MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Hindbrain_E14.5_H3K27me3_39_61_0.518_3.932793e-10 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.597252 0.0 0.281326 0.121423 0.0 0.997976 0.0 0.002024 0.733717 0.023881 0.020909 0.221492 0.0 0.06458 0.908742 0.026678 0.0 0.990993 0.009007 0.0 0.031373 0.015038 0.037574 0.916015 0.167602 0.603968 0.096942 0.131488 0.045981 0.622191 0.247214 0.084615 0.0 0.128865 0.871135 0.0 0.073494 0.0 0.893392 0.033114 MOTIF Hindbrain_P0_H3K27me3_24_40_0.525_6.033234e-11 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.834868 0.0 0.165132 0.0 0.005199 0.948949 0.033227 0.012625 0.887075 0.010799 0.070995 0.031131 0.004005 0.021966 0.955711 0.018318 0.005718 0.968118 0.026164 0.0 0.084699 0.017569 0.131171 0.766561 0.34632 0.519739 0.039424 0.094517 0.06461 0.871692 0.036179 0.02752 0.057898 0.0 0.936661 0.00544 MOTIF Kidney_P0_H3K4me1_67_127_0.512_4.084856e-17 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.019231 0.070958 0.856216 0.053595 0.067133 0.0 0.799328 0.133539 0.854135 0.040526 0.082807 0.022533 0.029052 0.029755 0.928395 0.012798 0.03336 0.94317 0.02347 0.0 0.024279 0.015145 0.008647 0.951929 0.005976 0.02216 0.96609 0.005775 0.094584 0.317083 0.0 0.588333 0.011793 0.844849 0.125779 0.017578 MOTIF Lung_P0_H3K4me1_86_91_0.506_1.72226e-09 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.007066 0.882733 0.090754 0.019448 0.872538 0.0 0.067771 0.05969 0.003686 0.898927 0.017435 0.079951 0.566929 0.005467 0.335241 0.092363 0.004632 0.06459 0.897742 0.033036 0.019345 0.556314 0.214415 0.209926 0.030417 0.06575 0.02427 0.879563 0.011364 0.945429 0.0 0.043207 0.077596 0.866589 0.009926 0.045889 0.026769 0.290261 0.354024 0.328946 MOTIF Hindbrain_E14.5_H3K4me1_61_101_0.516_1.414934e-24 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.761834 0.076339 0.123439 0.038388 0.007819 0.976902 0.015279 0.0 0.875144 0.030604 0.05195 0.042302 0.0 0.026806 0.760154 0.21304 0.020039 0.838572 0.009564 0.131824 0.0179 0.046166 0.18151 0.754424 0.043305 0.923726 0.017189 0.01578 0.111645 0.832026 0.051407 0.004922 0.113013 0.316752 0.025001 0.545235 0.034993 0.04055 0.426021 0.498437 MOTIF Neural-Tube_E11.5_H3K4me1_48_72_0.521_3.504506e-23 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.165109 0.629149 0.205742 0.0 0.730153 0.032179 0.20752 0.030149 0.006154 0.980076 0.008468 0.005302 0.924803 0.0241 0.043028 0.008069 0.0 0.046413 0.814642 0.138945 0.009912 0.790854 0.010279 0.188954 0.033499 0.076641 0.061666 0.828195 0.100722 0.848244 0.034768 0.016265 0.041199 0.790643 0.128833 0.039324 0.131225 0.113739 0.18117 0.573866 MOTIF Limb_E11.5_H3K4me2_81_130_0.525_5.236707e-29 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.612735 0.114436 0.12725 0.145578 0.254688 0.022212 0.7231 0.0 0.0 0.983036 0.016964 0.0 0.870691 0.0 0.113982 0.015327 0.002016 0.005665 0.646816 0.345503 0.0 0.982538 0.002411 0.015051 0.00829 0.185317 0.018928 0.787466 0.058469 0.921081 0.020449 0.0 0.0 0.834922 0.11431 0.050768 MOTIF Limb_E15.5_H3K4me2_84_115_0.528_2.621283e-66 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.628593 0.117081 0.163395 0.090932 0.246878 0.0 0.738264 0.014858 0.0 1.0 0.0 0.0 0.902436 0.052056 0.025945 0.019563 0.0 0.00248 0.99752 0.0 0.009282 0.960839 0.011359 0.01852 0.041417 0.172173 0.055414 0.730996 0.074847 0.781044 0.044307 0.099801 0.162563 0.603737 0.085535 0.148165 MOTIF Lung_E16.5_H3K4me2_91_124_0.521_9.102101e-39 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.018014 0.0 0.888228 0.093758 0.199614 0.07585 0.708233 0.016303 0.827205 0.0 0.136085 0.03671 