MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Forebrain_E12.5_H3K27me3_17_118_0.512_1.938971e-12
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.040102	0.219739	0.732667	0.007493
0.770839	0.192744	0.010907	0.025509
0.829011	0.104119	0.06687	0.0
0.028453	0.010954	0.955151	0.005442
0.042918	0.134829	0.806506	0.015746
0.613717	0.349615	0.033708	0.00296
0.95498	0.017185	0.0	0.027834
0.012089	0.161356	0.826555	0.0
0.838948	0.030917	0.041465	0.08867

MOTIF	Hindbrain_E12.5_H3K27me3_15_123_0.516_3.423547e-09
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.056649	0.260775	0.679498	0.003078
0.581965	0.405159	0.003432	0.009443
0.92279	0.016182	0.027179	0.033848
0.012865	0.005247	0.978747	0.00314
0.037108	0.00869	0.943043	0.01116
0.621768	0.306511	0.048338	0.023383
0.902852	0.007189	0.005631	0.084328
0.008692	0.187933	0.803375	0.0
0.88542	0.063573	0.010719	0.040288

MOTIF	Limb_E13.5_H3K27me3_35_113_0.513_1.113724e-12
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.034191	0.238666	0.718229	0.008914
0.80464	0.164251	0.009345	0.021764
0.868214	0.059793	0.056075	0.015917
0.008873	0.004693	0.977899	0.008535
0.042839	0.101954	0.847536	0.007671
0.591859	0.369145	0.020163	0.018833
0.903913	0.02593	0.024171	0.045986
0.02475	0.164691	0.810559	0.0
0.679448	0.302049	0.008461	0.010042

MOTIF	Liver_E12.5_H3K27me3_46_119_0.513_1.187636e-10
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.03415	0.189465	0.761848	0.014537
0.728046	0.237044	0.0	0.034909
0.798797	0.103519	0.08875	0.008935
0.041527	0.01203	0.942076	0.004366
0.01022	0.057041	0.918312	0.014427
0.722052	0.210253	0.050246	0.01745
0.945612	0.021729	0.005419	0.027239
0.016922	0.155291	0.826332	0.001455
0.647506	0.308536	0.022551	0.021407

MOTIF	Stomach_E15.5_H3K27me3_42_148_0.512_3.820695e-05
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.0	0.39879	0.60121	0.0
0.712151	0.12379	0.092743	0.071317
0.934201	0.009197	0.022229	0.034373
0.0	0.0	1.0	0.0
0.001525	0.0	0.998475	0.0
0.731772	0.146584	0.0	0.121644
0.609128	0.025821	0.058619	0.306433
0.002286	0.22441	0.773304	0.0

MOTIF	Limb_E14.5_H3K27ac_93_149_0.503_1.053087e-13
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.980454	0.011191	0.008355
0.921839	0.0	0.0	0.078161
0.0	0.160177	0.839823	0.0
0.856413	0.064923	0.016761	0.061903
0.608083	0.067585	0.129736	0.194597
0.027404	0.028575	0.935581	0.00844
0.01358	0.015143	0.958914	0.012363
0.569243	0.053334	0.36629	0.011133
0.81638	0.18362	0.0	0.0
0.140724	0.584357	0.274918	0.0

MOTIF	Intestine_E15.5_H3K27ac_77_146_0.514_7.384228e-19
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.034624	0.935288	0.030088	0.0
0.991405	0.0	0.0	0.008595
0.03495	0.054061	0.902957	0.008032
0.931871	0.021509	0.04662	0.0
0.643875	0.264689	0.0	0.091436
0.045045	0.014438	0.933563	0.006954
0.029711	0.03032	0.914921	0.025048
0.620799	0.245146	0.127991	0.006064
0.72851	0.239679	0.020784	0.011026
0.226967	0.115568	0.657464	0.0

MOTIF	Stomach_E16.5_H3K27ac_79_137_0.508_2.037005e-17
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.795111	0.204889	0.0
0.93972	0.0	0.0	0.06028
0.0165	0.241677	0.610195	0.131627
0.841899	0.043642	0.041031	0.073428
0.869637	0.049163	0.063779	0.017421
0.020721	0.020552	0.956306	0.00242
0.208657	0.0	0.791343	0.0
0.89695	0.08646	0.016591	0.0
0.944321	0.035451	0.01637	0.003858
0.026872	0.187981	0.780073	0.005074

MOTIF	Intestine_E15.5_H3K4me1_67_148_0.512_7.853387e-24
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.022659	0.970289	0.0	0.007052
0.713773	0.128677	0.157549	0.0
0.030441	0.022664	0.933073	0.013822
0.780287	0.025483	0.086675	0.107555
0.71493	0.12954	0.091634	0.063896
0.019279	0.027408	0.925061	0.028252
0.019178	0.016949	0.956608	0.007266
0.955248	0.0	0.02452	0.020232
0.636903	0.347981	0.0	0.015116
0.023753	0.264355	0.711892	0.0

