MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Limb_E13.5_H3K4me3_62_43_0.603_1.498998e-310 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.276095 0.228754 0.122796 0.372354 0.031186 0.768074 0.078526 0.122214 0.033501 0.905521 0.010977 0.05 0.157291 0.026353 0.794724 0.021631 0.191591 0.035512 0.754688 0.018209 0.026784 0.05719 0.736767 0.179259 0.029056 0.021854 0.940815 0.008275 0.920351 0.048726 0.0 0.030923 0.044589 0.90112 0.043044 0.011247 0.115622 0.022285 0.655744 0.206348 MOTIF Liver_E11.5_H3K4me3_38_40_0.640_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.026936 0.871873 0.077489 0.023702 0.013764 0.943331 0.027319 0.015586 0.125839 0.004408 0.853788 0.015965 0.184862 0.033083 0.766995 0.015061 0.00697 0.270387 0.486439 0.236204 0.009388 0.003764 0.97953 0.007319 0.872272 0.02023 0.038419 0.06908 0.057682 0.737994 0.088977 0.115347 0.02095 0.073646 0.888251 0.017153 MOTIF Heart_E14.5_H3K4me3_77_75_0.553_1.116214e-126 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.073352 0.798089 0.103094 0.025465 0.087493 0.688698 0.079831 0.143979 0.01508 0.89506 0.036233 0.053627 0.138436 0.0 0.795149 0.066415 0.117078 0.028322 0.841159 0.013441 0.029805 0.008781 0.828886 0.132527 0.173901 0.034781 0.784642 0.006675 0.909153 0.028743 0.0 0.062103 0.1829 0.699131 0.037425 0.080545 MOTIF Lung_E14.5_H3K4me3_86_133_0.532_2.618742e-180 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.023046 0.468795 0.50816 0.0 0.0 0.851631 0.059628 0.088741 0.0 0.981342 0.0 0.018658 0.337069 0.050867 0.547477 0.064587 0.242478 0.0 0.757522 0.0 0.020748 0.0 0.979252 0.0 0.047022 0.0 0.932968 0.02001 0.977371 0.0 0.0 0.022629 MOTIF Cranio-Facial_E14.5_H3K4me2_35_22_0.591_4.038138e-311 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.032619 0.841271 0.044856 0.081255 0.009741 0.778577 0.007399 0.204283 0.027907 0.920864 0.0 0.051229 0.037598 0.862407 0.061048 0.038948 0.2817 0.080832 0.622953 0.014515 0.003107 0.012572 0.981149 0.003172 0.309966 0.663865 0.014282 0.011888 0.052382 0.017657 0.880479 0.049482 0.15064 0.047968 0.710475 0.090918 0.378631 0.621369 0.0 0.0 MOTIF Heart_E13.5_H3K4me2_32_31_0.579_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.021348 0.960834 0.0 0.017818 0.023321 0.834511 0.104688 0.037481 0.055064 0.911305 0.0 0.033631 0.0 0.810784 0.032734 0.156482 0.0 0.113757 0.886243 0.0 0.012273 0.0 0.977266 0.01046 0.054905 0.826066 0.0578 0.061229 0.0 0.0 1.0 0.0 0.499044 0.072726 0.370604 0.057627 MOTIF Limb_E13.5_H3K4me2_48_45_0.572_9.991262e-314 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0722 0.08141 0.0 0.846389 0.026602 0.875852 0.058468 0.039078 0.382665 0.598534 0.0 0.018801 0.047048 0.907994 0.029089 0.015869 0.037659 0.904026 0.045366 0.012949 0.382272 0.065767 0.479033 0.072928 0.037156 0.025272 0.834228 0.103344 0.090284 0.885114 0.024603 0.0 0.0 0.0 0.944065 0.055935 MOTIF Midbrain_E12.5_H3K4me2_64_39_0.566_7.865652e-297 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.0 0.0 1.0 0.0 1.0 0.0 0.0 0.236414 0.625045 0.091994 0.046547 0.053862 0.869943 0.0 0.076196 0.052315 0.800189 0.0 0.147495 0.033169 0.037867 0.899026 0.029939 0.00932 0.0 0.99068 0.0 0.023309 0.913388 0.032593 0.030709 0.012325 0.03898 0.634684 0.314011 MOTIF Hindbrain_P0_H3K4me2_34_46_0.613_1.852346e-318 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.039333 0.806099 0.043717 0.110852 0.142599 0.101899 0.699677 0.055824 0.012962 0.960662 0.018679 0.007697 0.021678 0.87657 0.068768 0.032983 