MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Heart_E13.5_H3K4me2_39_66_0.567_3.950105e-233
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.144857	0.149745	0.125393	0.580005
0.075206	0.533348	0.369839	0.021607
0.177116	0.729424	0.073984	0.019476
0.01915	0.92854	0.052309	0.0
0.116736	0.062419	0.820845	0.0
0.016013	0.963435	0.0	0.020552
0.01521	0.013897	0.105781	0.865112
0.0	0.017525	0.0	0.982475
0.0	0.821181	0.0	0.178819

MOTIF	Forebrain_E12.5_H3K4me2_21_69_0.635_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.28387	0.71613	0.0	0.0
0.019187	0.036798	0.88858	0.055435
0.0	0.965374	0.034626	0.0
0.099268	0.851243	0.0	0.049489
0.025297	0.057515	0.834531	0.082657
0.0	0.922032	0.077968	0.0
0.125961	0.081174	0.040826	0.752039
0.046595	0.0	0.059985	0.89342
0.0	0.685909	0.0	0.314091

MOTIF	Cranio-Facial_E15.5_H3K4me2_62_95_0.573_1.022455e-204
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.058219	0.11951	0.774217	0.048053
0.004252	0.509549	0.290484	0.195715
0.259534	0.665601	0.046856	0.028008
0.056449	0.016415	0.834593	0.092543
0.010419	0.779472	0.008064	0.202044
0.008864	0.014304	0.068623	0.908209
0.050003	0.035535	0.083296	0.831167
0.0	0.98335	0.0	0.01665
0.0	0.990414	0.0	0.009586

MOTIF	Limb_E11.5_H3K4me2_60_62_0.568_1.810523e-129
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.052513	0.140178	0.789053	0.018256
0.055689	0.743132	0.058326	0.142853
0.227752	0.647966	0.073631	0.050651
0.232191	0.06299	0.677766	0.027053
0.007157	0.834249	0.020463	0.138131
0.067716	0.003077	0.029968	0.899239
0.060627	0.009438	0.052181	0.877753
0.001051	0.98895	0.0	0.009999
0.003847	0.987923	0.0	0.00823
0.014914	0.31969	0.379427	0.285969

MOTIF	Neural-Tube_E11.5_H3K4me2_49_79_0.584_8.875336e-201
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.20181	0.050572	0.723543	0.024075
0.077432	0.671379	0.061762	0.189427
0.205879	0.695242	0.071969	0.026911
0.101026	0.059031	0.810894	0.02905
0.006144	0.938385	0.020284	0.035187
0.023641	0.011879	0.090438	0.874043
0.096055	0.0	0.091952	0.811993
0.0	0.845822	0.0	0.154178
0.0	0.974346	0.015828	0.009826

MOTIF	Forebrain_E15.5_H3K4me3_30_53_0.672_3.873964e-311
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	1.0	0.0	0.0
0.071257	0.928743	0.0	0.0
0.048454	0.04192	0.878811	0.030816
0.0	0.672137	0.278056	0.049806
0.193726	0.685083	0.08034	0.04085
0.098405	0.012107	0.878046	0.011443
0.0	0.911413	0.088587	0.0
0.081285	0.0	0.051632	0.867083
0.054935	0.075075	0.0	0.86999

MOTIF	Neural-Tube_E13.5_H3K4me3_51_56_0.621_3.808307e-319
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.075778	0.890862	0.0	0.03336
0.075435	0.083941	0.840624	0.0
0.0	0.743034	0.250421	0.006545
0.185342	0.754286	0.060373	0.0
0.038275	0.0	0.573616	0.388109
0.0	0.915519	0.048973	0.035508
0.071699	0.0	0.06392	0.864381
0.058883	0.0	0.0	0.941117
0.0	0.937921	0.062079	0.0

MOTIF	Hindbrain_E11.5_H3K4me3_24_21_0.717_4.035034e-320
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.020889	0.927644	0.044652	0.006816
0.81327	0.101085	0.022295	0.06335
0.003362	0.060663	0.933713	0.002262
0.109388	0.791707	0.0	0.098905
0.045684	0.027441	0.904761	0.022114
0.228439	0.025162	0.565808	0.180592
0.142587	0.658271	0.056343	0.142798
0.016927	0.023285	0.905475	0.054313
0.012432	0.908944	0.026574	0.05205
0.192315	0.263763	0.543922	0.0

MOTIF	Hindbrain_E12.5_H3K4me3_31_48_0.655_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.245362	0.674451	0.0	0.080187
0.018309	0.928546	0.053144	0.0
0.902674	0.01533	0.058151	0.023845
0.0	0.0311	0.9689	0.0
0.062498	0.839926	0.033569	0.064007
0.029523	0.083887	0.877204	0.009386
0.029857	0.076716	0.735958	0.15747
0.226856	0.706695	0.035409	0.03104
0.0	0.079035	0.67722	0.243744

