MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Liver_E14.5_H3K27me3_44_74_0.535_8.615736e-29
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.40028	0.563792	0.0	0.035928
0.0175	0.919111	0.063389	0.0
0.089861	0.709678	0.038901	0.161559
0.06257	0.0	0.93743	0.0
0.0	0.983055	0.014038	0.002907
0.900579	0.02668	0.049855	0.022886
0.0	0.032542	0.967458	0.0
0.024977	0.030293	0.781974	0.162756
0.257102	0.039157	0.430559	0.273182

MOTIF	Heart_E12.5_H3K4me2_46_41_0.559_3.499036e-280
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.900028	0.065012	0.03496
0.444129	0.31116	0.223164	0.021547
0.011283	0.958922	0.0	0.029795
0.054139	0.859379	0.053623	0.03286
0.038961	0.0	0.961039	0.0
0.007061	0.931438	0.053543	0.007959
0.860308	0.037703	0.06751	0.034479
0.0	0.06726	0.93274	0.0
0.178692	0.029526	0.767471	0.024311
0.228106	0.0	0.563697	0.208197

MOTIF	Limb_E12.5_H3K4me2_79_68_0.546_2.830948e-90
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.228746	0.771254	0.0	0.0
0.456454	0.491074	0.025994	0.026478
0.006879	0.919702	0.073419	0.0
0.100357	0.804767	0.021615	0.073261
0.031076	0.0	0.968924	0.0
0.0	0.950475	0.046711	0.002814
0.927828	0.035162	0.020723	0.016287
0.0	0.031037	0.968963	0.0
0.101892	0.03422	0.829132	0.034756

MOTIF	Limb_E11.5_H3K4me2_73_91_0.550_3.394303e-83
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.100766	0.711883	0.021187	0.166164
0.325409	0.392972	0.027991	0.253628
0.035113	0.874985	0.074299	0.015602
0.041465	0.850347	0.0	0.108188
0.022648	0.076829	0.898192	0.002331
0.0	0.955566	0.044434	0.0
0.924599	0.014131	0.012482	0.048788
0.0	0.030974	0.969026	0.0
0.061452	0.0	0.775637	0.162911

MOTIF	Hindbrain_P0_H3K4me2_87_67_0.542_1.480723e-79
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.079833	0.695598	0.015161	0.209409
0.204755	0.47346	0.0	0.321785
0.017811	0.972917	0.009273	0.0
0.079439	0.810535	0.010727	0.0993
0.046877	0.041076	0.901696	0.010351
0.0	0.958453	0.037059	0.004488
0.90572	0.012207	0.043159	0.038914
0.0	0.019333	0.980667	0.0
0.110531	0.038363	0.810123	0.040983
0.022314	0.145971	0.831715	0.0

MOTIF	Limb_E15.5_H3K4me2_78_83_0.532_2.684406e-68
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.030327	0.800282	0.021151	0.14824
0.208656	0.410875	0.0	0.380469
0.006599	0.909913	0.083488	0.0
0.056412	0.690307	0.004052	0.249229
0.031991	0.047633	0.917697	0.002679
0.0	0.860796	0.134618	0.004586
0.896832	0.012247	0.037291	0.053629
0.0	0.041125	0.958875	0.0
0.054252	0.0	0.927833	0.017915

MOTIF	Heart_E11.5_H3K4me2_81_74_0.534_8.228964e-67
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.068416	0.931584	0.0	0.0
0.031687	0.843126	0.049428	0.075759
0.394781	0.492606	0.042436	0.070178
0.040639	0.0	0.959361	0.0
0.0	0.916944	0.083056	0.0
0.895304	0.07715	0.0	0.027546
0.011051	0.037772	0.951177	0.0
0.050082	0.041777	0.893419	0.014722
0.308837	0.470522	0.031083	0.189558

MOTIF	Kidney_E15.5_H3K4me2_83_75_0.517_1.466832e-20
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.047828	0.826371	0.034897	0.090905
0.152761	0.790325	0.029083	0.027831
0.03406	0.886314	0.067511	0.012114
0.28996	0.598383	0.0	0.111656
0.241082	0.029154	0.721799	0.007965
0.01308	0.964814	0.022106	0.0
0.862435	0.012124	0.097176	0.028265
0.0	0.036239	0.962884	0.000877
0.190369	0.034926	0.713974	0.060731
0.429757	0.26287	0.155218	0.152155

MOTIF	Hindbrain_E12.5_H3K4me2_95_92_0.515_3.215757e-89
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.068449	0.830508	0.070612	0.030432
0.024355	0.961314	0.014331	0.0
0.384399	0.556144	0.023913	0.035545
0.240844	0.020362	0.732294	0.006501
0.011641	0.922236	0.065356	0.000766
0.894785	0.017902	0.047951	0.039362
0.0	0.041638	0.958362	0.0
0.080991	0.018334	0.87203	0.028645
0.147024	0.521335	0.296433	0.035207