0.116244 0.033375 0.837584 0.012796 0.010008 0.024256 0.889563 0.076173 0.099045 0.009197 0.88364 0.008118 0.162672 0.116889 0.600528 0.119912 0.738362 0.071386 0.035375 0.154877 MOTIF Hindbrain_E11.5_H3K4me2_22_34_0.663_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.014135 0.862852 0.060717 0.062296 0.146879 0.79735 0.018947 0.036824 0.20655 0.511187 0.053314 0.228949 0.01422 0.957892 0.013015 0.014872 0.038717 0.06272 0.851644 0.046919 0.007789 0.064796 0.923865 0.003551 0.093828 0.705051 0.010458 0.190662 0.010619 0.007123 0.948976 0.033282 0.055187 0.0 0.643704 0.301109 MOTIF Liver_P0_H3K4me2_33_51_0.569_6.72083e-310 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.034938 0.936694 0.028368 0.0 0.051019 0.053174 0.599703 0.296104 0.018377 0.743606 0.039949 0.198068 0.017489 0.884477 0.055635 0.042398 0.017628 0.0 0.982372 0.0 0.023235 0.021744 0.718292 0.236729 0.05469 0.033496 0.765823 0.14599 0.0 0.012663 0.921203 0.066134 0.900195 0.0 0.059224 0.04058 MOTIF Forebrain_E12.5_H3K4me2_29_30_0.617_3.413101e-309 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.130537 0.82378 0.034567 0.011116 0.239968 0.681183 0.046266 0.032582 0.034483 0.934639 0.00574 0.025138 0.066595 0.855924 0.057654 0.019826 0.04753 0.00999 0.921508 0.020971 0.127675 0.041077 0.825903 0.005345 0.058758 0.906728 0.017228 0.017286 0.204537 0.057065 0.689158 0.04924 0.124357 0.016377 0.835668 0.023598 0.203744 0.31612 0.480136 0.0 MOTIF Midbrain_E13.5_H3K4me2_52_52_0.579_2.140234e-273 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.114537 0.777212 0.045547 0.062705 0.151749 0.797613 0.032495 0.018143 0.052927 0.843269 0.033999 0.069805 0.021894 0.940411 0.015276 0.022419 0.253648 0.032866 0.651257 0.062229 0.063739 0.016072 0.866651 0.053538 0.048948 0.885193 0.047576 0.018283 0.236685 0.008651 0.583299 0.171365 0.009267 0.0 0.969598 0.021135 MOTIF Kidney_P0_H3K4me2_38_33_0.595_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.011236 0.740486 0.011159 0.237119 0.116342 0.7962 0.037524 0.049934 0.042796 0.905413 0.0 0.051791 0.016467 0.874194 0.055414 0.053925 0.224649 0.180829 0.556779 0.037742 0.083739 0.043078 0.868474 0.00471 0.210395 0.677136 0.084549 0.027921 0.09503 0.021267 0.85371 0.029993 0.029808 0.0 0.935825 0.034367 MOTIF Neural-Tube_E11.5_H3K4me2_34_34_0.614_2.222307e-320 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.018268 0.735716 0.030342 0.215674 0.095631 0.845971 0.0 0.058398 0.034535 0.887513 0.02977 0.048183 0.02374 0.913554 0.03688 0.025826 0.27818 0.1119 0.566337 0.043583 0.08453 0.053742 0.857019 0.004709 0.26289 0.672776 0.048252 0.016082 0.067617 0.033072 0.871455 0.027857 0.036306 0.0 0.930696 0.032998 MOTIF Heart_P0_H3K4me2_54_45_0.567_2.747884e-303 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.150066 0.706592 0.024408 0.118934 0.062166 0.887009 0.0 0.050826 0.04907 0.89894 0.0 0.05199 0.017532 0.918173 0.013576 0.05072 0.303352 0.028849 0.654497 0.013303 0.117477 0.086443 0.789271 0.006809 0.240095 0.724565 0.022752 0.012588 0.15177 0.0 0.802947 0.045283 0.024901 0.0 0.926438 0.048661 MOTIF Neural-Tube_E14.5_H3K4me2_52_32_0.593_1.030098e-309 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.064093 0.82699 0.023046 0.085871 0.045756 0.869872 0.02186 0.062512 0.058854 0.859002 0.044436 0.037708 0.021624 0.895539 0.046882 0.035954 0.341947 0.05073 0.566003 0.04132 0.114102 0.065589 0.785661 0.034648 0.341697 0.620495 0.021439 0.016368 0.034837 0.0 0.943528 0.021635 0.020418 0.037653 