MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Hindbrain_E13.5_H3K27me3_25_93_0.515_6.797385e-38 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.80764 0.068563 0.10119 0.022607 0.071841 0.016458 0.909358 0.002343 0.011555 0.027967 0.955136 0.005342 0.688711 0.079086 0.088213 0.14399 0.657269 0.208296 0.0652 0.069235 0.172126 0.080207 0.741613 0.006054 0.024926 0.952369 0.02129 0.001415 0.036949 0.04268 0.056845 0.863526 0.019794 0.178105 0.791991 0.01011 0.236605 0.256257 0.035486 0.471652 MOTIF Hindbrain_E12.5_H3K27me3_66_83_0.505_4.731479e-08 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.734588 0.028071 0.228435 0.008906 0.015864 0.059195 0.923149 0.001791 0.170585 0.005888 0.822679 0.000849 0.82751 0.086907 0.072046 0.013536 0.593922 0.268489 0.078238 0.059351 0.146415 0.049774 0.740828 0.062983 0.014108 0.946559 0.039333 0.0 0.019727 0.070039 0.040636 0.869598 0.080721 0.01034 0.905942 0.002997 0.040658 0.224754 0.112125 0.622462 0.012229 0.024184 0.961173 0.002414 MOTIF Neural-Tube_E12.5_H3K27me3_39_117_0.507_1.406681e-08 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.799452 0.073838 0.12671 0.0 0.017867 0.012785 0.87484 0.094507 0.182719 0.002947 0.811722 0.002613 0.782642 0.032509 0.021229 0.16362 0.585703 0.218744 0.137419 0.058133 0.202988 0.113117 0.655998 0.027898 0.019154 0.941405 0.039441 0.0 0.071882 0.010617 0.039692 0.877808 0.003028 0.00981 0.984835 0.002328 0.027608 0.319944 0.245509 0.406939 MOTIF Neural-Tube_E13.5_H3K27me3_31_52_0.510_5.744106e-20 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.312292 0.299067 0.345481 0.04316 0.769028 0.136835 0.076089 0.018049 0.012829 0.013299 0.93807 0.035802 0.115284 0.006181 0.877527 0.001008 0.873122 0.03314 0.077177 0.016561 0.666504 0.183731 0.092413 0.057353 0.118269 0.023908 0.808281 0.049542 0.016936 0.940179 0.040345 0.00254 0.009919 0.272366 0.03114 0.686576 0.085131 0.048183 0.846318 0.020367 0.039079 0.167748 0.071882 0.72129 MOTIF Intestine_E15.5_H3K4me1_52_61_0.521_3.774793e-32 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.061467 0.527498 0.398705 0.01233 0.782564 0.066509 0.059191 0.091736 0.015171 0.004753 0.978669 0.001407 0.136235 0.007526 0.855119 0.00112 0.856696 0.059566 0.079943 0.003795 0.731858 0.100354 0.091158 0.07663 0.132447 0.062079 0.725879 0.079595 0.121292 0.785685 0.051332 0.04169 0.092449 0.047045 0.127775 0.732731 0.006711 0.066199 0.891292 0.035798 MOTIF Kidney_E15.5_H3K4me1_45_37_0.519_1.33552e-39 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.677282 0.046067 0.205621 0.07103 0.015971 0.020339 0.938774 0.024917 0.110267 0.037754 0.843758 0.008221 0.709966 0.101643 0.176927 0.011464 0.77625 0.08406 0.098919 0.04077 0.102654 0.041886 0.829579 0.02588 0.022472 0.944551 0.018835 0.014142 0.094738 0.154553 0.040769 0.709941 0.031848 0.122227 0.835632 0.010293 0.074432 0.102372 0.497284 0.325912 0.122515 0.349402 0.373904 0.15418 MOTIF Forebrain_E15.5_H3K4me1_65_85_0.514_1.661595e-41 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.694518 0.215354 0.07024 0.019888 0.829498 