MOTIF	Intestine_P0_H3K4me2_62_58_0.553_5.404319e-213
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.229194	0.626428	0.034577	0.109801
0.007683	0.815002	0.062884	0.114431
0.103492	0.801798	0.012137	0.082573
0.040488	0.040763	0.91312	0.005629
0.007795	0.935482	0.056723	0.0
0.820256	0.059316	0.036651	0.083777
0.0	0.032579	0.967421	0.0
0.049455	0.018174	0.897149	0.035222
0.203012	0.464763	0.220766	0.111459

MOTIF	Limb_E14.5_H3K4me2_70_48_0.552_2.261201e-137
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.22114	0.55993	0.032356	0.186575
0.129263	0.818249	0.050138	0.002351
0.152953	0.76632	0.014001	0.066726
0.10121	0.052471	0.840348	0.005971
0.018685	0.921514	0.057039	0.002762
0.87275	0.022899	0.061402	0.042949
0.0	0.064022	0.933276	0.002702
0.048724	0.065626	0.843474	0.042176
0.109271	0.510342	0.206184	0.174203

MOTIF	Neural-Tube_E12.5_H3K4me2_78_82_0.541_3.607822e-87
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.090255	0.812395	0.035751	0.061599
0.013957	0.931971	0.038806	0.015267
0.251852	0.587725	0.0	0.160423
0.03305	0.0	0.96695	0.0
0.020288	0.979712	0.0	0.0
0.793119	0.038719	0.072593	0.095569
0.0	0.05046	0.948171	0.001369
0.106563	0.0	0.64257	0.250867
0.167896	0.741876	0.049488	0.04074

MOTIF	Neural-Tube_E11.5_H3K4me2_64_83_0.561_1.010093e-101
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.426476	0.113968	0.216901	0.242655
0.161942	0.822987	0.015072	0.0
0.082275	0.917725	0.0	0.0
0.038753	0.641988	0.251902	0.067357
0.01736	0.0	0.98264	0.0
0.0	0.959942	0.040058	0.0
0.976261	0.0	0.0	0.023739
0.0	0.021113	0.978887	0.0
0.074495	0.0	0.634734	0.290771
0.167869	0.09769	0.630082	0.104358

MOTIF	Stomach_E15.5_H3K4me2_46_72_0.585_2.526266e-310
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.351334	0.572992	0.0	0.075674
0.271831	0.705104	0.023065	0.0
0.047104	0.90783	0.016573	0.028493
0.067031	0.025722	0.899775	0.007472
0.0	0.952985	0.043607	0.003408
0.88525	0.080725	0.034026	0.0
0.0	0.030814	0.963609	0.005577
0.080747	0.075286	0.49681	0.347157

MOTIF	Hindbrain_E13.5_H3K9ac_78_64_0.528_4.941446e-83
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.317092	0.252424	0.0	0.430484
0.110493	0.851775	0.037732	0.0
0.028216	0.938619	0.0	0.033165
0.150321	0.064378	0.773653	0.011648
0.0	0.866333	0.133667	0.0
0.896245	0.071696	0.0	0.032059
0.0	0.04119	0.952663	0.006146
0.0	0.0	0.967681	0.032319
0.41018	0.040532	0.540874	0.008414

MOTIF	Hindbrain_E11.5_H3K9ac_74_93_0.523_8.031946e-25
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.031021	0.934395	0.021599	0.012985
0.032524	0.720505	0.020917	0.226055
0.132587	0.0	0.867413	0.0
0.0	0.996352	0.0	0.003648
0.916491	0.0	0.0	0.083509
0.0	0.016818	0.983182	0.0
0.083567	0.019429	0.80908	0.087924
0.19184	0.011446	0.63017	0.166544
0.114857	0.710677	0.0	0.174466

MOTIF	Forebrain_E15.5_H3K9ac_81_110_0.511_8.918531e-12
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.012315	0.906031	0.041248	0.040406
0.066904	0.806025	0.017205	0.109867
0.0	0.933833	0.066167	0.0
0.097779	0.0	0.049522	0.852699
0.0	0.020172	0.979828	0.0
0.0	0.589363	0.082187	0.32845
0.030887	0.053702	0.898852	0.01656
0.0125	0.0	0.688444	0.299056
0.345203	0.641926	0.0	0.012871

MOTIF	Midbrain_E11.5_H3K9ac_87_102_0.520_6.614377e-28
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.203337	0.788374	0.0	0.00829
0.037302	0.932329	0.025308	0.005061
0.31371	0.083964	0.581729	0.020597
0.0	0.975536	0.018976	0.005488
0.864143	0.05633	0.048879	0.030648
0.0	0.023512	0.976488	0.0
0.065283	0.073263	0.808263	0.053191
0.180955	0.030199	0.777123	0.011723
0.237733	0.602402	0.018329	0.141536

