MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Intestine_E16.5_H3K27me3_16_164_0.556_3.039487e-40
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.001	0.001	0.185	0.813
0.078	0.66	0.261	0.001
0.147	0.279	0.001	0.573
0.01	0.988	0.001	0.001
0.142	0.856	0.001	0.001
0.001	0.001	0.997	0.001
0.271	0.386	0.249	0.094
0.001	0.001	0.778	0.22

MOTIF	Lung_E15.5_H3K27me3_15_159_0.538_4.165763e-36
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.623	0.127	0.103	0.147
0.116	0.112	0.112	0.66
0.087	0.063	0.133	0.717
0.081	0.739	0.084	0.096
0.113	0.122	0.002	0.763
0.06	0.733	0.112	0.095
0.084	0.779	0.003	0.134
0.108	0.139	0.653	0.1
0.106	0.655	0.125	0.114
0.118	0.119	0.683	0.08

MOTIF	Heart_E13.5_H3K4me3_38_159_0.638_0
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.031	0.001	0.061	0.907
0.001	0.882	0.068	0.049
0.035	0.049	0.843	0.073
0.001	0.949	0.049	0.001
0.001	0.001	0.872	0.126
0.043	0.024	0.915	0.018
0.873	0.034	0.046	0.047
0.009	0.019	0.929	0.043

MOTIF	Forebrain_E11.5_H3K4me2_65_38_0.576_1.56334e-132
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.017506	0.809687	0.047839	0.124968
0.152648	0.035001	0.688898	0.123453
0.131541	0.650549	0.042026	0.175884
0.036995	0.037549	0.85504	0.070415
0.009652	0.044078	0.944308	0.001962
0.786611	0.020387	0.090562	0.10244
0.007515	0.023129	0.967444	0.001912
0.85968	0.041773	0.034361	0.064185
0.266182	0.025587	0.64057	0.067661
0.339381	0.035675	0.419986	0.204958
0.06005	0.899202	0.01356	0.027189

MOTIF	Heart_E12.5_H3K4me2_27_37_0.589_6.777069e-311
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.959105	0.026765	0.01413
0.109913	0.031594	0.781666	0.076827
0.0	0.840585	0.095497	0.063917
0.008764	0.037578	0.924572	0.029085
0.007254	0.033005	0.95974	0.0
0.592036	0.012405	0.045782	0.349776
0.072747	0.019076	0.870482	0.037695
0.812549	0.017666	0.032266	0.137519
0.351537	0.0389	0.53795	0.071613

MOTIF	Intestine_E16.5_H3K4me2_55_85_0.570_9.127355e-192
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.127572	0.859774	0.0	0.012654
0.04085	0.111736	0.431352	0.416062
0.0	0.671254	0.021028	0.307719
0.020771	0.241462	0.71253	0.025237
0.0	0.041049	0.958951	0.0
0.818536	0.042549	0.064523	0.074391
0.002696	0.006347	0.990957	0.0
0.942965	0.028525	0.0	0.028509
0.065627	0.08352	0.725485	0.125368

MOTIF	Limb_E13.5_H3K4me2_78_85_0.537_4.838563e-90
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.066655	0.915945	0.0	0.0174
0.374359	0.038865	0.328636	0.258141
0.035595	0.863717	0.078003	0.022685
0.170284	0.062174	0.736213	0.031329
0.0	0.061593	0.935501	0.002907
0.80288	0.016226	0.043324	0.13757
0.013154	0.023054	0.962088	0.001704
0.91048	0.0	0.058384	0.031136
0.061069	0.006286	0.822927	0.109719

MOTIF	Hindbrain_E14.5_H3K4me2_53_65_0.577_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.12643	0.763482	0.023276	0.086812
0.24222	0.0	0.558647	0.199133
0.06671	0.71749	0.033997	0.181803
0.062473	0.085349	0.852178	0.0
0.0	0.081755	0.913822	0.004422
0.829972	0.035638	0.077788	0.056602
0.011287	0.019127	0.964237	0.005349
0.966831	0.0	0.017096	0.016072
0.01594	0.077967	0.734358	0.171735

MOTIF	Midbrain_P0_H3K4me2_54_33_0.574_2.512669e-242
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.054639	0.881394	0.035847	0.02812
0.201744	0.01698	0.605185	0.176091
0.07477	0.668331	0.058614	0.198285
0.100273	0.014273	0.872599	0.012855
0.007608	0.044165	0.939907	0.00832
0.726966	0.04617	0.049365	0.177499
0.017953	0.028774	0.952307	0.000967
0.887045	0.043372	0.034401	0.035182
0.038998	0.069333	0.812154	0.079516
0.212768	0.382011	0.297478	0.107744
0.3263	0.07267	0.168458	0.432572