0.041214 0.115743 0.013544 0.004853 0.009701 0.951195 0.03425 0.047906 0.00864 0.943453 0.0 0.950882 0.015644 0.031355 0.002119 0.631358 0.093991 0.036937 0.237713 0.275825 0.05295 0.584455 0.08677 0.052578 0.90904 0.038382 0.0 0.094244 0.057535 0.134159 0.714063 0.007666 0.033923 0.938421 0.019991 MOTIF Heart_E14.5_H3K4me1_53_40_0.510_8.736075e-16 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.361103 0.150157 0.280624 0.208115 0.684235 0.064946 0.195266 0.055552 0.018801 0.014416 0.95761 0.009173 0.137212 0.026444 0.82957 0.006773 0.773775 0.072378 0.137978 0.015869 0.798623 0.084409 0.061087 0.055881 0.127947 0.038274 0.781139 0.05264 0.05212 0.877727 0.040342 0.029811 0.097303 0.10861 0.090482 0.703604 0.026794 0.069865 0.887999 0.015342 MOTIF Intestine_E16.5_H3K4me1_43_37_0.518_8.280923e-23 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.296903 0.296357 0.238842 0.167899 0.709414 0.018291 0.192307 0.079989 0.005464 0.015776 0.951367 0.027394 0.103054 0.008658 0.88733 0.000957 0.866596 0.057891 0.064251 0.011261 0.672041 0.079297 0.165801 0.082862 0.149492 0.042425 0.769138 0.038945 0.017166 0.94431 0.027328 0.011196 0.081567 0.164761 0.030543 0.723129 0.052904 0.077621 0.848632 0.020843 0.158659 0.125075 0.410658 0.305608 MOTIF Kidney_P0_H3K4me1_31_68_0.521_3.964851e-23 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.478167 0.209543 0.299085 0.013205 0.685345 0.031071 0.188641 0.094943 0.018898 0.027333 0.940207 0.013562 0.199786 0.087202 0.710178 0.002835 0.8264 0.082571 0.08493 0.006099 0.846009 0.055277 0.068947 0.029766 0.159775 0.037464 0.757957 0.044804 0.029185 0.917376 0.039657 0.013782 0.062389 0.117117 0.046023 0.774471 0.074111 0.112915 0.808909 0.004064 MOTIF Liver_E14.5_H3K4me1_93_96_0.508_6.893074e-11 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.448515 0.383852 0.135748 0.031885 0.701033 0.046128 0.219381 0.033458 0.032912 0.027954 0.927627 0.011507 0.045416 0.020569 0.931368 0.002648 0.861732 0.084374 0.014849 0.039045 0.663999 0.092074 0.146071 0.097857 0.147519 0.077223 0.740208 0.035051 0.020492 0.903483 0.061577 0.014449 0.032387 0.056629 0.04636 0.864624 0.09127 0.019152 0.887539 0.002039 MOTIF Limb_E14.5_H3K4me1_70_210_0.512_1.262738e-27 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.806754 0.036729 0.09294 0.063577 0.058991 0.016351 0.887246 0.037412 0.0223 0.025009 0.948215 0.004476 0.787677 0.077465 0.096018 0.03884 0.70433 0.071711 0.060067 0.163892 0.121247 0.089011 0.766835 0.022907 0.022742 0.87885 0.093369 0.005039 0.083068 0.128452 0.030867 0.757612 0.036193 0.12134 0.789678 0.052789 0.486385 0.111132 0.015024 0.387459 MOTIF Midbrain_E15.5_H3K4me1_30_190_0.525_4.955486e-72 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.535909 0.231825 0.194186 0.03808 0.787523 0.056618 0.059592 0.096268 0.028774 0.015623 0.912782 0.04282 0.027456 0.058784 0.908763 0.004997 0.673256 0.193059 0.083434 0.050251 0.753241 0.058665 0.061444 0.126651 0.082971 0.061363 0.818079 0.037587 0.034616 0.891817 0.062655 0.010911 0.055102 0.14473 0.018388 0.781781 0.009741 