 0.815681 0.007649 0.143899 0.032771 0.807909 0.119213 0.049183 0.023695 0.075935 0.716116 0.172912 0.035037 MOTIF Heart_E15.5_H3K9me3_23_140_0.528_1.83287e-07 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.063102 0.807443 0.056445 0.07301 0.014708 0.895229 0.079261 0.010802 0.807613 0.156785 0.009842 0.02576 0.738477 0.121627 0.02283 0.117066 0.907265 0.007067 0.071323 0.014346 0.005717 0.013585 0.923539 0.057159 0.811512 0.025837 0.143444 0.019207 0.769913 0.159162 0.051533 0.019392 0.163251 0.60672 0.055628 0.174401 MOTIF Hindbrain_P0_H3K9me3_60_108_0.517_1.000572e-06 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.00135 0.962379 0.033639 0.002632 0.056174 0.943826 0.0 0.0 0.78817 0.059803 0.052189 0.099838 0.732761 0.158071 0.065519 0.043649 0.861803 0.031658 0.093888 0.012651 0.061989 0.03306 0.808722 0.09623 0.902417 0.00101 0.07222 0.024353 0.657174 0.194275 0.111491 0.037061 0.1422 0.799529 0.045198 0.013073 MOTIF Midbrain_P0_H3K9me3_25_139_0.530_3.290111e-10 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.014551 0.94709 0.028594 0.009764 0.0 0.975817 0.009251 0.014932 0.816307 0.108092 0.007266 0.068335 0.8567 0.08222 0.012077 0.049002 0.880698 0.001726 0.102293 0.015283 0.009651 0.036445 0.785543 0.168361 0.941588 0.002706 0.010354 0.045351 0.603071 0.205868 0.10738 0.08368 0.199653 0.59428 0.034634 0.171434 MOTIF Stomach_E16.5_H3K9me3_50_138_0.525_9.037856e-19 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.077108 0.835601 0.018149 0.069141 0.011723 0.736412 0.251865 0.0 0.906162 0.034514 0.044658 0.014666 0.844957 0.051814 0.047031 0.056198 0.965748 0.000917 0.033335 0.0 0.003341 0.0 0.945428 0.051231 0.894947 0.019325 0.024164 0.061565 0.868814 0.079382 0.050787 0.001018 0.160749 0.643566 0.001722 0.193963 0.057987 0.297735 0.042563 0.601715 MOTIF Heart_P0_H3K9me3_39_165_0.524_1.075373e-36 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.909 0.006 0.042 0.043 0.149 0.011 0.788 0.052 0.028 0.034 0.017 0.921 0.05 0.025 0.011 0.914 0.039 0.847 0.033 0.081 0.036 0.034 0.017 0.913 0.02 0.028 0.022 0.93 0.056 0.011 0.028 0.905 0.059 0.011 0.919 0.011 0.135 0.017 0.813 0.035 0.094 0.318 0.229 0.359 0.133 0.036 0.825 0.006 MOTIF Intestine_E14.5_H3K9me3_86_164_0.513_9.530122e-13 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.787 0.059 0.11 0.044 0.078 0.001 0.892 0.029 0.001 0.014 0.029 0.956 0.064 0.062 0.015 0.859 0.039 0.859 0.015 0.087 0.044 0.007 0.001 0.948 0.015 0.044 0.044 0.897 0.078 0.029 0.045 0.848 0.076 0.001 0.874 0.049 0.029 0.015 0.927 0.029 0.058 0.309 0.144 0.489 0.04 0.015 0.848 0.097 MOTIF Hindbrain_P0_H3K9me3_22_177_0.525_5.328351e-13 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.89 0.001 0.001 0.108 0.997 0.001 0.001 0.001 0.935 0.001 0.001 0.063 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.018 0.98 MOTIF Heart_E13.5_H3K9me3_89_176_0.520_9.506503e-30 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.955 0.043 0.001 0.001 0.096 0.001 0.902 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 MOTIF Stomach_E14.5_H3K9me3_47_171_0.518_5.45603e-12 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.001 0.997 0.001 0.001 0.001 0.96 0.038 0.001 0.882 0.001 0.001 0.116 0.961 0.001 0.001 0.037 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.866 0.001 0.132 0.001 0.001 0.001 0.997 MOTIF Limb_E15.5_H3K9me3_15_164_0.523_4.98373e-05 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.961 0.001 0.037 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.877 0.001 0.001 0.121 0.997 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.024 0.974 MOTIF Stomach_P0_H3K9me3_40_168_0.520_5.419181e-07 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.001 0.997 0.001 0.001 0.001 0.968 0.03 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.957 0.041 0.001 0.001 0.001 0.001 0.997 0.001 0.86 0.001 0.07 0.069 0.936 0.062 0.001 0.001 0.001 0.898 0.001 0.1 0.001 0.001 0.001 0.997