0.022397 0.0 0.974357 0.003246 0.0 0.977811 0.018538 0.003651 0.026194 0.086085 0.031239 0.856482 0.0 0.0 1.0 0.0 0.014814 0.476103 0.036031 0.473052 0.034953 0.725625 0.065631 0.173791 MOTIF Heart_E16.5_H3K4me2_70_48_0.528_5.612969e-61 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.032617 0.739976 0.207751 0.019656 0.077142 0.154381 0.697017 0.07146 0.0 0.779425 0.185257 0.035318 0.851425 0.067551 0.031567 0.049458 0.003703 0.017479 0.861148 0.11767 0.005529 0.913162 0.0 0.081309 0.021249 0.041811 0.052291 0.884648 0.032554 0.871152 0.049106 0.047189 0.199951 0.629412 0.0 0.170637 MOTIF Hindbrain_E11.5_H3K4me2_73_51_0.563_4.901783e-139 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.011158 0.796479 0.170263 0.0221 0.176029 0.103514 0.671415 0.049043 0.008753 0.778129 0.17954 0.033578 0.862787 0.070067 0.011684 0.055462 0.002951 0.003216 0.905093 0.088741 0.079914 0.880459 0.021821 0.017806 0.031274 0.007449 0.093116 0.868162 0.021482 0.871743 0.071181 0.035594 0.029444 0.676264 0.020303 0.273989 0.060122 0.296787 0.565067 0.078025 MOTIF Cranio-Facial_E13.5_H3K4me2_67_53_0.547_3.670665e-103 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.015535 0.0 0.560254 0.424211 0.107759 0.818114 0.038435 0.035691 0.135128 0.086242 0.732925 0.045704 0.0 0.983744 0.013171 0.003085 0.797994 0.02576 0.077825 0.098421 0.0 0.013463 0.811941 0.174595 0.078849 0.759332 0.022115 0.139705 0.073276 0.040057 0.05875 0.827917 0.007378 0.830757 0.034319 0.127546 0.113626 0.746872 0.025246 0.114256 MOTIF Cranio-Facial_E12.5_H3K4me2_62_50_0.556_3.199299e-314 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.038588 0.812827 0.122574 0.026011 0.136446 0.104352 0.694759 0.064444 0.001862 0.978674 0.015987 0.003478 0.746696 0.049418 0.083394 0.120492 0.001881 0.013341 0.86452 0.120259 0.071324 0.728798 0.135657 0.06422 0.04477 0.060215 0.100388 0.794627 0.032787 0.884581 0.026087 0.056544 0.050431 0.701899 0.01574 0.231931 MOTIF Hindbrain_E12.5_H3K4me2_80_47_0.542_1.099279e-68 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.050202 0.868233 0.052537 0.029028 0.180573 0.096152 0.653042 0.070233 0.002559 0.952571 0.019868 0.025002 0.707056 0.034118 0.058453 0.200373 0.0 0.011 0.84822 0.140779 0.034806 0.777319 0.086661 0.101215 0.054041 0.046016 0.038819 0.861124 0.034426 0.867068 0.037857 0.060648 0.021664 0.822685 0.013467 0.142185 0.237467 0.343023 0.14579 0.273719 MOTIF Midbrain_E13.5_H3K4me2_94_91_0.521_1.31045e-25 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.01968 0.748778 0.201694 0.029848 0.329502 0.106766 0.516922 0.04681 0.0 0.974091 0.025161 0.000748 0.881509 0.02421 0.028231 0.06605 0.006139 0.0 0.974162 0.019699 0.031404 0.898931 0.005028 0.064637 0.019345 0.089223 0.044808 0.846625 0.107278 0.807955 0.052285 0.032482 0.127714 0.63399 0.040033 0.198263 MOTIF Midbrain_E11.5_H3K4me2_70_42_0.572_1.256457e-158 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.050436 0.707171 0.074978 0.167415 0.130552 0.060145 0.759386 0.049917 0.0 0.96248 0.035085 0.002435 0.695869 0.056648 0.078715 0.168768 0.001611 0.026986 0.951637 0.019765 0.096705 0.744277 0.079603 0.079415 0.04173 0.078227 0.055176 0.824867 0.019651 0.851357 0.035733 0.093259 0.092302 0.780136 0.027819 0.099743 MOTIF Midbrain_E15.5_H3K4me2_85_83_0.531_1.380911e-55 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.124546 0.504871 0.243249 0.127334 0.190723 0.136876 0.628732 0.043668 0.0 0.956459 0.030747 0.012794 0.849659 0.034979 0.061904 0.053457 0.0 0.004597 0.977155 0.018249 0.0289 0.794582 0.100777 0.075741 0.059692 0.074858 0.082739 0.782711 0.011006 0.937603 