0.090344 0.840553 0.059362 MOTIF Hindbrain_E11.5_H3K36me3_79_130_0.508_1.396656e-06 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.494449 0.142088 0.363463 0.0 0.915606 0.023336 0.036198 0.024859 0.062277 0.052589 0.800571 0.084563 0.002646 0.045762 0.940132 0.01146 0.85533 0.01971 0.100472 0.024488 0.352148 0.210609 0.393168 0.044075 0.080128 0.201836 0.703873 0.014163 0.010151 0.93704 0.040797 0.012012 0.072826 0.051025 0.024574 0.851575 0.002244 0.019488 0.978268 0.0 MOTIF Neural-Tube_E11.5_H3K36me3_106_119_0.510_9.364026e-08 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.881705 0.036253 0.053895 0.028146 0.026662 0.036998 0.910853 0.025487 0.033024 0.034548 0.919434 0.012994 0.831984 0.078913 0.063825 0.025278 0.346844 0.1291 0.48412 0.039937 0.092928 0.131199 0.751169 0.024704 0.049069 0.770824 0.174915 0.005191 0.071485 0.089226 0.02811 0.811178 0.001209 0.032366 0.951975 0.01445 MOTIF Forebrain_E13.5_H3K4me2_93_78_0.504_1.143252e-12 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.804603 0.064368 0.081484 0.049545 0.090016 0.011541 0.885597 0.012845 0.097598 0.014468 0.886374 0.00156 0.726688 0.089805 0.063606 0.119901 0.258586 0.241032 0.387046 0.113336 0.03642 0.032503 0.832514 0.098562 0.01645 0.958103 0.025447 0.0 0.047916 0.07272 0.072291 0.807074 0.00738 0.028943 0.961726 0.001951 0.0 0.0 0.676089 0.323911 MOTIF Limb_E14.5_H3K4me2_94_102_0.509_5.163287e-30 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.910263 0.021452 0.033806 0.034479 0.029808 0.041946 0.909961 0.018285 0.084079 0.043028 0.872893 0.0 0.822215 0.068632 0.02255 0.086602 0.300893 0.324498 0.338593 0.036015 0.058981 0.002014 0.863892 0.075113 0.023639 0.967725 0.007358 0.001278 0.01046 0.125664 0.073697 0.790179 0.008749 0.078706 0.912546 0.0 MOTIF Liver_P0_H3K4me2_75_79_0.521_1.927603e-33 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.253745 0.321343 0.402949 0.021963 0.855133 0.08749 0.031752 0.025624 0.013046 0.01382 0.966369 0.006766 0.106017 0.005293 0.887272 0.001418 0.898453 0.055352 0.039057 0.007138 0.715 0.225798 0.039655 0.019547 0.165743 0.082409 0.716312 0.035536 0.020313 0.872447 0.054253 0.052987 0.05727 0.244381 0.069146 0.629204 0.057903 0.065267 0.865059 0.01177 0.135617 0.107919 0.44753 0.308934 MOTIF Kidney_P0_H3K4me2_111_107_0.510_2.977347e-27 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.253149 0.226332 0.196134 0.324385 0.602615 0.045405 0.320446 0.031535 0.011287 0.006194 0.978429 0.00409 0.188692 0.033753 0.773238 0.004316 0.88508 0.061696 0.036853 0.016372 0.792284 0.1259 0.048321 0.033495 0.194315 0.025078 0.725792 0.054814 0.051804 0.895526 0.039708 0.012962 0.054831 0.183197 0.02274 0.739233 0.059002 0.008524 0.918881 0.013592 MOTIF Lung_E16.5_H3K4me2_99_98_0.510_1.249873e-23 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.3017 0.140056 0.345636 0.212608 0.715205 0.033069 0.205159 0.046567 0.026404 0.013305 0.95394 0.006351 0.069527 0.0285 0.899727 0.002245 0.824502 0.124841 0.035588 0.015069 0.776728 0.163509 0.038071 0.021692 0.172982 0.016926 0.770247 0.039845 0.026767 