MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Forebrain_E16.5_H3K4me2_50_70_0.579_5.298216e-277
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.046403	0.881604	0.0	0.071993
0.0	0.989622	0.010378	0.0
0.22544	0.0	0.0	0.77456
0.0	1.0	0.0	0.0
0.027761	0.082466	0.877587	0.012186
0.028072	0.059273	0.721015	0.191639
0.080976	0.055848	0.863175	0.0
0.030032	0.626145	0.054216	0.289606
0.203744	0.0	0.693326	0.10293

MOTIF	Heart_E15.5_H3K4me2_43_33_0.579_5.55978e-290
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.198791	0.667997	0.048424	0.084787
0.0	1.0	0.0	0.0
0.131639	0.0	0.0	0.868361
0.009976	0.990024	0.0	0.0
0.013252	0.079878	0.882466	0.024403
0.073131	0.0	0.926869	0.0
0.105617	0.022341	0.506339	0.365703
0.02421	0.835347	0.106325	0.034117
0.107303	0.054471	0.793056	0.04517

MOTIF	Forebrain_E12.5_H3K4me2_99_129_0.520_1.698548e-45
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.960321	0.0	0.039679	0.0
0.212487	0.018408	0.545136	0.223969
0.032829	0.555626	0.0	0.411545
0.017188	0.759403	0.025702	0.197707
0.019959	0.919405	0.04122	0.019416
0.008516	0.146304	0.840074	0.005106
0.950179	0.049821	0.0	0.0
0.0	0.0	1.0	0.0
0.116677	0.065022	0.760103	0.058198

MOTIF	Kidney_E16.5_H3K4me2_89_59_0.524_1.203928e-83
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.095015	0.0	0.62012	0.284865
0.038841	0.908434	0.0	0.052725
0.120566	0.871037	0.0	0.008397
0.031062	0.87543	0.013805	0.079704
0.0	0.054605	0.945395	0.0
0.715332	0.0	0.0	0.284668
0.009694	0.049442	0.940864	0.0
0.048908	0.097785	0.834617	0.01869
0.013588	0.626464	0.010618	0.34933

MOTIF	Kidney_E16.5_H3K4me2_101_104_0.508_3.135417e-77
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.723551	0.022867	0.223819	0.029763
0.265809	0.014812	0.636534	0.082844
0.066782	0.884524	0.031797	0.016897
0.022172	0.977828	0.0	0.0
0.034306	0.756661	0.040673	0.16836
0.007568	0.061915	0.930518	0.0
0.90816	0.02427	0.0	0.06757
0.0	0.0	1.0	0.0
0.101113	0.129449	0.71899	0.050448

MOTIF	Kidney_E15.5_H3K4me2_58_58_0.556_3.468904e-194
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.026442	0.081255	0.734746	0.157557
0.139715	0.686268	0.045775	0.128242
0.07427	0.817414	0.059823	0.048493
0.08729	0.791561	0.077195	0.043954
0.0	0.045419	0.954581	0.0
0.84444	0.034434	0.035761	0.085364
0.006888	0.043681	0.949431	0.0
0.05826	0.092595	0.679308	0.169836
0.185479	0.656366	0.049466	0.10869

MOTIF	Hindbrain_E15.5_H3K4me2_84_77_0.523_1.125945e-79
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.233048	0.182735	0.548478	0.03574
0.067921	0.70526	0.060543	0.166276
0.007845	0.903574	0.031316	0.057265
0.254063	0.655665	0.04354	0.046732
0.0	0.054725	0.945275	0.0
0.867447	0.027525	0.01663	0.088398
0.0	0.030538	0.963035	0.006427
0.072247	0.032283	0.841537	0.053933
0.148508	0.767415	0.061333	0.022744

MOTIF	Midbrain_E14.5_H3K4me2_83_86_0.537_8.53271e-130
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.2232	0.073321	0.63789	0.065589
0.051367	0.768572	0.0	0.180062
0.011811	0.972276	0.00761	0.008303
0.083353	0.868597	0.02254	0.025509
0.0	0.126386	0.873614	0.0
0.807414	0.042161	0.026989	0.123436
0.0	0.017993	0.982007	0.0
0.012117	0.064769	0.764692	0.158422
0.204669	0.595661	0.045586	0.154085

MOTIF	Liver_E15.5_H3K9ac_43_75_0.566_1.685684e-167
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.0	0.165363	0.816593	0.018044
0.245537	0.623035	0.131429	0.0
0.012324	0.987676	0.0	0.0
0.028197	0.468015	0.474786	0.029002
0.0	0.044661	0.949035	0.006303
0.974569	0.0	0.0	0.025431
0.0	0.016067	0.983933	0.0
0.038816	0.0	0.961184	0.0