0.021934 0.029456 0.13439 0.737541 0.035642 0.092428 MOTIF Midbrain_E16.5_H3K4me2_76_53_0.542_4.990408e-96 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.039367 0.87509 0.071317 0.014226 0.230747 0.045164 0.570827 0.153262 0.0 0.02999 0.968529 0.001481 0.847304 0.063246 0.025212 0.064238 0.01846 0.095422 0.878827 0.007291 0.125537 0.783084 0.091379 0.0 0.124524 0.037546 0.067937 0.769994 0.014952 0.01543 0.959304 0.010314 0.127369 0.505544 0.227125 0.139962 MOTIF Kidney_P0_H3K4me2_66_45_0.559_2.96176e-190 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.018892 0.809975 0.160792 0.010342 0.173394 0.063252 0.613149 0.150205 0.066814 0.036956 0.888621 0.00761 0.815802 0.099077 0.030629 0.054492 0.016247 0.020396 0.926989 0.036368 0.128037 0.757482 0.114235 0.000245 0.064343 0.037087 0.057157 0.841412 0.015372 0.026399 0.904264 0.053966 0.099909 0.632856 0.052457 0.214778 0.138813 0.211601 0.482858 0.166728 MOTIF Intestine_E15.5_H3K4me2_79_44_0.541_7.775608e-76 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.011602 0.830684 0.15024 0.007474 0.220894 0.049176 0.555741 0.17419 0.037124 0.048588 0.907174 0.007114 0.874497 0.046584 0.029785 0.049134 0.012826 0.006465 0.946959 0.033751 0.111684 0.877409 0.010907 0.0 0.119179 0.021184 0.083888 0.77575 0.045928 0.021024 0.873049 0.059999 0.058214 0.637536 0.098558 0.205692 0.245014 0.25768 0.448829 0.048477 MOTIF Cranio-Facial_E14.5_H3K4me2_70_48_0.548_1.011277e-197 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.007055 0.838574 0.13214 0.022231 0.219128 0.041195 0.526747 0.212929 0.073737 0.05777 0.865271 0.003222 0.794714 0.102625 0.05801 0.044652 0.016058 0.020609 0.923182 0.040151 0.119021 0.849331 0.030697 0.00095 0.067492 0.066861 0.057315 0.808332 0.031472 0.021908 0.911964 0.034656 0.117356 0.674506 0.046063 0.162075 MOTIF Stomach_E14.5_H3K4me2_81_52_0.545_9.531683e-82 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.004548 0.77318 0.212583 0.009688 0.268515 0.039927 0.504564 0.186994 0.060211 0.033989 0.900372 0.005428 0.838516 0.109634 0.010128 0.041722 0.008544 0.011166 0.971191 0.009098 0.11276 0.880014 0.003059 0.004168 0.158365 0.069459 0.053025 0.719152 0.010537 0.019389 0.964275 0.005799 0.132191 0.682881 0.064089 0.120839 MOTIF Forebrain_E13.5_H3K4me2_64_38_0.543_5.876212e-90 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.016785 0.953097 0.020646 0.009471 0.308005 0.125892 0.372417 0.193686 0.006225 0.063751 0.927764 0.00226 0.809567 0.058768 0.07142 0.060245 0.013752 0.010639 0.97091 0.0047 0.02006 0.926917 0.052059 0.000964 0.088422 0.032208 0.041147 0.838223 0.040476 0.013554 0.883149 0.062822 0.067633 0.699269 0.060246 0.172853 0.231907 0.174019 0.377717 0.216357 MOTIF Stomach_E16.5_H3K4me2_81_55_0.532_1.081322e-39 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.012169 0.921538 0.057514 0.008779 0.335717 0.034029 0.449715 0.180539 0.031997 0.042951 0.905079 0.019973 0.827397 0.093975 0.034121 0.044507 0.009642 0.010243 0.937437 0.042677 0.097719 0.886421 0.015232 0.000629 0.076555 0.060672 0.023051 0.839723 0.018289 0.003632 0.975449 0.002629 0.108748 0.539511 0.095289 0.256453 0.149792 0.200018 0.45774 0.19245 MOTIF Intestine_E15.5_H3K4me3_80_116_0.532_1.485905e-21 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.010403 0.29618 0.673495 0.019922 0.085034 0.05125 0.863716 0.0 0.819644 0.095971 0.0 0.084385 0.00573 0.0 0.990729 0.003542 0.021838 0.958906 0.016758 0.002498 0.013107 0.049828 0.028826 0.90824 0.0 0.038819 0.961181 0.0 0.205897 0.446185 0.015372 0.332546 0.067121 0.819677 0.051637 0.061565 0.295534 0.476445 0.156596 0.071424