0.856362 0.0991 0.017771 0.118815 0.176619 0.04813 0.656436 0.03519 0.038842 0.911571 0.014397 MOTIF Lung_E15.5_H3K4me2_99_121_0.505_5.222016e-27 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.832642 0.057218 0.046811 0.063328 0.004625 0.014728 0.980647 0.0 0.204133 0.022778 0.771295 0.001794 0.842684 0.100045 0.039724 0.017548 0.836493 0.087913 0.047338 0.028256 0.246454 0.029408 0.668087 0.056052 0.02515 0.874128 0.061888 0.038833 0.075192 0.179609 0.073033 0.672166 0.005424 0.050726 0.926897 0.016953 MOTIF Liver_E13.5_H3K4me2_98_130_0.501_5.943751e-14 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.875924 0.020662 0.087645 0.015769 0.008653 0.006771 0.984576 0.0 0.202283 0.0 0.796415 0.001302 0.884551 0.073982 0.036067 0.0054 0.789904 0.173005 0.02857 0.008521 0.219302 0.07858 0.649008 0.05311 0.004222 0.915754 0.038597 0.041427 0.120936 0.091261 0.087231 0.700572 0.058112 0.10514 0.836748 0.0 MOTIF Stomach_E16.5_H3K4me2_99_122_0.504_1.035209e-22 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.770394 0.0 0.200532 0.029074 0.030628 0.013899 0.952004 0.003469 0.153981 0.032822 0.808414 0.004783 0.754623 0.170523 0.063857 0.010997 0.764885 0.158023 0.053839 0.023253 0.160328 0.042585 0.743668 0.05342 0.004996 0.910162 0.063495 0.021347 0.060162 0.111487 0.112686 0.715665 0.06197 0.064069 0.871101 0.00286 MOTIF Kidney_E14.5_H3K9me3_77_85_0.511_1.623472e-07 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.047909 0.897433 0.012532 0.042126 0.01783 0.892964 0.017899 0.071307 0.899032 0.036176 0.033644 0.031148 0.055735 0.109322 0.619541 0.215403 0.15037 0.006727 0.75368 0.089223 0.031075 0.205529 0.036151 0.727245 0.041423 0.016156 0.012869 0.929551 0.028667 0.945562 0.021306 0.004465 0.134291 0.76691 0.009646 0.089153 MOTIF Liver_E16.5_H3K9me3_43_139_0.527_5.304808e-07 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.029054 0.77253 0.10615 0.092266 0.072053 0.797693 0.023663 0.106591 0.014572 0.839143 0.034917 0.111369 0.880613 0.023102 0.085515 0.01077 0.068427 0.085007 0.780198 0.066368 0.124545 0.034392 0.826315 0.014748 0.025521 0.1837 0.12156 0.669219 0.105076 0.04395 0.031378 0.819595 0.017712 0.825958 0.016084 0.140245 MOTIF Midbrain_E11.5_H3K9me3_23_124_0.526_4.100087e-07 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.709687 0.052337 0.075303 0.162673 0.063848 0.017028 0.750483 0.168641 0.04371 0.025242 0.893653 0.037396 0.879091 0.000441 0.007778 0.112689 0.607566 0.038863 0.215158 0.138414 0.070201 0.897311 0.018681 0.013807 0.168646 0.806907 0.016663 0.007784 0.022886 0.027109 0.003084 0.946921 0.086825 0.090802 0.794776 0.027597 0.130258 0.03463 0.269711 0.565401 MOTIF Midbrain_E16.5_H3K9me3_61_127_0.515_5.934659e-08 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.762081 0.014426 0.220363 0.003131 0.138363 0.004276 0.828345 0.029016 0.101957 0.017762 0.862892 0.01739 0.814264 0.112244 0.040436 0.033056 0.719915 0.055059 0.01161 0.213415 0.116565 0.614413 0.224283 0.044739 0.005566 0.978847 0.015587 0.0 0.046935 0.0322 0.0 0.920864 0.00443 0.120366 0.846643 0.02856