MOTIF	Lung_P0_H3K4me3_27_43_0.669_7.689984e-319
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.06878	0.753821	0.043761	0.133638
0.926305	0.030578	0.0	0.043116
0.0	0.043277	0.946081	0.010642
0.329184	0.429877	0.01763	0.223309
0.046668	0.032079	0.886127	0.035126
0.0559	0.182124	0.726121	0.035855
0.053453	0.920159	0.0	0.026388
0.018744	0.002021	0.955829	0.023405
0.025761	0.826709	0.019017	0.128513
0.073138	0.0	0.502231	0.424631

MOTIF	Midbrain_E15.5_H3K4me3_10_48_0.724_0
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.805189	0.108614	0.0	0.086197
0.0	0.0	1.0	0.0
0.036904	0.900969	0.042793	0.019334
0.014343	0.0	0.924464	0.061193
0.0	0.0	0.992218	0.007782
0.044131	0.687919	0.0	0.26795
0.0	0.0	0.968574	0.031426
0.0	0.456644	0.543356	0.0

MOTIF	Kidney_P0_H3K4me3_16_21_0.694_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.010483	0.967379	0.020035	0.002103
0.797722	0.016913	0.138424	0.046942
0.005334	0.17329	0.821375	0.0
0.12899	0.854078	0.009219	0.007713
0.069175	0.052638	0.808388	0.0698
0.095655	0.313575	0.57761	0.013159
0.070315	0.775192	0.044551	0.109943
0.167033	0.062374	0.694929	0.075663
0.124527	0.107793	0.753553	0.014128

MOTIF	Liver_E12.5_H3K4me3_22_12_0.652_2.570309e-314
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.043417	0.893654	0.017574	0.045356
0.087801	0.072285	0.665431	0.174483
0.007821	0.702578	0.210166	0.079435
0.102527	0.71058	0.031433	0.15546
0.050062	0.033454	0.86896	0.047524
0.006697	0.949389	0.029631	0.014283
0.130989	0.025287	0.075853	0.767871
0.018059	0.042952	0.920013	0.018976
0.072056	0.721896	0.140136	0.065912

MOTIF	Cranio-Facial_E12.5_H3K4me3_23_9_0.700_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.041944	0.887542	0.026947	0.043567
0.06957	0.052992	0.726404	0.151033
0.064377	0.659157	0.194873	0.081593
0.100608	0.65308	0.085384	0.160928
0.035807	0.019677	0.900531	0.043985
0.002809	0.961711	0.022045	0.013434
0.098209	0.042118	0.082849	0.776824
0.015044	0.042617	0.922122	0.020217
0.06632	0.729905	0.124887	0.078888

MOTIF	Midbrain_E14.5_H3K4me3_16_10_0.714_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.117323	0.800115	0.035939	0.046623
0.052203	0.060143	0.773469	0.114185
0.061258	0.668662	0.214948	0.055132
0.082479	0.707708	0.067304	0.142509
0.043207	0.056667	0.848125	0.052001
0.001839	0.959719	0.028015	0.010427
0.102803	0.038885	0.06155	0.796762
0.014266	0.063469	0.899072	0.023193
0.061098	0.76739	0.112934	0.058578

MOTIF	Midbrain_P0_H3K4me3_17_9_0.716_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.101074	0.718243	0.108815	0.071868
0.059417	0.059125	0.773694	0.107764
0.055041	0.834299	0.064141	0.046519
0.077235	0.649666	0.121021	0.152078
0.034204	0.022775	0.907967	0.035055
0.004132	0.954732	0.033566	0.00757
0.13719	0.058434	0.111485	0.692891
0.023722	0.060756	0.85337	0.062152
0.044669	0.806769	0.069891	0.078671

MOTIF	Kidney_E14.5_H3K4me3_17_9_0.702_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.098371	0.756256	0.100893	0.04448
0.065491	0.063885	0.749631	0.120994
0.055504	0.720334	0.15359	0.070571
0.096903	0.657073	0.117939	0.128086
0.028586	0.031416	0.892308	0.04769
0.003478	0.959523	0.032139	0.00486
0.037454	0.063409	0.085742	0.813395
0.034888	0.069808	0.834139	0.061165
0.041547	0.791568	0.078637	0.088248