MOTIF	Cranio-Facial_E15.5_H3K4me2_18_36_0.636_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.037745	0.0	0.850081	0.112174
0.015741	0.947172	0.030867	0.00622
0.065124	0.045299	0.850384	0.039192
0.052652	0.853512	0.034089	0.059748
0.048494	0.088153	0.825844	0.03751
0.02217	0.014218	0.872326	0.091286
0.617619	0.0	0.043036	0.339345
0.013619	0.267655	0.711085	0.007641
0.949821	0.0	0.0	0.050179

MOTIF	Limb_E14.5_H3K4me2_31_40_0.611_6.259249e-310
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.224944	0.067995	0.587014	0.120047
0.007815	0.838294	0.054088	0.099803
0.064396	0.045597	0.677451	0.212556
0.014727	0.854872	0.00525	0.125151
0.062881	0.021178	0.746111	0.16983
0.004848	0.028542	0.964402	0.002208
0.893038	0.0	0.062155	0.044806
0.010804	0.070981	0.911032	0.007183
0.80341	0.037876	0.051422	0.107293

MOTIF	Heart_E12.5_H3K4me2_15_156_0.608_0
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.088	0.804	0.036	0.072
0.034	0.055	0.853	0.058
0.046	0.881	0.043	0.03
0.001	0.025	0.87	0.104
0.012	0.051	0.913	0.024
0.892	0.024	0.066	0.018
0.023	0.001	0.966	0.01
0.879	0.119	0.001	0.001

MOTIF	Neural-Tube_E12.5_H3K4me2_14_157_0.639_0
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.071	0.805	0.123	0.001
0.071	0.047	0.81	0.072
0.047	0.879	0.051	0.023
0.001	0.043	0.888	0.068
0.046	0.074	0.874	0.006
0.895	0.001	0.023	0.081
0.023	0.021	0.955	0.001
0.927	0.071	0.001	0.001

MOTIF	Forebrain_E12.5_H3K4me2_10_154_0.661_0
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.182	0.635	0.099	0.084
0.086	0.078	0.835	0.001
0.001	0.846	0.152	0.001
0.001	0.075	0.807	0.117
0.352	0.096	0.544	0.008
0.686	0.001	0.179	0.134
0.001	0.001	0.827	0.171
0.838	0.001	0.16	0.001

MOTIF	Hindbrain_P0_H3K4me2_41_64_0.600_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.257977	0.679154	0.030527	0.032342
0.095081	0.824797	0.04499	0.035131
0.266356	0.0	0.726594	0.00705
0.025746	0.88356	0.037784	0.05291
0.040059	0.009358	0.790806	0.159777
0.013292	0.096904	0.87932	0.010485
0.865579	0.012682	0.043715	0.078024
0.087228	0.018971	0.889567	0.004234
0.826809	0.0	0.083369	0.089822

MOTIF	Stomach_E16.5_H3K4me2_51_62_0.581_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.134587	0.742439	0.10501	0.017964
0.010458	0.0	0.946413	0.043129
0.0	0.97523	0.003994	0.020776
0.043591	0.018397	0.607643	0.330369
0.0	0.408494	0.58761	0.003896
0.843296	0.019354	0.0	0.13735
0.0	0.016275	0.983725	0.0
0.763846	0.034339	0.071991	0.129824
0.051373	0.029434	0.846762	0.072432

MOTIF	Forebrain_E15.5_H3K9ac_20_46_0.645_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.838598	0.034773	0.072227	0.054402
0.173301	0.075324	0.540273	0.211102
0.009402	0.962166	0.022693	0.005739
0.061353	0.045471	0.608396	0.28478
0.032696	0.926563	0.010428	0.030312
0.038076	0.026408	0.888532	0.046983
0.038659	0.018255	0.940278	0.002808
0.778402	0.01941	0.064606	0.137581
0.0	0.154186	0.792694	0.05312

MOTIF	Forebrain_P0_H3K9ac_39_46_0.600_1.395218e-316
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.79076	0.029367	0.032475	0.147398
0.153578	0.043299	0.786057	0.017067
0.029927	0.806994	0.028093	0.134986
0.225197	0.0316	0.714725	0.028478
0.047152	0.700196	0.033229	0.219423
0.05235	0.023656	0.892777	0.031217
0.00478	0.026995	0.960523	0.007701
0.857061	0.045964	0.039142	0.057833
0.0	0.139551	0.851838	0.00861

MOTIF	Midbrain_E11.5_H3K9ac_64_47_0.554_3.205171e-64
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.880928	0.034609	0.043782	0.040681
0.229501	0.030945	0.718386	0.021168
0.063483	0.872337	0.050489	0.013691
0.021357	0.058613	0.689643	0.230387
0.0	0.946581	0.028802	0.024617
0.441087	0.022211	0.503227	0.033475
0.0	0.04583	0.95417	0.0
0.861946	0.045092	0.009349	0.083613
0.006055	0.0	0.982114	0.011831
0.374533	0.0	0.164363	0.461104
0.0	0.573309	0.198274	0.228417