0.914116 0.027814 0.0 0.070755 0.711022 0.218223 MOTIF Hindbrain_P0_H3K9ac_60_48_0.562_2.057816e-100 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.026163 0.806687 0.022167 0.144983 0.188246 0.083522 0.685297 0.042934 0.028508 0.971492 0.0 0.0 0.066027 0.889116 0.01464 0.030217 0.226474 0.078314 0.695211 0.0 0.334486 0.043069 0.581215 0.04123 0.024922 0.007465 0.946135 0.021478 0.028453 0.031273 0.922795 0.017479 0.951988 0.0 0.022417 0.025594 0.630627 0.34477 0.0 0.024603 MOTIF Hindbrain_E15.5_H3K9ac_37_51_0.634_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.011054 0.969879 0.019066 0.0 0.158467 0.072819 0.726546 0.042168 0.034825 0.759693 0.04472 0.160763 0.028799 0.883605 0.014291 0.073304 0.042902 0.025328 0.895789 0.035982 0.167237 0.061369 0.602776 0.168619 0.013039 0.03329 0.83398 0.119691 0.039625 0.035286 0.776161 0.148928 0.890424 0.055756 0.029675 0.024145 MOTIF Neural-Tube_E11.5_H3K9ac_72_53_0.551_8.358955e-74 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.069444 0.804851 0.010858 0.114848 0.117427 0.187288 0.650253 0.045032 0.020127 0.861403 0.024904 0.093566 0.028446 0.66421 0.022928 0.284416 0.021802 0.037021 0.907066 0.034111 0.078502 0.039405 0.793603 0.08849 0.012653 0.012605 0.808295 0.166447 0.074197 0.01352 0.91071 0.001573 0.861509 0.0 0.018538 0.119953 MOTIF Neural-Tube_E11.5_H3K9ac_45_41_0.585_2.0944e-193 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.081495 0.64821 0.036419 0.233876 0.121182 0.860412 0.00722 0.011186 0.030512 0.908408 0.02204 0.03904 0.044189 0.824036 0.054347 0.077429 0.261524 0.0 0.687466 0.051011 0.007515 0.067385 0.917089 0.00801 0.035833 0.887618 0.047227 0.029322 0.243905 0.0 0.707621 0.048474 0.021928 0.008575 0.936151 0.033346 MOTIF Cranio-Facial_E12.5_H3K9ac_30_45_0.589_3.664266e-270 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.89367 0.027481 0.078849 0.034838 0.923307 0.014622 0.027233 0.27249 0.527763 0.030793 0.168953 0.027662 0.943772 0.011208 0.017358 0.053075 0.059424 0.853858 0.033644 0.084112 0.037225 0.867683 0.01098 0.215125 0.657485 0.094819 0.032572 0.046171 0.0 0.74825 0.205579 0.054004 0.0 0.911195 0.034801 MOTIF Kidney_E15.5_H3K9ac_28_36_0.649_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.042777 0.795994 0.04165 0.11958 0.056518 0.862308 0.0 0.081175 0.103234 0.681255 0.039952 0.175559 0.028699 0.915974 0.021393 0.033934 0.119207 0.113778 0.764916 0.0021 0.028439 0.012111 0.913883 0.045566 0.20911 0.708871 0.052471 0.029548 0.078377 0.05713 0.846935 0.017557 0.036865 0.025131 0.837181 0.100824 MOTIF Neural-Tube_E13.5_H3K9ac_37_22_0.571_9.758808e-234 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.04782 0.906215 0.005711 0.040253 0.057641 0.876952 0.028895 0.036513 0.133511 0.637836 0.069787 0.158865 0.033534 0.886427 0.035671 0.044368 0.034587 0.03076 0.907672 0.026981 0.086091 0.072512 0.769838 0.071559 0.204699 0.66552 0.086072 0.043709 0.011983 0.0 0.967099 0.020918 0.061277 0.013663 0.642258 0.282802 0.160847 0.028264 0.687968 0.12292 0.093479 0.041031 0.0 0.86549 MOTIF Stomach_E15.5_H3K9ac_50_61_0.591_1.522501e-87 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.142214 0.810382 0.0 0.047404 0.031928 0.906118 0.027761 0.034193 0.038336 0.890544 0.013331 0.057789 0.038304 0.910791 0.034202 0.016703 0.253403 0.032439 0.679264 0.034894 0.117247 0.004793 0.872472 0.005488 0.028117 0.71931 0.217985 0.034588 0.042484 0.033286 0.787085 0.137146 0.034505 0.037299 0.67597 0.252225 0.244513 0.0 0.464912 0.290575