MOTIF	Forebrain_E13.5_H3K4me3_14_10_0.717_3.569328e-319
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.121633	0.761897	0.045363	0.071107
0.044742	0.057501	0.80623	0.091528
0.046252	0.712732	0.177292	0.063724
0.0803	0.717841	0.062378	0.139481
0.041113	0.018508	0.831965	0.108414
0.00175	0.926707	0.055964	0.01558
0.075543	0.1227	0.06978	0.731977
0.012204	0.064932	0.899825	0.023039
0.042528	0.78367	0.099077	0.074725

MOTIF	Heart_E16.5_H3K4me3_15_10_0.652_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.153695	0.738013	0.02348	0.084811
0.059123	0.048536	0.763065	0.129276
0.062527	0.778612	0.079699	0.079162
0.094424	0.662491	0.062539	0.180546
0.045902	0.022008	0.883895	0.048195
0.001091	0.978156	0.019686	0.001067
0.062318	0.099615	0.074431	0.763636
0.014844	0.051049	0.911864	0.022243
0.047406	0.717021	0.125494	0.110078

MOTIF	Forebrain_P0_H3K4me3_19_10_0.706_3.424327e-310
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.141487	0.719253	0.038821	0.100439
0.038849	0.043026	0.826105	0.09202
0.055476	0.71634	0.16165	0.066535
0.084066	0.658525	0.097212	0.160197
0.033009	0.075699	0.85025	0.041041
0.002114	0.965036	0.025352	0.007498
0.079531	0.101937	0.083168	0.735364
0.013451	0.048507	0.910394	0.027648
0.062928	0.766797	0.112567	0.057708

MOTIF	Intestine_E16.5_H3K4me3_15_13_0.676_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.128696	0.740473	0.042725	0.088106
0.071509	0.052246	0.789874	0.08637
0.058673	0.721909	0.148784	0.070634
0.112172	0.67491	0.069752	0.143165
0.045188	0.030168	0.876442	0.048201
0.003194	0.963496	0.022994	0.010315
0.10463	0.095844	0.0515	0.748026
0.012809	0.074496	0.868788	0.043906
0.070867	0.755789	0.111785	0.061559

MOTIF	Heart_E15.5_H3K4me3_17_12_0.686_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.136588	0.755262	0.034589	0.07356
0.056347	0.046525	0.784364	0.112764
0.055484	0.745892	0.135323	0.063301
0.083571	0.701936	0.067913	0.14658
0.037202	0.028581	0.889136	0.045081
0.003078	0.966403	0.021252	0.009267
0.119634	0.09832	0.079132	0.702914
0.010167	0.062881	0.890577	0.036374
0.04321	0.743631	0.127662	0.085497

MOTIF	Midbrain_E11.5_H3K4me3_13_9_0.728_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.131882	0.744079	0.055089	0.06895
0.063075	0.066342	0.761216	0.109367
0.049484	0.702286	0.173475	0.074754
0.070828	0.719825	0.067631	0.141717
0.037851	0.023108	0.897793	0.041249
0.001787	0.965764	0.022453	0.009995
0.111573	0.106027	0.073965	0.708436
0.013991	0.053505	0.872591	0.059913
0.063077	0.756088	0.123608	0.057226

MOTIF	Liver_P0_H3K4me3_18_11_0.673_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.097925	0.786976	0.030792	0.084307
0.072301	0.047491	0.783663	0.096545
0.055514	0.782238	0.091659	0.070589
0.10904	0.667768	0.071317	0.151875
0.049419	0.029137	0.881181	0.040264
0.002824	0.965485	0.022314	0.009377
0.103298	0.110868	0.070241	0.715592
0.016504	0.064261	0.871855	0.04738
0.075777	0.696092	0.166792	0.061339

MOTIF	Cranio-Facial_E11.5_H3K4me3_11_9_0.729_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.08592	0.749854	0.053876	0.110349
0.053866	0.062351	0.773232	0.110552
0.053779	0.718857	0.156528	0.070836
0.067695	0.724192	0.075076	0.133037
0.032696	0.022544	0.909716	0.035044
0.000997	0.969345	0.019433	0.010225
0.10009	0.097629	0.090193	0.712087
0.010201	0.052246	0.90502	0.032533
0.052959	0.732302	0.133723	0.081016

MOTIF	Stomach_E16.5_H3K4me3_22_11_0.677_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.053758	0.794625	0.048118	0.103498
0.061125	0.050829	0.767436	0.12061
0.065581	0.737336	0.123518	0.073565
0.085078	0.662289	0.067599	0.185033
0.044476	0.028309	0.880466	0.046749
0.002197	0.960946	0.027515	0.009342
0.112966	0.070412	0.072098	0.744524
0.011639	0.054119	0.873696	0.060546
0.076831	0.724854	0.121127	0.077188