MOTIF	Forebrain_E12.5_H3K9ac_31_45_0.602_5.368573e-314
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.179311	0.367754	0.452935
0.032336	0.0	0.75787	0.209794
0.07478	0.88477	0.027629	0.012821
0.011183	0.0	0.923022	0.065794
0.0	0.754255	0.03758	0.208165
0.028565	0.01471	0.728901	0.227825
0.005644	0.088065	0.902915	0.003376
0.910405	0.0	0.013898	0.075697
0.009631	0.02701	0.856617	0.106743
0.774461	0.046283	0.143548	0.035708

MOTIF	Forebrain_E14.5_H3K9ac_31_30_0.597_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.193481	0.041123	0.562911	0.202485
0.010698	0.841843	0.0	0.147458
0.058727	0.026228	0.720015	0.19503
0.017341	0.930139	0.010682	0.041838
0.041112	0.036056	0.742586	0.180247
0.0	0.019263	0.980737	0.0
0.750575	0.030614	0.037882	0.180929
0.0	0.023664	0.964794	0.011542
0.844739	0.021287	0.07401	0.059964
0.41197	0.373429	0.12528	0.089321

MOTIF	Hindbrain_E14.5_H3K9ac_49_84_0.569_1.137552e-224
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.054257	0.0	0.711699	0.234044
0.024772	0.893799	0.055119	0.02631
0.290701	0.0	0.612224	0.097076
0.0	0.910998	0.062453	0.026549
0.009635	0.04487	0.52952	0.415975
0.0	0.044146	0.952469	0.003385
0.88848	0.0	0.021359	0.090161
0.0	0.034717	0.965283	0.0
0.882541	0.046762	0.059375	0.011322

MOTIF	Cranio-Facial_E11.5_H3K9ac_44_163_0.575_3.309879e-188
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.059	0.579	0.209	0.153
0.052	0.056	0.802	0.09
0.061	0.855	0.083	0.001
0.001	0.016	0.927	0.056
0.034	0.022	0.943	0.001
0.962	0.001	0.001	0.036
0.001	0.001	0.974	0.024
0.997	0.001	0.001	0.001

MOTIF	Liver_E12.5_H3K9ac_41_38_0.555_1.62952e-141
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.03807	0.079488	0.743555	0.138887
0.223232	0.623022	0.023079	0.130667
0.015658	0.0	0.876145	0.108197
0.063698	0.698837	0.10363	0.133835
0.027903	0.026433	0.914601	0.031062
0.006939	0.039321	0.947426	0.006314
0.821908	0.03927	0.012055	0.126767
0.008411	0.032658	0.957051	0.00188
0.932426	0.032466	0.035108	0.0
0.023787	0.238253	0.556502	0.181459

MOTIF	Kidney_E16.5_H3K9ac_19_26_0.596_1.764408e-310
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.259669	0.048148	0.692183	0.0
0.066654	0.921181	0.0	0.012165
0.336986	0.029927	0.587773	0.045314
0.007961	0.962532	0.0	0.029507
0.0	0.034116	0.965884	0.0
0.0	0.0	0.912481	0.087519
0.749851	0.035699	0.11646	0.09799
0.025045	0.05433	0.890547	0.030077
0.770453	0.008967	0.043026	0.177554
0.381804	0.084684	0.278829	0.254683

MOTIF	Limb_E15.5_H3K9ac_45_38_0.591_5.39839e-145
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.04065	0.109636	0.845034	0.00468
0.129728	0.720582	0.03855	0.11114
0.156824	0.016013	0.782801	0.044362
0.032191	0.735397	0.003708	0.228703
0.213105	0.024776	0.670512	0.091607
0.0	0.047365	0.948816	0.003819
0.85569	0.03121	0.03361	0.079489
0.034802	0.034439	0.919176	0.011584
0.901366	0.029697	0.022273	0.046664
0.236163	0.337178	0.066235	0.360424

MOTIF	Midbrain_E14.5_H3K9ac_40_31_0.579_5.348535e-229
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.177298	0.025473	0.797229	0.0
0.119047	0.76754	0.043276	0.070137
0.045128	0.048731	0.865154	0.040987
0.08058	0.59314	0.019099	0.307182
0.056186	0.102062	0.816039	0.025712
0.012238	0.064241	0.922291	0.00123
0.684962	0.027034	0.061322	0.226682
0.011201	0.027666	0.958414	0.002718
0.93216	0.017838	0.0	0.050002
0.270221	0.470321	0.07802	0.181438