MOTIF	Heart_E16.5_H3K27me3_21_38_0.525_1.16782e-19
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.880864	0.051683	0.067453
0.002521	0.941469	0.05601	0.0
0.111665	0.830637	0.039125	0.018572
0.062176	0.0	0.917782	0.020043
0.011985	0.949553	0.038462	0.0
0.848971	0.013076	0.088894	0.049059
0.0	0.327198	0.670544	0.002258
0.077524	0.0	0.702344	0.220132
0.009279	0.014873	0.789597	0.186251
0.020861	0.258581	0.340107	0.380451

MOTIF	Hindbrain_E14.5_H3K4me3_53_97_0.615_4.646069e-289
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.148458	0.710351	0.0	0.141192
0.024599	0.920496	0.034703	0.020202
0.046224	0.751062	0.17867	0.024044
0.027899	0.0	0.972101	0.0
0.0	0.921084	0.078916	0.0
0.641587	0.056198	0.0	0.302215
0.0	0.050552	0.949448	0.0
0.064396	0.0	0.703888	0.231716
0.055574	0.0554	0.889026	0.0

MOTIF	Heart_E12.5_H3K4me3_78_73_0.542_1.834122e-57
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.156062	0.684912	0.105359	0.053668
0.242322	0.596311	0.124579	0.036788
0.024382	0.950559	0.014282	0.010776
0.281594	0.685183	0.018734	0.014489
0.027265	0.017091	0.955644	0.0
0.0	0.952317	0.04606	0.001623
0.907481	0.043663	0.033261	0.015596
0.0	0.049737	0.941135	0.009127
0.171272	0.0	0.692425	0.136303

MOTIF	Midbrain_E15.5_H3K4me3_102_87_0.505_1.681694e-08
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.495914	0.04831	0.172312	0.283463
0.107418	0.732068	0.102269	0.058245
0.169866	0.79558	0.010723	0.023831
0.229471	0.729463	0.019707	0.021359
0.305556	0.605423	0.0	0.089021
0.014532	0.043462	0.93795	0.004057
0.0	0.948247	0.045389	0.006364
0.88813	0.04355	0.040643	0.027676
0.0	0.011959	0.978959	0.009081
0.119193	0.0	0.842633	0.038174
0.395119	0.0	0.329832	0.275049

MOTIF	Heart_E13.5_H3K4me3_64_85_0.580_4.316935e-231
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.686975	0.02813	0.284894
0.298541	0.609098	0.030723	0.061638
0.038117	0.850716	0.071709	0.039458
0.018385	0.89078	0.011901	0.078934
0.008276	0.081311	0.909069	0.001344
0.0	0.645	0.355	0.0
0.899946	0.0	0.05372	0.046334
0.0	0.0	1.0	0.0
0.181511	0.0	0.807949	0.01054

MOTIF	Limb_E14.5_H3K4me3_74_53_0.582_2.747117e-242
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.000182	0.952262	0.047556	0.0
0.185218	0.099988	0.078739	0.636055
0.007762	0.059221	0.920065	0.012953
0.019849	0.850832	0.015385	0.113935
0.196647	0.02061	0.764501	0.018242
0.13319	0.051569	0.684256	0.130985
0.141207	0.138103	0.648551	0.07214
0.010835	0.071742	0.896997	0.020426
0.892142	0.021372	0.024214	0.062272

MOTIF	Hindbrain_E14.5_H3K4me3_75_68_0.539_5.193685e-62
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.016389	0.951777	0.031834	0.0
0.171576	0.073181	0.04682	0.708422
0.007117	0.068065	0.905724	0.019094
0.019348	0.797815	0.015416	0.167421
0.200392	0.0	0.673477	0.126131
0.030792	0.069215	0.801572	0.098422
0.209937	0.015687	0.698466	0.07591
0.112715	0.021559	0.851241	0.014485
0.832526	0.077711	0.017283	0.07248

MOTIF	Stomach_E15.5_H3K4me3_72_71_0.561_8.259246e-125
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.94989	0.038359	0.011751
0.097552	0.033095	0.031202	0.838151
0.017532	0.156443	0.812679	0.013345
0.011215	0.9179	0.034169	0.036716
0.165678	0.048131	0.705006	0.081185
0.026766	0.085178	0.735862	0.152194
0.125405	0.030916	0.785367	0.058312
0.162182	0.035969	0.769904	0.031945
0.803073	0.065787	0.011965	0.119175

MOTIF	Midbrain_P0_H3K9ac_79_89_0.526_2.030051e-95
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.831419	0.0	0.0	0.168581
0.143864	0.789256	0.0	0.06688
0.029305	0.87762	0.093075	0.0
0.047702	0.900331	0.0	0.051967
0.037598	0.025273	0.898265	0.038864
0.0	1.0	0.0	0.0
0.919987	0.013309	0.028242	0.038462
0.0	0.206291	0.793709	0.0
0.025309	0.0	0.377155	0.597536