MOTIF	Neural-Tube_E15.5_H3K9ac_67_90_0.565_1.682921e-134
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.03928	0.935216	0.025504
0.019994	0.942823	0.0	0.037183
0.006762	0.928486	0.030235	0.034517
0.253096	0.27782	0.44449	0.024594
0.0	0.050445	0.949555	0.0
0.900861	0.048785	0.050354	0.0
0.0	0.158975	0.824199	0.016825
0.053251	0.033692	0.90448	0.008577
0.587571	0.046309	0.319875	0.046245

MOTIF	Cranio-Facial_E11.5_H3K4me1_28_24_0.546_3.236054e-55
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.201536	0.730637	0.033795	0.034032
0.041329	0.929651	0.013109	0.015912
0.245186	0.052954	0.109969	0.591892
0.010743	0.989257	0.0	0.0
0.0	0.040445	0.929174	0.030381
0.012208	0.051627	0.920788	0.015377
0.203719	0.076427	0.704552	0.015302
0.076206	0.025874	0.700161	0.197759
0.097011	0.879558	0.01685	0.006581

MOTIF	Limb_E14.5_H3K4me1_21_47_0.522_6.218829e-52
letter-probability matrix: alength= 4 w= 7 nsites= 100 E= 1.0e-1
0.0	0.87368	0.073186	0.053135
0.044295	0.955705	0.0	0.0
0.041043	0.927694	0.031263	0.0
0.027385	0.209939	0.762676	0.0
0.826111	0.060882	0.0	0.113007
0.072207	0.0	0.927793	0.0
0.030553	0.04396	0.893511	0.031976

MOTIF	Cranio-Facial_E14.5_H3K4me3_36_51_0.654_8.403213e-309
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.158946	0.286545	0.430715	0.123794
0.188464	0.551809	0.060915	0.198812
0.047322	0.929754	0.008529	0.014396
0.019792	0.029626	0.741714	0.208868
0.220835	0.738072	0.034079	0.007014
0.007874	0.873563	0.114099	0.004464
0.123649	0.769864	0.10241	0.004077
0.010273	0.037514	0.934883	0.017331
0.908812	0.012644	0.012886	0.065658
0.0	0.025433	0.974567	0.0

MOTIF	Neural-Tube_E13.5_H3K4me3_28_30_0.675_1.593441e-309
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.048812	0.760447	0.158034	0.032706
0.0	1.0	0.0	0.0
0.177593	0.162684	0.048038	0.611685
0.0	0.978877	0.021123	0.0
0.0	0.015086	0.978064	0.00685
0.0	0.0	0.943125	0.056875
0.032639	0.0	0.928	0.039361
0.07461	0.905376	0.0	0.020014
0.0	0.101067	0.898933	0.0

MOTIF	Liver_E11.5_H3K27me3_26_41_0.522_1.323581e-21
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.075808	0.0	0.834305	0.089887
0.045721	0.885269	0.037935	0.031075
0.004179	0.954597	0.036518	0.004706
0.188438	0.740528	0.062094	0.00894
0.017027	0.028323	0.947316	0.007334
0.888033	0.0	0.064203	0.047764
0.0	0.105242	0.894758	0.0
0.041512	0.072344	0.61508	0.271063
0.286622	0.531561	0.040346	0.141471
0.026048	0.126172	0.753144	0.094635

MOTIF	Stomach_P0_H3K27ac_29_46_0.533_1.940351e-52
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.107967	0.017223	0.826395	0.048415
0.01073	0.923803	0.065466	0.0
0.007107	0.967164	0.025729	0.0
0.019096	0.945311	0.035593	0.0
0.024827	0.0	0.975173	0.0
0.782539	0.011402	0.080698	0.12536
0.0	0.10869	0.89131	0.0
0.272221	0.029029	0.429358	0.269392
0.028511	0.51096	0.219773	0.240755

MOTIF	Neural-Tube_E12.5_H3K9ac_47_47_0.585_1.057817e-175
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.339848	0.277363	0.048907	0.333881
0.0	0.956148	0.043852	0.0
0.034097	0.939579	0.017258	0.009065
0.008196	0.03131	0.960494	0.0
0.936125	0.013245	0.0	0.050629
0.0	0.011879	0.988121	0.0
0.019374	0.008976	0.732152	0.239498
0.055344	0.656637	0.052381	0.235637
0.128285	0.068945	0.726005	0.076765
0.246125	0.495644	0.058916	0.199314