MOTIF	Intestine_E16.5_H3K4me1_49_148_0.517_1.889334e-25
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.993248	0.006752	0.0
0.80194	0.083354	0.029882	0.084823
0.009835	0.051301	0.923559	0.015306
0.688578	0.16422	0.047036	0.100166
0.691771	0.035609	0.0	0.272619
0.0	0.093219	0.906781	0.0
0.0	0.00535	0.99465	0.0
0.806206	0.16015	0.025852	0.007792
0.981396	0.0	0.018604	0.0

MOTIF	Limb_E15.5_H3K4me1_58_144_0.517_9.563876e-30
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.004336	0.938263	0.057401	0.0
0.846013	0.073949	0.028486	0.051552
0.019832	0.195156	0.785012	0.0
0.60063	0.131307	0.026364	0.241699
0.70269	0.0	0.150995	0.146315
0.0	0.01137	0.98863	0.0
0.0	0.0	1.0	0.0
0.958333	0.0	0.0	0.041667
0.993133	0.004247	0.0	0.00262

MOTIF	Neural-Tube_E12.5_H3K27me3_21_147_0.514_1.038571e-05
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.714676	0.060917	0.060605	0.163802
0.00827	0.022198	0.969048	0.000484
0.832138	0.135945	0.0	0.031917
0.949012	0.004569	0.023667	0.022752
0.007543	0.003025	0.98033	0.009102
0.017785	0.007094	0.974441	0.00068
0.763665	0.083442	0.032505	0.120388
0.793645	0.097521	0.057969	0.050865
0.113133	0.167247	0.714156	0.005465

MOTIF	Cranio-Facial_E12.5_H3K9me3_87_121_0.508_0.0001697955
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.812722	0.09581	0.091468	0.0
0.05699	0.238928	0.695236	0.008847
0.03457	0.95005	0.008649	0.006732
0.950437	0.022811	0.02188	0.004872
0.008122	0.044095	0.921951	0.025832
0.070905	0.207313	0.693779	0.028004
0.836578	0.042311	0.104733	0.016378
0.679691	0.082462	0.224582	0.013265
0.076508	0.07614	0.808212	0.03914

MOTIF	Hindbrain_E12.5_H3K9me3_111_93_0.506_8.498699e-06
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.751607	0.011484	0.23691	0.0
0.200079	0.055279	0.574051	0.170591
0.078367	0.771651	0.119201	0.030781
0.881263	0.079657	0.013094	0.025987
0.123872	0.048747	0.818988	0.008393
0.187381	0.760021	0.0234	0.029197
0.955975	0.008842	0.013011	0.022171
0.050176	0.008138	0.917279	0.024406
0.154511	0.084156	0.718851	0.042481
0.834698	0.021912	0.061789	0.081601
0.848437	0.030728	0.065419	0.055417

MOTIF	Intestine_P0_H3K9me3_33_118_0.530_3.49065e-08
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.027386	0.774455	0.10729	0.090869
0.741164	0.082153	0.010734	0.165949
0.03787	0.014221	0.931981	0.015928
0.096864	0.812134	0.051664	0.039338
0.943636	0.017392	0.014338	0.024634
0.047961	0.015137	0.917341	0.019561
0.027058	0.013399	0.714427	0.245117
0.827029	0.039824	0.05651	0.076637
0.899095	0.021862	0.064438	0.014604
0.684589	0.229252	0.080733	0.005426

MOTIF	Cranio-Facial_E15.5_H3K9me3_28_124_0.521_2.662484e-05
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.033859	0.793868	0.031867	0.140406
0.871705	0.021444	0.038705	0.068146
0.009794	0.095255	0.88774	0.007211
0.504484	0.421493	0.063818	0.010205
0.942455	0.011438	0.003101	0.043006
0.003363	0.010456	0.97679	0.009391
0.054982	0.044365	0.798307	0.102345
0.930925	0.028055	0.018893	0.022127
0.883123	0.065666	0.029195	0.022016
0.006347	0.321695	0.626298	0.04566

MOTIF	Heart_E14.5_H3K9me3_21_179_0.539_7.390977e-47
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.647	0.055	0.153	0.145
0.116	0.001	0.676	0.207
0.282	0.716	0.001	0.001
0.987	0.001	0.001	0.011
0.184	0.001	0.804	0.011
0.203	0.129	0.422	0.245
0.997	0.001	0.001	0.001
0.844	0.001	0.085	0.07
0.04	0.519	0.356	0.085
0.156	0.457	0.001	0.386

MOTIF	Limb_E13.5_H3K9me3_21_55_0.536_7.604449e-46
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.027979	0.812278	0.126266	0.033476
0.947736	0.028363	0.02087	0.003031
0.055493	0.019569	0.888164	0.036775
0.053481	0.896929	0.027906	0.021685
0.97923	0.005142	0.006785	0.008844
0.056954	0.012391	0.925852	0.004803
0.249291	0.116595	0.285471	0.348644
0.800968	0.022556	0.098635	0.077841
0.92768	0.002638	0.054046	0.015635
0.196484	0.396037	0.378282	0.029197