MOTIF	Cranio-Facial_E15.5_H3K9ac_45_64_0.596_3.843297e-159
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.215653	0.730069	0.014616	0.039663
0.001568	0.962543	0.035889	0.0
0.1914	0.746921	0.033702	0.027977
0.007043	0.046236	0.946721	0.0
0.842258	0.030103	0.056086	0.071553
0.0	0.018498	0.980853	0.000649
0.117755	0.06851	0.546953	0.266782
0.029016	0.910597	0.040885	0.019502
0.209883	0.124077	0.573994	0.092046

MOTIF	Intestine_E16.5_H3K9ac_62_81_0.535_2.780967e-46
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.071587	0.0	0.928413	0.0
0.050863	0.889797	0.05934	0.0
0.0	0.977467	0.022533	0.0
0.14577	0.74992	0.03304	0.07127
0.0	0.0	1.0	0.0
0.906331	0.0	0.0	0.093669
0.0	0.059795	0.940205	0.0
0.216969	0.108039	0.460221	0.214771
0.0	0.92413	0.033949	0.041921

MOTIF	Limb_E15.5_H3K9ac_44_58_0.596_3.972147e-153
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.153717	0.779776	0.0	0.066506
0.0	0.983548	0.016452	0.0
0.191378	0.728939	0.034888	0.044794
0.0	0.0	1.0	0.0
0.790738	0.051534	0.0	0.157728
0.0	0.117889	0.882111	0.0
0.22432	0.040142	0.670294	0.065244
0.055568	0.712819	0.046397	0.185215
0.008946	0.04297	0.851255	0.096828

MOTIF	Cranio-Facial_E11.5_H3K9ac_73_94_0.539_5.123026e-36
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.05815	0.0	0.901942	0.039908
0.228545	0.688628	0.065788	0.017039
0.015025	0.968274	0.016702	0.0
0.186212	0.743581	0.053853	0.016353
0.0	0.071638	0.928362	0.0
0.865749	0.026324	0.0	0.107928
0.0	0.055596	0.941951	0.002453
0.039701	0.023769	0.728534	0.207996
0.26036	0.595762	0.063338	0.08054

MOTIF	Kidney_E14.5_H3K9ac_64_53_0.563_3.890362e-146
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.328709	0.406222	0.053846	0.211223
0.196532	0.217517	0.383762	0.20219
0.239453	0.683435	0.037526	0.039585
0.019875	0.903744	0.076382	0.0
0.071506	0.848198	0.049706	0.03059
0.005306	0.082763	0.90977	0.002161
0.8328	0.06141	0.00862	0.09717
0.004419	0.091619	0.903962	0.0
0.022859	0.015455	0.928041	0.033645
0.118534	0.721931	0.038822	0.120713

MOTIF	Kidney_E16.5_H3K9ac_55_45_0.554_4.015484e-161
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.279835	0.489237	0.194403	0.036526
0.225291	0.063099	0.657506	0.054103
0.171262	0.678349	0.04765	0.102739
0.033828	0.931246	0.034926	0.0
0.09237	0.809981	0.033578	0.064071
0.0	0.075239	0.924761	0.0
0.776422	0.05468	0.006452	0.162446
0.006087	0.087304	0.906609	0.0
0.054433	0.0	0.869984	0.075583
0.129104	0.813212	0.010276	0.047408

MOTIF	Lung_E14.5_H3K9ac_62_67_0.546_5.365772e-73
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.207937	0.118696	0.638267	0.0351
0.105208	0.692979	0.095545	0.106268
0.026082	0.921096	0.035454	0.017368
0.099769	0.665572	0.100365	0.134294
0.004241	0.074281	0.921478	0.0
0.857261	0.044321	0.0	0.098418
0.0	0.019283	0.980717	0.0
0.032908	0.012782	0.807743	0.146568
0.168242	0.751299	0.021963	0.058496

MOTIF	Stomach_P0_H3K9ac_61_69_0.556_1.27977e-73
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.410462	0.0	0.386115	0.203423
0.080981	0.888498	0.030521	0.0
0.008301	0.970244	0.021454	0.0
0.128846	0.839393	0.0	0.031761
0.008267	0.038902	0.952831	0.0
0.832604	0.076286	0.030922	0.060187
0.0	0.054425	0.938389	0.007186
0.043443	0.039067	0.685428	0.232062
0.267902	0.704009	0.020137	0.007952