MOTIF	Midbrain_E13.5_H3K9me3_27_9_0.531_1.370158e-20
letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1
0.0	0.91127	0.036248	0.052482
0.957591	0.009051	0.017429	0.015929
0.136133	0.001449	0.802274	0.060144
0.023949	0.949363	0.010581	0.016107
0.848721	0.014381	0.051076	0.085822
0.160607	0.008442	0.807424	0.023527
0.085581	0.043341	0.308509	0.562569
0.878675	0.009622	0.053698	0.058004
0.791192	0.020126	0.173115	0.015568
0.150844	0.586538	0.131553	0.131064
0.19628	0.055465	0.267025	0.481229
0.0	0.622015	0.123428	0.254557

MOTIF	Cranio-Facial_E13.5_H3K9me3_26_66_0.528_2.292475e-27
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.905711	0.059425	0.013428	0.021436
0.174025	0.049794	0.761114	0.015067
0.17945	0.660149	0.153596	0.006805
0.957555	0.008944	0.00478	0.028721
0.037219	0.010044	0.951188	0.001549
0.166153	0.110953	0.663154	0.059739
0.945019	0.00774	0.033421	0.01382
0.80152	0.006628	0.154052	0.0378
0.038119	0.720264	0.209245	0.032371

MOTIF	Liver_E13.5_H3K9me3_50_62_0.510_0.0003548355
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.766988	0.056476	0.088269	0.088267
0.172548	0.179583	0.636702	0.011167
0.125755	0.83017	0.010814	0.033262
0.861067	0.021853	0.099128	0.017952
0.052038	0.009405	0.92628	0.012277
0.154078	0.02763	0.786704	0.031588
0.778401	0.019508	0.135829	0.066262
0.922901	0.006538	0.044194	0.026366
0.063816	0.85277	0.052351	0.031063
0.375427	0.176575	0.206075	0.241922

MOTIF	Intestine_E16.5_H3K9me3_77_142_0.517_1.933002e-07
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.831288	0.144742	0.02397
0.899666	0.050052	0.033636	0.016646
0.105775	0.035092	0.837251	0.021883
0.14901	0.651843	0.183788	0.015359
0.871263	0.012081	0.015645	0.101012
0.109059	0.006838	0.882156	0.001948
0.020892	0.102076	0.808327	0.068705
0.844281	0.063667	0.01246	0.079592
0.870185	0.031349	0.013312	0.085153
0.232499	0.548469	0.036606	0.182426

MOTIF	Midbrain_E11.5_H3K9me3_48_125_0.514_9.682847e-05
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.96353	0.007266	0.008991	0.020213
0.031365	0.068311	0.873161	0.027163
0.056726	0.87721	0.040835	0.025228
0.955883	0.003362	0.012043	0.028712
0.031356	0.00881	0.92016	0.039673
0.109108	0.03625	0.748739	0.105903
0.695295	0.035908	0.16028	0.108517
0.810232	0.08914	0.093988	0.00664
0.034858	0.549051	0.226329	0.189762

MOTIF	Forebrain_E12.5_H3K9me3_65_103_0.519_1.280051e-12
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.06095	0.786499	0.094195	0.058356
0.814911	0.060038	0.012164	0.112888
0.078756	0.056638	0.800142	0.064464
0.125315	0.777675	0.065445	0.031565
0.916125	0.008657	0.022783	0.052435
0.053468	0.006575	0.929018	0.010939
0.09104	0.075471	0.709835	0.123654
0.881489	0.016238	0.026922	0.075351
0.824583	0.023723	0.142007	0.009686
0.090448	0.585812	0.156735	0.167004

MOTIF	Neural-Tube_E13.5_H3K9me3_48_82_0.526_1.743953e-23
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.045423	0.770263	0.099146	0.085168
0.932301	0.031624	0.001704	0.034371
0.089218	0.033271	0.852806	0.024706
0.042328	0.880243	0.00347	0.073958
0.84377	0.024251	0.011657	0.120322
0.055665	0.004875	0.898122	0.041338
0.162451	0.035606	0.586564	0.215378
0.862125	0.01202	0.018748	0.107107
0.754461	0.005484	0.235473	0.004582

MOTIF	Stomach_E16.5_H3K9me3_45_134_0.526_2.22735e-12
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.008379	0.751702	0.125032	0.114887
0.905055	0.047508	0.021893	0.025544
0.106994	0.049802	0.840903	0.002301
0.075926	0.8846	0.021701	0.017773
0.894272	0.043793	0.02192	0.040015
0.012204	0.018745	0.943844	0.025207
0.018047	0.033665	0.72458	0.223708
0.720242	0.018371	0.094448	0.166938
0.795803	0.012233	0.191964	0.0